RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 KAAG1Q9UBP8 84 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 SLC25A15Q9Y619 301 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 SDK1Q7Z5N4 2213 aa5.15□□□□□ -1.59
USP28-207ENST00000538475 PLCE1Q9P212 2302 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 C11orf86A6NJI1 115 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 M0R2P5 195 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 LGALS9O00182 355 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 DUSP14O95147 198 aaKnown RBP5.14□□□□□ -1.59
USP28-207ENST00000538475 NDUFA3O95167 84 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 IGHV3-30P01768 117 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 ORM1P02763 201 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 CFIP05156 583 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 IGHV3-30-5P0DP03 117 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 MFAP4P55083 255 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 FHL2Q14192 279 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 DIAPH2-AS1Q14236 149 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 MEIG1Q5JSS6 88 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 C10orf55Q5SWW7 151 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 UTF1Q5T230 341 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 HCP5Q6MZN7 132 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 ZFP2Q6ZN57 461 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 SPRR3Q9UBC9 169 aa5.14□□□□□ -1.59
USP28-207ENST00000538475 ARHGAP32A7KAX9 2087 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 TRAV2A0A0B4J234 112 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 TRAV4A0A0B4J268 109 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 SDHAF1A6NFY7 115 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 H3BMM0 161 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 H3BTX0 84 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 CCDC179H3BU77 68 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 K7EIM0 57 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 NDUFB3O43676 98 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 CNIH1O95406 144 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 IGHV3-33P01772 117 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 COX6CP09669 75 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 ZNF883P0CG24 379 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 CFC1BP0CG36 223 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 CFC1P0CG37 223 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 DLX6P56179 175 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 FXYD7P58549 80 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 LINC01620Q4KN68 170 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 ZNF575Q86XF7 245 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 C15orf53Q8NAA6 179 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 NUP37Q8NFH4 326 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 UBE2WQ96B02 151 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 TMEM101Q96IK0 257 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 TIMM17AQ99595 171 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 CCL13Q99616 98 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 VPREB3Q9UKI3 123 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 CADP27708 2225 aa5.13□□□□□ -1.59
USP28-207ENST00000538475 PRRC2AP48634 2157 aaKnown RBP5.12□□□□□ -1.59
USP28-207ENST00000538475 CHD7Q9P2D1 2997 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 TMSB15BA0A087X1C1 80 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 C9JAW5 83 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 M0R3E3 92 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 TIMM23O14925 209 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 UQCRQO14949 82 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 IGHV1-46P01743 117 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 IGHV3-48P01763 117 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 CXCL5P42830 114 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 SUMO2P61956 95 aaKnown RBP5.12□□□□□ -1.59
USP28-207ENST00000538475 PMVKQ15126 192 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 KLK9Q2XQG4 91 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 TMEM155Q4W5P6 130 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 PMS2CLQ68D20 193 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 IGFL4Q6B9Z1 124 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 FAM159AQ6UWV7 190 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 POM121L12Q8N7R1 296 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 FAM57AQ8TBR7 257 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 BAALCQ8WXS3 180 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 C17orf77Q96MU5 243 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 ODF3Q96PU9 254 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 HES7Q9BYE0 225 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 DEFB127Q9H1M4 99 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 KLK9Q9UKQ9 250 aa5.12□□□□□ -1.59
USP28-207ENST00000538475 URB1O60287 2271 aaKnown RBP5.12□□□□□ -1.59
USP28-207ENST00000538475 CUL9Q8IWT3 2517 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 IGHV4OR15-8A0A075B7B6 117 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 A0A087WW49 117 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 H3BVH4 76 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 J3KT08 172 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 SPRY3O43610 288 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 ENSAO43768 121 aaKnown RBP5.11□□□□□ -1.59
USP28-207ENST00000538475 IGHV1-8P0DP01 117 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 ZNF80P51504 273 aaPredicted RBP5.11□□□□□ -1.59
USP28-207ENST00000538475 HES3Q5TGS1 186 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 C2orf66Q6UXQ4 117 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 C9orf47Q6ZRZ4 202 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 FAM216BQ8N7L0 139 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 TMEM263Q8WUH6 116 aaKnown RBP5.11□□□□□ -1.59
USP28-207ENST00000538475 PLEKHB2Q96CS7 222 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 VKORC1Q9BQB6 163 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 DPH3P1Q9H4G8 78 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 MSRB1Q9NZV6 116 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 ICE1Q9Y2F5 2266 aa5.11□□□□□ -1.59
USP28-207ENST00000538475 CHD9Q3L8U1 2897 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 IGHV1-3A0A0C4DH29 117 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 LEPROTO15243 131 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 CRLF1O75462 422 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 IGLV1-47P01700 117 aa5.1□□□□□ -1.59
USP28-207ENST00000538475 GYPEP15421 78 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms