RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 LINC00304Q8N9R0 145 aa2.09□□□□□ -2.07
SNHG1-222ENST00000545308 OR10P1Q8NGE3 313 aa2.09□□□□□ -2.07
SNHG1-222ENST00000545308 OR2D3Q8NGH3 330 aa2.09□□□□□ -2.07
SNHG1-222ENST00000545308 OR4K13Q8NH42 304 aa2.09□□□□□ -2.07
SNHG1-222ENST00000545308 GNPDA2Q8TDQ7 276 aa2.09□□□□□ -2.07
SNHG1-222ENST00000545308 DYNLRB2Q8TF09 96 aa2.09□□□□□ -2.07
SNHG1-222ENST00000545308 BORCS8Q96FH0 119 aa2.09□□□□□ -2.07
SNHG1-222ENST00000545308 HIGD2AQ9BW72 106 aa2.09□□□□□ -2.07
SNHG1-222ENST00000545308 C11orf1Q9H5F2 150 aa2.09□□□□□ -2.07
SNHG1-222ENST00000545308 NUBP2Q9Y5Y2 271 aa2.09□□□□□ -2.07
SNHG1-222ENST00000545308 V9GYQ6 96 aa2.09□□□□□ -2.07
SNHG1-222ENST00000545308 DMBT1Q9UGM3 2413 aaPredicted RBP2.09□□□□□ -2.08
SNHG1-222ENST00000545308 DNAH10Q8IVF4 4471 aa2.09□□□□□ -2.08
SNHG1-222ENST00000545308 TRAV10A0A0B4J240 114 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 A0A1W2PQL4 384 aaPredicted RBP2.08□□□□□ -2.08
SNHG1-222ENST00000545308 ODAMA1E959 279 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 C19orf71A6NCJ1 209 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 CDC42EP2O14613 210 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 DEGS1O15121 323 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 GADD45GO95257 159 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 MT-CO2P00403 227 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 IGKV1-17P01599 117 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 TFF1P04155 84 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 TCRBP04435 133 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 ESDP10768 282 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 LPAR6P43657 344 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 TPPP2P59282 170 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 RAB5BP61020 215 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 PLGLAQ15195 96 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 UNQ5815/PRO19632Q6UWF5 114 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 AMTNQ6UX39 209 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 MSRB3Q8IXL7 192 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 ZNF664Q8N3J9 261 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 DEFB125Q8N687 156 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 Q8N6K4 173 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 OR8J3Q8NGG0 315 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 OTOSQ8NHW6 89 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 PP6455Q8WZ26 134 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 CPNE2Q96FN4 548 aaPredicted RBP2.08□□□□□ -2.08
SNHG1-222ENST00000545308 C20orf27Q9GZN8 174 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 IL20Q9NYY1 176 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 APLNQ9ULZ1 77 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 ARL2BPQ9Y2Y0 163 aa2.08□□□□□ -2.08
SNHG1-222ENST00000545308 MEIKINA0A087WXM9 373 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 PQLC2LA1A4F0 135 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 GRIFINA4D1Z8 144 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 RIIAD1A6NNX1 92 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 BBIP1A8MTZ0 92 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 G3V318 75 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 SLC22A1O15245 554 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 ORC5O43913 435 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 ZNF682O95780 498 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 OR2H2O95918 312 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 IGLV6-57P01721 117 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 SHBGP04278 402 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 HMGN1P05114 100 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 RANP62826 216 aaKnown RBP2.07□□□□□ -2.08
SNHG1-222ENST00000545308 DEFB114Q30KQ6 69 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 TMEM42Q69YG0 159 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 RASL11AQ6T310 242 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 ARPINQ7Z6K5 226 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 UBE2DNLQ8IWF7 75 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 LYPD1Q8N2G4 141 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 STX19Q8N4C7 294 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 OR51T1Q8NGJ9 327 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 OR10D4PQ8NGN7 298 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 RAB2BQ8WUD1 216 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 YIPF3Q9GZM5 350 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 CHST6Q9GZX3 395 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 PBOV1Q9GZY1 135 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 C11orf68Q9H3H3 251 aaKnown RBP2.07□□□□□ -2.08
SNHG1-222ENST00000545308 GPR84Q9NQS5 396 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.07□□□□□ -2.08
SNHG1-222ENST00000545308 MRPL16Q9NX20 251 aaKnown RBP2.07□□□□□ -2.08
SNHG1-222ENST00000545308 ANAPC10Q9UM13 185 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 PXMP4Q9Y6I8 212 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 V9GYS6 101 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 KIAA1109Q2LD37 5005 aa2.07□□□□□ -2.08
SNHG1-222ENST00000545308 PKHD1P08F94 4074 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 A0A1W2PNM2 257 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 SDCBPO00560 298 aaPredicted RBP2.06□□□□□ -2.08
SNHG1-222ENST00000545308 MRPS14O60783 128 aaKnown RBP2.06□□□□□ -2.08
SNHG1-222ENST00000545308 GGCTO75223 188 aaKnown RBP2.06□□□□□ -2.08
SNHG1-222ENST00000545308 NDUFA3O95167 84 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 APOMO95445 188 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 CTXN2P0C2S0 81 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 P0C880 135 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 SPI1P17947 270 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 NPPCP23582 126 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 RPS27P42677 84 aaKnown RBP2.06□□□□□ -2.08
SNHG1-222ENST00000545308 GNG10P50151 68 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 GZMMP51124 257 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 ZNF137PP52743 207 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 TMEM244Q5VVB8 128 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 SLC25A26Q70HW3 274 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 GPHB5Q86YW7 130 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 PACRGLQ8N7B6 248 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 OR13C8Q8NGS7 320 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 ACOT12Q8WYK0 555 aa2.06□□□□□ -2.08
SNHG1-222ENST00000545308 ARL11Q969Q4 196 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms