RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 H3BVH4 76 aa14.01□□□□□ -0.17
PRPF40B-208ENST00000548436 PLA2G2AP14555 144 aa14.01□□□□□ -0.17
PRPF40B-208ENST00000548436 SRD5A1P18405 259 aa14.01□□□□□ -0.17
PRPF40B-208ENST00000548436 IGHV4-4A0A075B6R2 117 aa14□□□□□ -0.17
PRPF40B-208ENST00000548436 LINC01546A6NGU7 62 aa14□□□□□ -0.17
PRPF40B-208ENST00000548436 J3QLI3 93 aa14□□□□□ -0.17
PRPF40B-208ENST00000548436 FAM19A4Q96LR4 140 aa14□□□□□ -0.17
PRPF40B-208ENST00000548436 UBR5O95071 2799 aaPredicted RBP14□□□□□ -0.17
PRPF40B-208ENST00000548436 CENPEQ02224 2701 aa14□□□□□ -0.17
PRPF40B-208ENST00000548436 MS4A6AQ9H2W1 248 aa14□□□□□ -0.17
PRPF40B-208ENST00000548436 RNF223E7ERA6 249 aa13.99□□□□□ -0.17
PRPF40B-208ENST00000548436 KIR3DS1Q14943 382 aa13.99□□□□□ -0.17
PRPF40B-208ENST00000548436 SPANXN1Q5VSR9 72 aa13.99□□□□□ -0.17
PRPF40B-208ENST00000548436 LRRK2Q5S007 2527 aa13.99□□□□□ -0.17
PRPF40B-208ENST00000548436 J3QKU1 62 aa13.99□□□□□ -0.17
PRPF40B-208ENST00000548436 K7EMT4 169 aa13.99□□□□□ -0.17
PRPF40B-208ENST00000548436 KRTAP10-9P60411 292 aa13.99□□□□□ -0.17
PRPF40B-208ENST00000548436 SLC25A34Q6PIV7 304 aa13.99□□□□□ -0.17
PRPF40B-208ENST00000548436 TMEM208Q9BTX3 173 aa13.99□□□□□ -0.17
PRPF40B-208ENST00000548436 UFC1Q9Y3C8 167 aa13.99□□□□□ -0.17
PRPF40B-208ENST00000548436 GOLT1BQ9Y3E0 138 aa13.99□□□□□ -0.17
PRPF40B-208ENST00000548436 TRAV26-2A0A0B4J265 109 aa13.98□□□□□ -0.17
PRPF40B-208ENST00000548436 TRAV21A0A0B4J279 112 aa13.98□□□□□ -0.17
PRPF40B-208ENST00000548436 CACNG7P62955 275 aa13.98□□□□□ -0.17
PRPF40B-208ENST00000548436 LGALS9BQ3B8N2 356 aa13.98□□□□□ -0.17
PRPF40B-208ENST00000548436 LGALS9CQ6DKI2 356 aa13.98□□□□□ -0.17
PRPF40B-208ENST00000548436 IFI27L1Q96BM0 104 aa13.98□□□□□ -0.17
PRPF40B-208ENST00000548436 SMIM15Q7Z3B0 74 aa13.97□□□□□ -0.17
PRPF40B-208ENST00000548436 WFDC3Q8IUB2 231 aa13.97□□□□□ -0.17
PRPF40B-208ENST00000548436 NXT2Q9NPJ8 142 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-208ENST00000548436 DOPEY2Q9Y3R5 2298 aa13.97□□□□□ -0.17
PRPF40B-208ENST00000548436 IGLV2-18A0A075B6J9 118 aa13.97□□□□□ -0.17
PRPF40B-208ENST00000548436 SPRY2O43597 315 aa13.97□□□□□ -0.17
PRPF40B-208ENST00000548436 RNASE4P34096 147 aaKnown RBP13.97□□□□□ -0.17
PRPF40B-208ENST00000548436 LEPP41159 167 aa13.97□□□□□ -0.17
PRPF40B-208ENST00000548436 NRACQ8N912 160 aa13.97□□□□□ -0.17
PRPF40B-208ENST00000548436 OR2K2Q8NGT1 345 aa13.97□□□□□ -0.17
PRPF40B-208ENST00000548436 APRG1Q8IVJ8 170 aa13.96□□□□□ -0.17
PRPF40B-208ENST00000548436 IGHV4-31P0DP07 118 aa13.95□□□□□ -0.18
PRPF40B-208ENST00000548436 FCER1GP30273 86 aa13.95□□□□□ -0.18
PRPF40B-208ENST00000548436 ANXA2RQ3ZCQ2 193 aa13.95□□□□□ -0.18
PRPF40B-208ENST00000548436 DCANP1Q8TF63 244 aa13.95□□□□□ -0.18
PRPF40B-208ENST00000548436 DLEU1O43261 78 aa13.95□□□□□ -0.18
PRPF40B-208ENST00000548436 FSHBP01225 129 aa13.95□□□□□ -0.18
PRPF40B-208ENST00000548436 Q8N8P6 123 aa13.95□□□□□ -0.18
PRPF40B-208ENST00000548436 C18orf15Q96N68 181 aa13.95□□□□□ -0.18
PRPF40B-208ENST00000548436 VPREB3Q9UKI3 123 aa13.94□□□□□ -0.18
PRPF40B-208ENST00000548436 PTPN13Q12923 2485 aa13.94□□□□□ -0.18
PRPF40B-208ENST00000548436 TMEM89A2RUT3 159 aa13.94□□□□□ -0.18
PRPF40B-208ENST00000548436 ANKRD39Q53RE8 183 aa13.94□□□□□ -0.18
PRPF40B-208ENST00000548436 MXRA5Q9NR99 2828 aa13.94□□□□□ -0.18
PRPF40B-208ENST00000548436 COX8AP10176 69 aa13.93□□□□□ -0.18
PRPF40B-208ENST00000548436 MPV17L2Q567V2 206 aa13.93□□□□□ -0.18
PRPF40B-208ENST00000548436 TRBV7-9A0A0J9YWB2 115 aa13.92□□□□□ -0.18
PRPF40B-208ENST00000548436 PRSS47A8MTI9 375 aa13.92□□□□□ -0.18
PRPF40B-208ENST00000548436 M0R381 172 aa13.92□□□□□ -0.18
PRPF40B-208ENST00000548436 GNRH2O43555 120 aa13.92□□□□□ -0.18
PRPF40B-208ENST00000548436 S100A4P26447 101 aaKnown RBP13.92□□□□□ -0.18
PRPF40B-208ENST00000548436 ASIPP42127 132 aa13.92□□□□□ -0.18
PRPF40B-208ENST00000548436 Q6YL49 198 aa13.92□□□□□ -0.18
PRPF40B-208ENST00000548436 MUC4Q99102 2169 aa13.92□□□□□ -0.18
PRPF40B-208ENST00000548436 DEFB125Q8N687 156 aa13.92□□□□□ -0.18
PRPF40B-208ENST00000548436 TMEM158Q8WZ71 300 aa13.92□□□□□ -0.18
PRPF40B-208ENST00000548436 DKK2Q9UBU2 259 aa13.92□□□□□ -0.18
PRPF40B-208ENST00000548436 ID1P41134 155 aa13.91□□□□□ -0.18
PRPF40B-208ENST00000548436 GAGE1Q13065 139 aa13.91□□□□□ -0.18
PRPF40B-208ENST00000548436 Q6ZVH6 145 aa13.91□□□□□ -0.18
PRPF40B-208ENST00000548436 DPF1Q92782 380 aa13.91□□□□□ -0.18
PRPF40B-208ENST00000548436 NUDT3O95989 172 aa13.91□□□□□ -0.18
PRPF40B-208ENST00000548436 NPSP0C0P6 89 aa13.91□□□□□ -0.18
PRPF40B-208ENST00000548436 RNASE3P12724 160 aaKnown RBP13.91□□□□□ -0.18
PRPF40B-208ENST00000548436 ZNF702PQ9H963 129 aa13.91□□□□□ -0.18
PRPF40B-208ENST00000548436 PHLDA3Q9Y5J5 127 aa13.91□□□□□ -0.18
PRPF40B-208ENST00000548436 PRRC2AP48634 2157 aaKnown RBP13.9□□□□□ -0.18
PRPF40B-208ENST00000548436 KLLNB2CW77 178 aa13.9□□□□□ -0.18
PRPF40B-208ENST00000548436 CD5LO43866 347 aa13.9□□□□□ -0.18
PRPF40B-208ENST00000548436 WFDC12Q8WWY7 111 aa13.9□□□□□ -0.18
PRPF40B-208ENST00000548436 MRAP2Q96G30 205 aa13.9□□□□□ -0.18
PRPF40B-208ENST00000548436 HOXA3O43365 443 aaPredicted RBP13.89□□□□□ -0.19
PRPF40B-208ENST00000548436 FGF6P10767 208 aa13.89□□□□□ -0.19
PRPF40B-208ENST00000548436 DEFB113Q30KQ7 82 aa13.89□□□□□ -0.19
PRPF40B-208ENST00000548436 C2orf91Q6ZV80 131 aa13.89□□□□□ -0.19
PRPF40B-208ENST00000548436 BEX4Q9NWD9 120 aaPredicted RBP13.89□□□□□ -0.19
PRPF40B-208ENST00000548436 ABCA12Q86UK0 2595 aa13.89□□□□□ -0.19
PRPF40B-208ENST00000548436 TEX15Q9BXT5 2789 aa13.89□□□□□ -0.19
PRPF40B-208ENST00000548436 MED14OSP0DP75 135 aa13.89□□□□□ -0.19
PRPF40B-208ENST00000548436 TCTAP57738 103 aa13.89□□□□□ -0.19
PRPF40B-208ENST00000548436 Q5PR19 223 aa13.89□□□□□ -0.19
PRPF40B-208ENST00000548436 BVES-AS1Q5T3Y7 98 aa13.88□□□□□ -0.19
PRPF40B-208ENST00000548436 C14orf178Q8N769 122 aaPredicted RBP13.88□□□□□ -0.19
PRPF40B-208ENST00000548436 OR1N2Q8NGR9 330 aa13.88□□□□□ -0.19
PRPF40B-208ENST00000548436 MYOZ3Q8TDC0 251 aa13.88□□□□□ -0.19
PRPF40B-208ENST00000548436 HELZ2Q9BYK8 2649 aaKnown RBP13.88□□□□□ -0.19
PRPF40B-208ENST00000548436 AGRNO00468 2067 aa13.88□□□□□ -0.19
PRPF40B-208ENST00000548436 IGHV4OR15-8A0A075B7B6 117 aa13.87□□□□□ -0.19
PRPF40B-208ENST00000548436 A0A087WW49 117 aa13.87□□□□□ -0.19
PRPF40B-208ENST00000548436 LGALS1P09382 135 aaKnown RBP13.87□□□□□ -0.19
PRPF40B-208ENST00000548436 ZNF688P0C7X2 276 aa13.87□□□□□ -0.19
PRPF40B-208ENST00000548436 SYNJ2BPP57105 145 aa13.87□□□□□ -0.19
PRPF40B-208ENST00000548436 LAGE3Q14657 143 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms