RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 IGKV1D-39P04432 117 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 ZCCHC24Q8N2G6 241 aaKnown RBP4.81□□□□□ -1.64
PTPRD-214ENST00000540109 C3orf22Q8N5N4 141 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 PEMTQ9UBM1 199 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 LOXL1Q08397 574 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-214ENST00000540109 PHLDA1Q8WV24 401 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-214ENST00000540109 BAALCQ8WXS3 180 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 MYO7BQ6PIF6 2116 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 DOCK7Q96N67 2140 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 MKI67P46013 3256 aaKnown RBP4.81□□□□□ -1.64
PTPRD-214ENST00000540109 IGHV3OR16-8A0A075B7F1 116 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 IGHV3-66A0A0C4DH42 116 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 C17orf100A8MU93 164 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 IGHV1-46P01743 117 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 SNRPD3P62318 126 aaKnown RBP4.81□□□□□ -1.64
PTPRD-214ENST00000540109 LINC00311Q8N616 119 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 DCTN5Q9BTE1 182 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 C21orf62Q9NYP8 219 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 TRAV12-2A0A075B6T6 113 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 CGB3P0DN86 165 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 CGB7P0DN87 165 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 LY6DQ14210 128 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 LINC01620Q4KN68 170 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 KAAG1Q9UBP8 84 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 METRNQ9UJH8 293 aa4.81□□□□□ -1.64
PTPRD-214ENST00000540109 UBE2L6O14933 153 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 TOMM7Q9P0U1 55 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 C5orf42Q9H799 3197 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 RBAKDNA6NC62 111 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 NDUFA7O95182 113 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 MED14OSP0DP75 135 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 PRR20EP86478 221 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 PRR20CP86479 221 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 PRR20DP86480 221 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 PRR20BP86481 221 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 PRR20AP86496 221 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 MED12LQ86YW9 2145 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 BCE1O60756 84 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 P0DMU3 169 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 FAM231AP0DMU4 169 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 FAM231CP0DMU5 169 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 DAD1P61803 113 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 RNF114Q9Y508 228 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 OTOGLQ3ZCN5 2332 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 CRLF1O75462 422 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 IGHV3-23P01764 117 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 TRPT1Q86TN4 253 aaKnown RBP4.8□□□□□ -1.64
PTPRD-214ENST00000540109 GAFA1Q96PS6 74 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 TIMM21Q9BVV7 248 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 NCOR1O75376 2440 aa4.8□□□□□ -1.64
PTPRD-214ENST00000540109 MED13Q9UHV7 2174 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 REV3LO60673 3130 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 A0A0G2JNJ9 132 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 LINC00205P59089 165 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 DDB2Q92466 427 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 CCL17Q92583 94 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 Q9UFV3 132 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 TNRC18O15417 2968 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-214ENST00000540109 J3QLI3 93 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 ERCC8Q13216 396 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 SP5Q6BEB4 398 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-214ENST00000540109 THAP8Q8NA92 274 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 ZNF407Q9C0G0 2248 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 GPR179Q6PRD1 2367 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 TRAV3A0A0B4J244 114 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 NDPQ00604 133 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 RNASE6Q93091 150 aaKnown RBP4.79□□□□□ -1.64
PTPRD-214ENST00000540109 SHANK2-AS3Q9BTD1 123 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 IGHV3-49A0A0A0MS15 119 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 WISP2O76076 250 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 MYOD1P15172 320 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 DAND5Q8N907 189 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 SMIM2Q9BVW6 85 aa4.79□□□□□ -1.64
PTPRD-214ENST00000540109 IGKV2-40A0A087WW87 121 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-214ENST00000540109 TRAV4A0A0B4J268 109 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 IGKV2D-40P01614 121 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-214ENST00000540109 IGLC6P0CF74 106 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 DNAJC13O75165 2243 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 C2orf70A6NJV1 201 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 SH2D1AO60880 128 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 RANBP2P49792 3224 aaKnown RBP4.78□□□□□ -1.64
PTPRD-214ENST00000540109 SMIM26A0A096LP01 95 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 MRPL51Q4U2R6 128 aaKnown RBP4.78□□□□□ -1.64
PTPRD-214ENST00000540109 ODF3L1Q8IXM7 274 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 CCL13Q99616 98 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 TP53TG3Q9ULZ0 132 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 SDHAF1A6NFY7 115 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 EFNA4P52798 201 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 MLANAQ16655 118 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 ECSCRQ19T08 205 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 C11orf44Q8N8P7 122 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 MLST8Q9BVC4 326 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 MALP21145 153 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 HAMPP81172 84 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 FAM27E3Q08E93 113 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 C17orf58Q2M2W7 97 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 ZNF833PQ6ZTB9 187 aa4.78□□□□□ -1.64
PTPRD-214ENST00000540109 KLK5Q9Y337 293 aaPredicted RBP4.78□□□□□ -1.64
PTPRD-214ENST00000540109 FREM1Q5H8C1 2179 aa4.78□□□□□ -1.65
PTPRD-214ENST00000540109 CD28P10747 220 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 516.5 ms