RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 KIAA1107Q9UPP5 1409 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 MXRA5Q9NR99 2828 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 ZNF142P52746 1687 aaPredicted RBP-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 CXorf51AA0A1B0GTR3 108 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 A0A1B0GW64 132 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 TMEM30CPA0ZSE6 113 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 RIIAD1A6NNX1 92 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 HIGD1CA8MV81 97 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 G3V2T6 193 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 GABARAPH6UMI1 98 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 H7C1C5 153 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 KPNA4O00629 521 aaPredicted RBP-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 LYRM1O43325 122 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 NDUFC2O95298 119 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 TRACP01848 142 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 IFNA6P05013 189 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 IFNA4P05014 189 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 CCKP06307 115 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 PYYP10082 97 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 BCL2P10415 239 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 FABP2P12104 132 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 IFITM1P13164 125 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 HSD11B1P28845 292 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 ARF6P62330 175 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 LCN6P62502 163 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 BASP1P80723 227 aaKnown RBP-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 RPL19P84098 196 aaKnown RBP-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 COX6A2Q02221 97 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 RTL8BQ17RB0 113 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 KRTAP20-2Q3LI61 65 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 DHRS4L2Q6PKH6 230 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 TCTEX1D1Q8N7M0 179 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 NAT14Q8WUY8 206 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 PPP1R14BQ96C90 147 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 Q96NJ1 140 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 CIB3Q96Q77 187 aaPredicted RBP-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 GINS3Q9BRX5 216 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 RTL8AQ9BWD3 113 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 OR2H1Q9GZK4 316 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 SH3BGRL3Q9H299 93 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 NMNAT1Q9HAN9 279 aaPredicted RBP-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 PYCARDQ9ULZ3 195 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 LAMC1P11047 1609 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 MYH8P13535 1937 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 DNAJC13O75165 2243 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 DOCK1Q14185 1865 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 CDK5RAP2Q96SN8 1893 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 PTPRMP28827 1452 aa-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 SIPA1L3O60292 1781 aaPredicted RBP-0.29□□□□□ -2.46
FOXN3-216ENST00000557496 BLMP54132 1417 aaPredicted RBP-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 TRAPPC8Q9Y2L5 1435 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 RYR3Q15413 4870 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 NRXN2Q9P2S2 1712 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 GOLGA4Q13439 2230 aaKnown RBP-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 BIVM-ERCC5R4GMW8 1640 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 TRDV1A0A1B0GX56 115 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 TMEM189A5PLL7 270 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 C9JAW5 83 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 G3V318 75 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 M0QZK8 103 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 TPST1O60507 370 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 EDF1O60869 148 aaKnown RBP-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 ATG12O94817 140 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 IFNA14P01570 189 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 RPL7P18124 248 aaKnown RBP-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 S100A11P31949 105 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 GTF2A1P52655 376 aaPredicted RBP-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 CEBPGP53567 150 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 NDUFA6P56556 154 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 TAS2R41P59536 307 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 MAXP61244 160 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 NPC2P61916 151 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 BLCAPP62952 87 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 GNG3P63215 75 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 HAMPP81172 84 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 MRPS36P82909 103 aaKnown RBP-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 RHOHQ15669 191 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 RGS21Q2M5E4 152 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 AKR1C8PQ5T2L2 129 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 Q5XG85 94 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 C3orf62Q6ZUJ4 267 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 SSBP3-AS1Q7Z2R9 100 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 STX19Q8N4C7 294 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 MORN4Q8NDC4 146 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 NUP35Q8NFH5 326 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 OR51A4Q8NGJ6 313 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 OR5H6Q8NGV6 325 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 OR5AK2Q8NH90 309 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 GRPEL2Q8TAA5 225 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 ISOC1Q96CN7 298 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 BTF3L4Q96K17 158 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 PRELID3AQ96N28 172 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 PHB2Q99623 299 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 LYSTQ99698 3801 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 HOPXQ9BPY8 73 aaPredicted RBP-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 PRR15LQ9BU68 103 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 CNFNQ9BYD5 112 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 PARVGQ9HBI0 331 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 BIN3Q9NQY0 253 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 CBLN4Q9NTU7 201 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms