RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 ORMDL3Q8N138 153 aa3.87□□□□□ -1.79
UBE4A-203ENST00000545354 C20orf197Q8N268 126 aa3.87□□□□□ -1.79
UBE4A-203ENST00000545354 RNASE6Q93091 150 aaKnown RBP3.87□□□□□ -1.79
UBE4A-203ENST00000545354 GPHA2Q96T91 129 aa3.87□□□□□ -1.79
UBE4A-203ENST00000545354 ZNF355PQ9NSJ1 428 aa3.87□□□□□ -1.79
UBE4A-203ENST00000545354 U3KQK5 164 aa3.87□□□□□ -1.79
UBE4A-203ENST00000545354 LTBP2Q14767 1821 aa3.87□□□□□ -1.79
UBE4A-203ENST00000545354 CFAP47Q6ZTR5 3102 aa3.87□□□□□ -1.79
UBE4A-203ENST00000545354 MYO15AQ9UKN7 3530 aa3.87□□□□□ -1.79
UBE4A-203ENST00000545354 WDR87Q6ZQQ6 2873 aa3.87□□□□□ -1.79
UBE4A-203ENST00000545354 KIAA1671Q9BY89 1806 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 A0A087X002 238 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 A0A1B0GUT8 65 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 A0A1B0GVT2 93 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 TMEM30CPA0ZSE6 113 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 E7EQL1 145 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 ERC2-IT1O76042 136 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 IGHV3-33P01772 117 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 FGF12P61328 243 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 Q0VFX4 171 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 C16orf47Q6ZP98 133 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-203ENST00000545354 NOTCH2NLQ7Z3S9 236 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 VMO1Q7Z5L0 202 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 ZFHX2Q9C0A1 2572 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-203ENST00000545354 MYO9BQ13459 2157 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 COL11A1P12107 1806 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-203ENST00000545354 LINC01548A6NM66 108 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 SMIM22K7EJ46 135 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 PRYO14603 147 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 TRIAP1O43715 76 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 IGLV2-8P01709 118 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 LPAL2Q16609 132 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 Q1RN00 199 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 ASB16-AS1Q495Z4 193 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-203ENST00000545354 FAM19A3Q7Z5A8 133 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 FAM223AQ8IWN6 122 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 DYNAPQ8N1N2 210 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-203ENST00000545354 DKK2Q9UBU2 259 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 TIMM8BQ9Y5J9 83 aaPredicted RBP3.86□□□□□ -1.79
UBE4A-203ENST00000545354 NLRC5Q86WI3 1866 aa3.86□□□□□ -1.79
UBE4A-203ENST00000545354 CHD8Q9HCK8 2581 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 CACNA1BQ00975 2339 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 VPS13AQ96RL7 3174 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 IGLV3-32A0A0A0MS00 114 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 PSPHP1O15172 72 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 SH2D1AO60880 128 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 FXYD4P59646 89 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 LYPD5Q6UWN5 251 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 FAM72BQ86X60 149 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 CYYR1Q96J86 154 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 KRTAP4-8Q9BYQ9 185 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 UBE2D4Q9Y2X8 147 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 GREB1Q4ZG55 1949 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 F5H697 171 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 BGLAPP02818 100 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 SAA1P0DJI8 122 aaPredicted RBP3.85□□□□□ -1.79
UBE4A-203ENST00000545354 CCL4P13236 92 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 CCL14Q16627 93 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 Q6ZR03 302 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 PFN4Q8NHR9 129 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 LINC00474Q9P2X8 69 aa3.85□□□□□ -1.79
UBE4A-203ENST00000545354 TMEM223A0PJW6 202 aa3.84□□□□□ -1.79
UBE4A-203ENST00000545354 ZNF815PA8K554 130 aa3.84□□□□□ -1.79
UBE4A-203ENST00000545354 KLLNB2CW77 178 aa3.84□□□□□ -1.79
UBE4A-203ENST00000545354 F8VRH5 84 aa3.84□□□□□ -1.79
UBE4A-203ENST00000545354 K7EMI3 77 aa3.84□□□□□ -1.79
UBE4A-203ENST00000545354 PPP1R11O60927 126 aaPredicted RBP3.84□□□□□ -1.79
UBE4A-203ENST00000545354 FSTL3O95633 263 aa3.84□□□□□ -1.79
UBE4A-203ENST00000545354 NSUN5P1Q3KNT7 163 aa3.84□□□□□ -1.79
UBE4A-203ENST00000545354 GGNQ86UU5 652 aa3.84□□□□□ -1.79
UBE4A-203ENST00000545354 MAPKAPK5-AS1Q8N8E1 139 aa3.84□□□□□ -1.79
UBE4A-203ENST00000545354 MPLKIPQ8TAP9 179 aa3.84□□□□□ -1.79
UBE4A-203ENST00000545354 PCSK5Q92824 1860 aa3.84□□□□□ -1.79
UBE4A-203ENST00000545354 PKD1L2Q7Z442 2459 aa3.84□□□□□ -1.79
UBE4A-203ENST00000545354 DMDP11532 3685 aa3.84□□□□□ -1.79
UBE4A-203ENST00000545354 PLXNB2O15031 1838 aa3.84□□□□□ -1.8
UBE4A-203ENST00000545354 BAHCC1Q9P281 2608 aa3.84□□□□□ -1.8
UBE4A-203ENST00000545354 A0A096LNJ9 63 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 A0A1B0GW54 56 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 DNAL4O96015 105 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 KRTAP27-1Q3LI81 207 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 SPANXN1Q5VSR9 72 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 PSMG3-AS1Q96PY0 264 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 CYP4F30PQ9H0H9 118 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 PHLDA3Q9Y5J5 127 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 ANAPC1Q9H1A4 1944 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 DNAH14Q0VDD8 3507 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 IGLV1-36A0A0B4J1U3 117 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 IGHV1OR15-9A0A0B4J2B8 117 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 FAM223BA6NKX1 122 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 FAM72CH0Y354 149 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 C19orf84I3L1E1 186 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 COX7A2P2O60397 106 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 PPP1R17O96001 155 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 IGLV3-27P01718 113 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 IGHV3-30P01768 117 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 IGHV4-39P01824 125 aa3.83□□□□□ -1.8
UBE4A-203ENST00000545354 PRM2P04554 102 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms