RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 IGKV3D-20A0A0C4DH25 116 aa20.49■□□□□ 0.87
CCM2-218ENST00000541586 Q6AWC8 147 aa20.49■□□□□ 0.87
CCM2-218ENST00000541586 AMTNQ6UX39 209 aa20.49■□□□□ 0.87
CCM2-218ENST00000541586 A8MTW9 85 aa20.48■□□□□ 0.87
CCM2-218ENST00000541586 OR11H12B2RN74 326 aa20.47■□□□□ 0.87
CCM2-218ENST00000541586 M0R2Z0 102 aa20.47■□□□□ 0.87
CCM2-218ENST00000541586 ZFP82Q8N141 532 aa20.47■□□□□ 0.87
CCM2-218ENST00000541586 WFDC10AQ9H1F0 79 aa20.46■□□□□ 0.87
CCM2-218ENST00000541586 TSPOP30536 169 aa20.45■□□□□ 0.86
CCM2-218ENST00000541586 CDKN1BP46527 198 aa20.45■□□□□ 0.86
CCM2-218ENST00000541586 SPINK13Q1W4C9 94 aa20.45■□□□□ 0.86
CCM2-218ENST00000541586 TPPP3Q9BW30 176 aa20.45■□□□□ 0.86
CCM2-218ENST00000541586 GRIFINA4D1Z8 144 aa20.44■□□□□ 0.86
CCM2-218ENST00000541586 RAB5BP61020 215 aa20.44■□□□□ 0.86
CCM2-218ENST00000541586 ATP5L2Q7Z4Y8 100 aa20.44■□□□□ 0.86
CCM2-218ENST00000541586 Q8N1Y9 231 aa20.44■□□□□ 0.86
CCM2-218ENST00000541586 RBMY1BA6NDE4 496 aaKnown RBP20.44■□□□□ 0.86
CCM2-218ENST00000541586 RBMY1EA6NEQ0 496 aaKnown RBP20.44■□□□□ 0.86
CCM2-218ENST00000541586 PHOX2AO14813 284 aa20.44■□□□□ 0.86
CCM2-218ENST00000541586 RBMY1DP0C7P1 496 aaKnown RBP20.44■□□□□ 0.86
CCM2-218ENST00000541586 CMC4P56277 68 aaPredicted RBP20.44■□□□□ 0.86
CCM2-218ENST00000541586 NAGKQ9UJ70 344 aa20.44■□□□□ 0.86
CCM2-218ENST00000541586 TRAV12-2A0A075B6T6 113 aa20.43■□□□□ 0.86
CCM2-218ENST00000541586 C7orf71A4D174 169 aa20.43■□□□□ 0.86
CCM2-218ENST00000541586 DEFA6Q01524 100 aa20.43■□□□□ 0.86
CCM2-218ENST00000541586 GFI1BQ5VTD9 330 aa20.43■□□□□ 0.86
CCM2-218ENST00000541586 DEFB125Q8N687 156 aa20.43■□□□□ 0.86
CCM2-218ENST00000541586 TRAPPC1Q9Y5R8 145 aa20.43■□□□□ 0.86
CCM2-218ENST00000541586 A0A1B0GXF2 115 aa20.42■□□□□ 0.86
CCM2-218ENST00000541586 IGLC6P0CF74 106 aa20.42■□□□□ 0.86
CCM2-218ENST00000541586 FABP9Q0Z7S8 132 aa20.42■□□□□ 0.86
CCM2-218ENST00000541586 RASL11AQ6T310 242 aa20.42■□□□□ 0.86
CCM2-218ENST00000541586 LYZL1Q6UWQ5 148 aa20.42■□□□□ 0.86
CCM2-218ENST00000541586 GNB1LQ9BYB4 327 aa20.42■□□□□ 0.86
CCM2-218ENST00000541586 TRAV12-3A0A0B4J271 114 aa20.41■□□□□ 0.86
CCM2-218ENST00000541586 TMEM136Q6ZRR5 245 aa20.41■□□□□ 0.86
CCM2-218ENST00000541586 FER1L6-AS1Q8NA97 138 aa20.41■□□□□ 0.86
CCM2-218ENST00000541586 FAM110AQ9BQ89 295 aa20.41■□□□□ 0.86
CCM2-218ENST00000541586 C19orf73Q9NVV2 129 aa20.41■□□□□ 0.86
CCM2-218ENST00000541586 SNURFLB1AK76 121 aa20.41■□□□□ 0.86
CCM2-218ENST00000541586 ARMS2P0C7Q2 107 aa20.41■□□□□ 0.86
CCM2-218ENST00000541586 COX19Q49B96 90 aa20.41■□□□□ 0.86
CCM2-218ENST00000541586 DEFB121Q5J5C9 76 aa20.41■□□□□ 0.86
CCM2-218ENST00000541586 WDR73Q6P4I2 378 aa20.41■□□□□ 0.86
CCM2-218ENST00000541586 A0A1B0GUT8 65 aa20.4■□□□□ 0.86
CCM2-218ENST00000541586 ZNF324O75467 553 aaPredicted RBP20.4■□□□□ 0.86
CCM2-218ENST00000541586 FXYD7P58549 80 aa20.4■□□□□ 0.86
CCM2-218ENST00000541586 MUC21Q5SSG8 566 aa20.4■□□□□ 0.86
CCM2-218ENST00000541586 FRZBQ92765 325 aa20.4■□□□□ 0.86
CCM2-218ENST00000541586 K7EIL1 84 aa20.39■□□□□ 0.86
CCM2-218ENST00000541586 CAMPP49913 170 aa20.39■□□□□ 0.86
CCM2-218ENST00000541586 RAB4BP61018 213 aa20.39■□□□□ 0.86
CCM2-218ENST00000541586 HBBP68871 147 aa20.39■□□□□ 0.86
CCM2-218ENST00000541586 ANXA2RQ3ZCQ2 193 aa20.39■□□□□ 0.86
CCM2-218ENST00000541586 CTRLP40313 264 aa20.39■□□□□ 0.85
CCM2-218ENST00000541586 STHQ8IWL8 128 aa20.39■□□□□ 0.85
CCM2-218ENST00000541586 CLUHP3Q96NS8 147 aa20.39■□□□□ 0.85
CCM2-218ENST00000541586 MRPL18Q9H0U6 180 aaKnown RBP20.38■□□□□ 0.85
CCM2-218ENST00000541586 MT-ND6P03923 174 aa20.37■□□□□ 0.85
CCM2-218ENST00000541586 BORCS7Q96B45 105 aa20.37■□□□□ 0.85
CCM2-218ENST00000541586 CRXO43186 299 aaPredicted RBP20.36■□□□□ 0.85
CCM2-218ENST00000541586 RIGQ13278 110 aa20.36■□□□□ 0.85
CCM2-218ENST00000541586 MUC21A0A0G2JKD1 596 aa20.36■□□□□ 0.85
CCM2-218ENST00000541586 MUC21A0A140T8X8 626 aa20.36■□□□□ 0.85
CCM2-218ENST00000541586 TRGC1P0CF51 173 aa20.36■□□□□ 0.85
CCM2-218ENST00000541586 IGHV4-30-4P0DP06 118 aa20.36■□□□□ 0.85
CCM2-218ENST00000541586 TRPT1Q86TN4 253 aaKnown RBP20.36■□□□□ 0.85
CCM2-218ENST00000541586 HIST1H2BKO60814 126 aa20.35■□□□□ 0.85
CCM2-218ENST00000541586 HLA-DQA1P01909 254 aa20.35■□□□□ 0.85
CCM2-218ENST00000541586 HIST1H2BJP06899 126 aa20.35■□□□□ 0.85
CCM2-218ENST00000541586 HIST1H2BOP23527 126 aa20.35■□□□□ 0.85
CCM2-218ENST00000541586 HIST1H2BBP33778 126 aa20.35■□□□□ 0.85
CCM2-218ENST00000541586 HIST1H2BDP58876 126 aa20.35■□□□□ 0.85
CCM2-218ENST00000541586 HIST1H2BCP62807 126 aa20.35■□□□□ 0.85
CCM2-218ENST00000541586 HIST2H2BEQ16778 126 aa20.35■□□□□ 0.85
CCM2-218ENST00000541586 HIST2H2BFQ5QNW6 126 aaPredicted RBP20.35■□□□□ 0.85
CCM2-218ENST00000541586 FAM159AQ6UWV7 190 aa20.35■□□□□ 0.85
CCM2-218ENST00000541586 MRAPQ8TCY5 172 aa20.35■□□□□ 0.85
CCM2-218ENST00000541586 HIST1H2BHQ93079 126 aa20.35■□□□□ 0.85
CCM2-218ENST00000541586 HIST1H2BNQ99877 126 aa20.35■□□□□ 0.85
CCM2-218ENST00000541586 HIST1H2BMQ99879 126 aa20.35■□□□□ 0.85
CCM2-218ENST00000541586 F2Z2F3 143 aa20.33■□□□□ 0.85
CCM2-218ENST00000541586 SSTP61278 116 aa20.33■□□□□ 0.85
CCM2-218ENST00000541586 GNRH2O43555 120 aa20.33■□□□□ 0.84
CCM2-218ENST00000541586 SSBP4Q9BWG4 385 aaPredicted RBP20.33■□□□□ 0.84
CCM2-218ENST00000541586 A0A1B0GW15 77 aa20.32■□□□□ 0.84
CCM2-218ENST00000541586 KCNS1Q96KK3 526 aa20.32■□□□□ 0.84
CCM2-218ENST00000541586 CNFNQ9BYD5 112 aa20.32■□□□□ 0.84
CCM2-218ENST00000541586 H3BVH4 76 aa20.31■□□□□ 0.84
CCM2-218ENST00000541586 RBMY1A1P0DJD3 496 aaKnown RBP20.31■□□□□ 0.84
CCM2-218ENST00000541586 RBMY1CP0DJD4 496 aa20.31■□□□□ 0.84
CCM2-218ENST00000541586 ASIPP42127 132 aa20.31■□□□□ 0.84
CCM2-218ENST00000541586 RBMY1FQ15415 496 aaKnown RBP20.31■□□□□ 0.84
CCM2-218ENST00000541586 TDRG1Q3Y452 100 aa20.31■□□□□ 0.84
CCM2-218ENST00000541586 SNAI2O43623 268 aa20.3■□□□□ 0.84
CCM2-218ENST00000541586 OR5AL1P0C617 328 aa20.3■□□□□ 0.84
CCM2-218ENST00000541586 SLAQ13239 276 aa20.3■□□□□ 0.84
CCM2-218ENST00000541586 APCSP02743 223 aa20.3■□□□□ 0.84
CCM2-218ENST00000541586 NTF3P20783 257 aa20.3■□□□□ 0.84
CCM2-218ENST00000541586 S100A4P26447 101 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms