RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 GNRH2O43555 120 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 DUSP14O95147 198 aaKnown RBP2.95□□□□□ -1.94
SPG11-211ENST00000558561 PTTG1O95997 202 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 DEFB130BP0DP73 79 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 DEFB130AP0DP74 79 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 CXCL2P19875 107 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 FHITP49789 147 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 MEOX2P50222 304 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 ZNF80P51504 273 aaPredicted RBP2.95□□□□□ -1.94
SPG11-211ENST00000558561 FGF8P55075 233 aaPredicted RBP2.95□□□□□ -1.94
SPG11-211ENST00000558561 HBG1P69891 147 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 HBG2P69892 147 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 RAB31Q13636 194 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 RRN3P1Q2M238 152 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 LCN15Q6UWW0 184 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 ZFAND2AQ8N6M9 145 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 OR10G4Q8NGN3 311 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 OR10G9Q8NGN4 311 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 OR10G7Q8NGN6 311 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 OR1L4Q8NGR5 311 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 OR2T35Q8NGX2 323 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 Q8TAT8 98 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 SCGB1C1Q8TD33 95 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 HYLS1Q96M11 299 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 GPR82Q96P67 336 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 Q9H3A6 140 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 C11orf68Q9H3H3 251 aaKnown RBP2.95□□□□□ -1.94
SPG11-211ENST00000558561 NOP10Q9NPE3 64 aaKnown RBP2.95□□□□□ -1.94
SPG11-211ENST00000558561 GSN-AS1Q9NRJ2 163 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 TMEM14CQ9P0S9 112 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 TNFSF18Q9UNG2 199 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 KLK5Q9Y337 293 aaPredicted RBP2.95□□□□□ -1.94
SPG11-211ENST00000558561 TIMM9Q9Y5J7 89 aa2.95□□□□□ -1.94
SPG11-211ENST00000558561 IGLV2-18A0A075B6J9 118 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 FXYD6-FXYD2A0A087WZ82 144 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 TRAV34A0A0B4J273 112 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 BOLA2-SMG1P6H3BVE0 249 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 ARPC5O15511 151 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 OR7C2O60412 319 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 MPDU1O75352 247 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 CDK2AP2O75956 126 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 IFNA5P01569 189 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 HBE1P02100 147 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 SPART-AS1P0CW21 52 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 CDKN1BP46527 198 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 NUTF2P61970 127 aaKnown RBP2.94□□□□□ -1.94
SPG11-211ENST00000558561 ZNF266Q14584 549 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 RGS21Q2M5E4 152 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 MUC21Q5SSG8 566 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.94□□□□□ -1.94
SPG11-211ENST00000558561 Q6ZTI0 123 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 KRTAP7-1Q8IUC3 87 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 AQP10Q96PS8 301 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 PFDN5Q99471 154 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 SLC50A1Q9BRV3 221 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 NIPSNAP3BQ9BS92 247 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 TMEM208Q9BTX3 173 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 GFRA4Q9GZZ7 299 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 RPH3ALQ9UNE2 315 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 GOLT1BQ9Y3E0 138 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 HECTD4Q9Y4D8 3996 aa2.94□□□□□ -1.94
SPG11-211ENST00000558561 TRAV10A0A0B4J240 114 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 A0A0J9YY99 117 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 A0A1B0GV50 99 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 SMIM9A6NGZ8 99 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 SNURFLB1AK76 121 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 KLLNB2CW77 178 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 F5H768 121 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 INSP01308 110 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 IGHV3-53P01767 116 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 GIPP09681 153 aaPredicted RBP2.93□□□□□ -1.94
SPG11-211ENST00000558561 STAG3L2P0CL84 134 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 STAG3L3P0CL85 134 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 ARL14EPLP0DKL9 152 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 M6PRP20645 277 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 NUP62P37198 522 aaPredicted RBP2.93□□□□□ -1.94
SPG11-211ENST00000558561 CRIP1P50238 77 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 KRTAP10-6P60371 365 aaPredicted RBP2.93□□□□□ -1.94
SPG11-211ENST00000558561 KRTAP10-7P60409 375 aaPredicted RBP2.93□□□□□ -1.94
SPG11-211ENST00000558561 UBE2G2P60604 165 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 CCL20P78556 96 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 LGALSLQ3ZCW2 172 aaPredicted RBP2.93□□□□□ -1.94
SPG11-211ENST00000558561 ZC2HC1BQ5TFG8 222 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 LGALS9CQ6DKI2 356 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 GOLT1AQ6ZVE7 132 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 POM121L12Q8N7R1 296 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 TMEM75Q8N9X5 138 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 C11orf72Q8NBR9 251 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 OR10J6PQ8NGY7 276 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 OR2G3Q8NGZ4 309 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 RNASE8Q8TDE3 154 aaKnown RBP2.93□□□□□ -1.94
SPG11-211ENST00000558561 LINC00477Q96M19 166 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 ZNF492Q9P255 531 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 Q9UF83 564 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 DNAH11Q96DT5 4516 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 BIRC6Q9NR09 4857 aa2.93□□□□□ -1.94
SPG11-211ENST00000558561 PKD1P98161 4303 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 FAT2Q9NYQ8 4349 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 A0A1W2PPV4 95 aa2.92□□□□□ -1.94
SPG11-211ENST00000558561 C7orf71A4D174 169 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms