RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 THAP6Q8TBB0 222 aa8.13□□□□□ -1.11
SNX6-209ENST00000557265 C2orf50Q96LR7 162 aa8.13□□□□□ -1.11
SNX6-209ENST00000557265 PLA2G2DQ9UNK4 145 aa8.13□□□□□ -1.11
SNX6-209ENST00000557265 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.12□□□□□ -1.11
SNX6-209ENST00000557265 OXTP01178 125 aa8.12□□□□□ -1.11
SNX6-209ENST00000557265 LAGE3Q14657 143 aa8.12□□□□□ -1.11
SNX6-209ENST00000557265 CNPY1Q3B7I2 92 aa8.12□□□□□ -1.11
SNX6-209ENST00000557265 PRADC1Q9BSG0 188 aa8.12□□□□□ -1.11
SNX6-209ENST00000557265 LENEPQ9Y5L5 61 aa8.12□□□□□ -1.11
SNX6-209ENST00000557265 CCDC160A6NGH7 325 aa8.11□□□□□ -1.11
SNX6-209ENST00000557265 FBLL1A6NHQ2 334 aaKnown RBP8.11□□□□□ -1.11
SNX6-209ENST00000557265 DIRC3C9JPN6 131 aa8.11□□□□□ -1.11
SNX6-209ENST00000557265 KRTAP10-4P60372 401 aaPredicted RBP8.11□□□□□ -1.11
SNX6-209ENST00000557265 RAB32Q13637 225 aa8.11□□□□□ -1.11
SNX6-209ENST00000557265 Q8N3U1 123 aa8.11□□□□□ -1.11
SNX6-209ENST00000557265 SDHCQ99643 169 aaPredicted RBP8.11□□□□□ -1.11
SNX6-209ENST00000557265 SEC22CQ9BRL7 303 aa8.11□□□□□ -1.11
SNX6-209ENST00000557265 IGHV3-73A0A0B4J1V6 119 aa8.1□□□□□ -1.11
SNX6-209ENST00000557265 TRBV6-4A0A1B0GX49 114 aa8.1□□□□□ -1.11
SNX6-209ENST00000557265 OR7C2O60412 319 aa8.1□□□□□ -1.11
SNX6-209ENST00000557265 TYMSP04818 313 aa8.1□□□□□ -1.11
SNX6-209ENST00000557265 IL15RAQ13261 267 aa8.1□□□□□ -1.11
SNX6-209ENST00000557265 RHOHQ15669 191 aa8.1□□□□□ -1.11
SNX6-209ENST00000557265 BAALCQ8WXS3 180 aa8.1□□□□□ -1.11
SNX6-209ENST00000557265 HYLS1Q96M11 299 aa8.1□□□□□ -1.11
SNX6-209ENST00000557265 GTSF1LQ9H1H1 148 aa8.1□□□□□ -1.11
SNX6-209ENST00000557265 SDF2L1Q9HCN8 221 aa8.1□□□□□ -1.11
SNX6-209ENST00000557265 FAT3Q8TDW7 4589 aa8.09□□□□□ -1.11
SNX6-209ENST00000557265 TRAV6A0A075B6T7 132 aa8.09□□□□□ -1.11
SNX6-209ENST00000557265 TRAV8-3A0A0A6YYJ7 113 aa8.09□□□□□ -1.11
SNX6-209ENST00000557265 TRAV21A0A0B4J279 112 aa8.09□□□□□ -1.11
SNX6-209ENST00000557265 UBE2L3P68036 154 aaKnown RBP8.09□□□□□ -1.11
SNX6-209ENST00000557265 NHLH2Q02577 135 aa8.09□□□□□ -1.11
SNX6-209ENST00000557265 ZNF876PQ49A33 203 aa8.09□□□□□ -1.11
SNX6-209ENST00000557265 CFAP126Q5VTH2 177 aa8.09□□□□□ -1.11
SNX6-209ENST00000557265 OR5C1Q8NGR4 320 aa8.09□□□□□ -1.11
SNX6-209ENST00000557265 ATP6V0E2Q8NHE4 81 aa8.09□□□□□ -1.11
SNX6-209ENST00000557265 TMED6Q8WW62 240 aa8.09□□□□□ -1.11
SNX6-209ENST00000557265 ATP5SQ99766 215 aa8.09□□□□□ -1.11
SNX6-209ENST00000557265 CHAC1Q9BUX1 264 aa8.09□□□□□ -1.11
SNX6-209ENST00000557265 RBFOX3A6NFN3 312 aa8.08□□□□□ -1.12
SNX6-209ENST00000557265 F6UZH7 168 aa8.08□□□□□ -1.12
SNX6-209ENST00000557265 RS1O15537 224 aa8.08□□□□□ -1.12
SNX6-209ENST00000557265 IL7P13232 177 aa8.08□□□□□ -1.12
SNX6-209ENST00000557265 DPPA3Q6W0C5 159 aa8.08□□□□□ -1.12
SNX6-209ENST00000557265 ASB13Q8WXK3 278 aa8.08□□□□□ -1.12
SNX6-209ENST00000557265 RPH3ALQ9UNE2 315 aa8.08□□□□□ -1.12
SNX6-209ENST00000557265 PLA2G10O15496 165 aa8.07□□□□□ -1.12
SNX6-209ENST00000557265 CIDEAO60543 219 aa8.07□□□□□ -1.12
SNX6-209ENST00000557265 TCRBP04435 133 aa8.07□□□□□ -1.12
SNX6-209ENST00000557265 DAZ4Q86SG3 579 aaKnown RBP8.07□□□□□ -1.12
SNX6-209ENST00000557265 CIRBP-AS1Q8TBR5 109 aa8.07□□□□□ -1.12
SNX6-209ENST00000557265 TVP23CQ96ET8 276 aa8.07□□□□□ -1.12
SNX6-209ENST00000557265 KCNS1Q96KK3 526 aa8.07□□□□□ -1.12
SNX6-209ENST00000557265 TREM1Q9NP99 234 aa8.07□□□□□ -1.12
SNX6-209ENST00000557265 DAZ3Q9NR90 486 aaKnown RBP8.07□□□□□ -1.12
SNX6-209ENST00000557265 KCNIP2Q9NS61 270 aa8.07□□□□□ -1.12
SNX6-209ENST00000557265 PGPA6NDG6 321 aa8.06□□□□□ -1.12
SNX6-209ENST00000557265 ASAH1Q13510 395 aa8.06□□□□□ -1.12
SNX6-209ENST00000557265 TOR2AQ5JU69 321 aa8.06□□□□□ -1.12
SNX6-209ENST00000557265 GOLT1AQ6ZVE7 132 aa8.06□□□□□ -1.12
SNX6-209ENST00000557265 Q8N976 141 aa8.06□□□□□ -1.12
SNX6-209ENST00000557265 CMTM2Q8TAZ6 248 aa8.06□□□□□ -1.12
SNX6-209ENST00000557265 NMES1Q9C002 83 aa8.06□□□□□ -1.12
SNX6-209ENST00000557265 WDR61Q9GZS3 305 aaKnown RBP8.06□□□□□ -1.12
SNX6-209ENST00000557265 OTORQ9NRC9 128 aa8.06□□□□□ -1.12
SNX6-209ENST00000557265 NUDT15Q9NV35 164 aa8.06□□□□□ -1.12
SNX6-209ENST00000557265 TRAV8-1A0A0A6YYK1 113 aa8.05□□□□□ -1.12
SNX6-209ENST00000557265 GGTLC3B5MD39 225 aa8.05□□□□□ -1.12
SNX6-209ENST00000557265 C17orf112F2Z3M2 114 aa8.05□□□□□ -1.12
SNX6-209ENST00000557265 LYRM1O43325 122 aa8.05□□□□□ -1.12
SNX6-209ENST00000557265 MGST1P10620 155 aaKnown RBP8.05□□□□□ -1.12
SNX6-209ENST00000557265 COX11Q9Y6N1 276 aa8.05□□□□□ -1.12
SNX6-209ENST00000557265 RNF222A6NCQ9 220 aa8.04□□□□□ -1.12
SNX6-209ENST00000557265 GAGE12JA6NER3 117 aa8.04□□□□□ -1.12
SNX6-209ENST00000557265 PGPEP1LA6NFU8 196 aa8.04□□□□□ -1.12
SNX6-209ENST00000557265 EIF3GO75821 320 aaKnown RBP eCLIP8.04□□□□□ -1.12
SNX6-209ENST00000557265 GAGE1Q13065 139 aa8.04□□□□□ -1.12
SNX6-209ENST00000557265 GAGE4Q13068 117 aa8.04□□□□□ -1.12
SNX6-209ENST00000557265 GAGE5Q13069 117 aa8.04□□□□□ -1.12
SNX6-209ENST00000557265 ACOT6Q3I5F7 207 aaPredicted RBP8.04□□□□□ -1.12
SNX6-209ENST00000557265 GAGE13Q4V321 117 aa8.04□□□□□ -1.12
SNX6-209ENST00000557265 KHDC3LQ587J8 217 aa8.04□□□□□ -1.12
SNX6-209ENST00000557265 SH3BGRL3Q9H299 93 aa8.04□□□□□ -1.12
SNX6-209ENST00000557265 C11orf21Q9P2W6 132 aa8.04□□□□□ -1.12
SNX6-209ENST00000557265 MBD2Q9UBB5 411 aa8.04□□□□□ -1.12
SNX6-209ENST00000557265 RNF213Q63HN8 5207 aa8.03□□□□□ -1.12
SNX6-209ENST00000557265 IGLV2-8P01709 118 aa8.03□□□□□ -1.12
SNX6-209ENST00000557265 H2AFB2P0C5Z0 115 aa8.03□□□□□ -1.12
SNX6-209ENST00000557265 TAS2R45P59539 299 aa8.03□□□□□ -1.12
SNX6-209ENST00000557265 ZNF506Q5JVG8 444 aa8.03□□□□□ -1.12
SNX6-209ENST00000557265 FFAR4Q5NUL3 377 aa8.03□□□□□ -1.12
SNX6-209ENST00000557265 FAM74A1Q5RGS3 127 aa8.03□□□□□ -1.12
SNX6-209ENST00000557265 RMI2Q96E14 147 aa8.03□□□□□ -1.12
SNX6-209ENST00000557265 DNAJC30Q96LL9 226 aa8.03□□□□□ -1.12
SNX6-209ENST00000557265 RBM38Q9H0Z9 239 aaKnown RBP8.03□□□□□ -1.12
SNX6-209ENST00000557265 IGKV2D-24A0A075B6R9 120 aa8.02□□□□□ -1.13
SNX6-209ENST00000557265 GNG5P63218 68 aa8.02□□□□□ -1.13
SNX6-209ENST00000557265 SGK494Q96LW2 274 aa8.02□□□□□ -1.13
SNX6-209ENST00000557265 C9orf85Q96MD7 179 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms