RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 RABAC1Q9UI14 185 aa3.95□□□□□ -1.78
CPSF7-220ENST00000541963 IGKV3-7A0A075B6H7 116 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 IGHV3OR16-13A0A075B7E8 117 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 IGHV3-74A0A0B4J1X5 117 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 RBMY1BA6NDE4 496 aaKnown RBP3.94□□□□□ -1.78
CPSF7-220ENST00000541963 RBMY1EA6NEQ0 496 aaKnown RBP3.94□□□□□ -1.78
CPSF7-220ENST00000541963 TMEM250H0YL14 139 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 IGKV1-17P01599 117 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 IL4P05112 153 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 RBMY1DP0C7P1 496 aaKnown RBP3.94□□□□□ -1.78
CPSF7-220ENST00000541963 TRGC1P0CF51 173 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 IGLC1P0CG04 106 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 IAPPP10997 89 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 CRYBB3P26998 211 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 TFPI2P48307 235 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 S100A10P60903 97 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 IAH1Q2TAA2 248 aaPredicted RBP3.94□□□□□ -1.78
CPSF7-220ENST00000541963 SPANXN5Q5MJ07 72 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 S100A7AQ86SG5 101 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 ZNF664Q8N3J9 261 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 OR51G1Q8NGK1 321 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 OR4D5Q8NGN0 318 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 KIR2DL5BQ8NHK3 375 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 RAB40CQ96S21 281 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 TXNDC17Q9BRA2 123 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 SCRT1Q9BWW7 348 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 SNHG12Q9BXW3 62 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 MAGT1Q9H0U3 335 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 MS4A6AQ9H2W1 248 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 PSENENQ9NZ42 101 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 MRPL36Q9P0J6 103 aaKnown RBP3.94□□□□□ -1.78
CPSF7-220ENST00000541963 GSKIPQ9P0R6 139 aa3.94□□□□□ -1.78
CPSF7-220ENST00000541963 IGHV3-66A0A0C4DH42 116 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 MAP1LC3B2A6NCE7 125 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 F6UZH7 168 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 K7ERU9 68 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 AGPAT2O15120 278 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 NXPH4O95158 308 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 TRGC2P03986 189 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 SRP19P09132 144 aaKnown RBP3.93□□□□□ -1.78
CPSF7-220ENST00000541963 TAS2R30P59541 319 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 UBE2G2P60604 165 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 SELENOTP62341 195 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 SERF2P84101 59 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 ATP6V1FQ16864 119 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 ZC2HC1BQ5TFG8 222 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 OR8G2PQ6IF36 304 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 CYP2G1PQ6ZSU1 146 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 STXBP6Q8NFX7 210 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 OR10P1Q8NGE3 313 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 MUC7Q8TAX7 377 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 TRGV9Q99603 122 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 PSMG3Q9BT73 122 aaPredicted RBP3.93□□□□□ -1.78
CPSF7-220ENST00000541963 PARD6GQ9BYG4 376 aaPredicted RBP3.93□□□□□ -1.78
CPSF7-220ENST00000541963 MAP1LC3BQ9GZQ8 125 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 WFDC10AQ9H1F0 79 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 NAT8Q9UHE5 227 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 RNF24Q9Y225 148 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 TP53TG1Q9Y2A0 90 aa3.93□□□□□ -1.78
CPSF7-220ENST00000541963 XKRY2A2RUG3 117 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 ZNF705GA8MUZ8 300 aaPredicted RBP3.92□□□□□ -1.78
CPSF7-220ENST00000541963 H7BYZ3 331 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 SSSCA1O60232 199 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 ESDP10768 282 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 ID1P41134 155 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 DEFB131AP59861 70 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 SNRPD3P62318 126 aaKnown RBP3.92□□□□□ -1.78
CPSF7-220ENST00000541963 TMEM41BQ5BJD5 291 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 SAMD13Q5VXD3 122 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 TMEM144Q7Z5S9 345 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 APRG1Q8IVJ8 170 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 ZNF738Q8NE65 137 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 FAM213BQ8TBF2 198 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 FRZBQ92765 325 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 ZNF414Q96IQ9 312 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 VAMP8Q9BV40 100 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 PRO1933Q9H354 126 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 NPVFQ9HCQ7 196 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 MANBALQ9NQG1 85 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 UQCR10Q9UDW1 63 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 NAGKQ9UJ70 344 aa3.92□□□□□ -1.78
CPSF7-220ENST00000541963 HUWE1Q7Z6Z7 4374 aaKnown RBP3.91□□□□□ -1.78
CPSF7-220ENST00000541963 C9JQL5 133 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 FNDC10F2Z333 226 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 H3BP45 60 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 H7C423 109 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 K7EQG2 157 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 IFNA5P01569 189 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 MT-ND6P03923 174 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 BCL2P10415 239 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 SCGB1A1P11684 91 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 G0S2P27469 103 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 AKR1C3P42330 323 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 LYZP61626 148 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 ZNF90Q03938 601 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 RAB31Q13636 194 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 ACTL10Q5JWF8 245 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 FAM162BQ5T6X4 162 aa3.91□□□□□ -1.78
CPSF7-220ENST00000541963 MORN3Q6PF18 240 aaPredicted RBP3.91□□□□□ -1.78
CPSF7-220ENST00000541963 TEX43Q6ZNM6 134 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms