RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	TRAV25	A0A0B4J276	109 aa		12.32	□□□□□ -0.44
NCAPD3-213	ENST00000534532	INSL3	P51460	131 aa		12.32	□□□□□ -0.44
NCAPD3-213	ENST00000534532	NDUFAF3	Q9BU61	184 aa		12.32	□□□□□ -0.44
NCAPD3-213	ENST00000534532		Q9HAA7	133 aa		12.32	□□□□□ -0.44
NCAPD3-213	ENST00000534532	AGPAT4-IT1	Q9H0P7	198 aa		12.32	□□□□□ -0.44
NCAPD3-213	ENST00000534532	NXPH4	O95158	308 aa		12.32	□□□□□ -0.44
NCAPD3-213	ENST00000534532	MRPL51	Q4U2R6	128 aa	Known RBP	12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	PRSS57	Q6UWY2	283 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	IGFBPL1	Q8WX77	278 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	MED13	Q9UHV7	2174 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	SON	P18583	2426 aa	Known RBP	12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	IGHV4OR15-8	A0A075B7B6	117 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532		A0A087WW49	117 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	RPL32	P62910	135 aa	Known RBP	12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	UBE2B	P63146	152 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	IL17D	Q8TAD2	202 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	IGLV11-55	A0A075B6I3	123 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	hDV102S1	A0JD36	115 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532		H3BMM0	161 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	HERVK_113	P63121	156 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	PRR20E	P86478	221 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	PRR20C	P86479	221 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	PRR20D	P86480	221 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	PRR20B	P86481	221 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	PRR20A	P86496	221 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	UBE2W	Q96B02	151 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532	ZC2HC1A	Q96GY0	325 aa		12.31	□□□□□ -0.44
NCAPD3-213	ENST00000534532		A0A1B0GV72	72 aa		12.3	□□□□□ -0.44
NCAPD3-213	ENST00000534532	CYYR1	Q96J86	154 aa		12.3	□□□□□ -0.44
NCAPD3-213	ENST00000534532	ZNF48	Q96MX3	618 aa	Predicted RBP	12.3	□□□□□ -0.44
NCAPD3-213	ENST00000534532	TRAV26-2	A0A0B4J265	109 aa		12.3	□□□□□ -0.44
NCAPD3-213	ENST00000534532	DYNAP	Q8N1N2	210 aa		12.3	□□□□□ -0.44
NCAPD3-213	ENST00000534532	SMIM2	Q9BVW6	85 aa		12.3	□□□□□ -0.44
NCAPD3-213	ENST00000534532	CSPG4	Q6UVK1	2322 aa		12.29	□□□□□ -0.44
NCAPD3-213	ENST00000534532	UBE2C	O00762	179 aa		12.29	□□□□□ -0.44
NCAPD3-213	ENST00000534532	C20orf78	Q9BR46	151 aa		12.29	□□□□□ -0.44
NCAPD3-213	ENST00000534532	CLPSL2	Q6UWE3	100 aa		12.29	□□□□□ -0.44
NCAPD3-213	ENST00000534532		A8MWP6	167 aa		12.29	□□□□□ -0.44
NCAPD3-213	ENST00000534532	HLA-DMB	P28068	263 aa		12.29	□□□□□ -0.44
NCAPD3-213	ENST00000534532	C4orf3	Q8WVX3	66 aa		12.29	□□□□□ -0.44
NCAPD3-213	ENST00000534532	FGF23	Q9GZV9	251 aa	Predicted RBP	12.29	□□□□□ -0.44
NCAPD3-213	ENST00000534532	ANKHD1	Q8IWZ3	2542 aa	Known RBP	12.29	□□□□□ -0.44
NCAPD3-213	ENST00000534532	IGHG2	P01859	326 aa		12.28	□□□□□ -0.44
NCAPD3-213	ENST00000534532	C2orf82	Q6UX34	121 aa		12.28	□□□□□ -0.44
NCAPD3-213	ENST00000534532	SIRPD	Q9H106	197 aa		12.28	□□□□□ -0.44
NCAPD3-213	ENST00000534532	C2orf70	A6NJV1	201 aa		12.28	□□□□□ -0.44
NCAPD3-213	ENST00000534532		K7EMT4	169 aa		12.28	□□□□□ -0.44
NCAPD3-213	ENST00000534532	DNAJC9-AS1	A6NH13	148 aa		12.28	□□□□□ -0.44
NCAPD3-213	ENST00000534532	GNRH2	O43555	120 aa		12.28	□□□□□ -0.44
NCAPD3-213	ENST00000534532	CITED2	Q99967	270 aa	Predicted RBP	12.28	□□□□□ -0.44
NCAPD3-213	ENST00000534532		I3L2K1	104 aa		12.28	□□□□□ -0.44
NCAPD3-213	ENST00000534532	ZNF843	Q8N446	348 aa		12.28	□□□□□ -0.44
NCAPD3-213	ENST00000534532		Q8N7P7	452 aa		12.28	□□□□□ -0.44
NCAPD3-213	ENST00000534532		K7EIM0	57 aa		12.27	□□□□□ -0.44
NCAPD3-213	ENST00000534532	C17orf77	Q96MU5	243 aa		12.27	□□□□□ -0.44
NCAPD3-213	ENST00000534532	CTSG	P08311	255 aa		12.27	□□□□□ -0.45
NCAPD3-213	ENST00000534532	GYPE	P15421	78 aa		12.27	□□□□□ -0.45
NCAPD3-213	ENST00000534532		Q6ZQT7	251 aa		12.27	□□□□□ -0.45
NCAPD3-213	ENST00000534532	TRAV8-3	A0A0A6YYJ7	113 aa		12.27	□□□□□ -0.45
NCAPD3-213	ENST00000534532		Q0VG73	95 aa		12.27	□□□□□ -0.45
NCAPD3-213	ENST00000534532	GPHB5	Q86YW7	130 aa		12.27	□□□□□ -0.45
NCAPD3-213	ENST00000534532	ATP6V0E2	Q8NHE4	81 aa		12.26	□□□□□ -0.45
NCAPD3-213	ENST00000534532	ZNF726P1	Q15940	193 aa		12.26	□□□□□ -0.45
NCAPD3-213	ENST00000534532	C16orf54	Q6UWD8	224 aa		12.26	□□□□□ -0.45
NCAPD3-213	ENST00000534532	TNFRSF13B	O14836	293 aa	Predicted RBP	12.26	□□□□□ -0.45
NCAPD3-213	ENST00000534532	IGLV1-47	P01700	117 aa		12.26	□□□□□ -0.45
NCAPD3-213	ENST00000534532	NDUFA12	Q9UI09	145 aa		12.26	□□□□□ -0.45
NCAPD3-213	ENST00000534532	C19orf84	I3L1E1	186 aa		12.26	□□□□□ -0.45
NCAPD3-213	ENST00000534532		Q6ZSR3	168 aa		12.26	□□□□□ -0.45
NCAPD3-213	ENST00000534532		F8W735	103 aa	Predicted RBP	12.25	□□□□□ -0.45
NCAPD3-213	ENST00000534532	XCL1	P47992	114 aa		12.25	□□□□□ -0.45
NCAPD3-213	ENST00000534532	C11orf52	Q96A22	123 aa		12.25	□□□□□ -0.45
NCAPD3-213	ENST00000534532	C18orf32	Q8TCD1	76 aa		12.25	□□□□□ -0.45
NCAPD3-213	ENST00000534532	SIGLEC8	Q9NYZ4	499 aa		12.25	□□□□□ -0.45
NCAPD3-213	ENST00000534532	MEGF9	Q9H1U4	602 aa		12.25	□□□□□ -0.45
NCAPD3-213	ENST00000534532	PLCE1	Q9P212	2302 aa		12.25	□□□□□ -0.45
NCAPD3-213	ENST00000534532	CD5L	O43866	347 aa		12.24	□□□□□ -0.45
NCAPD3-213	ENST00000534532	LTA	P01374	205 aa		12.24	□□□□□ -0.45
NCAPD3-213	ENST00000534532	TAL2	Q16559	108 aa		12.24	□□□□□ -0.45
NCAPD3-213	ENST00000534532		A6NDX4	124 aa		12.24	□□□□□ -0.45
NCAPD3-213	ENST00000534532		V9GYV3	84 aa		12.24	□□□□□ -0.45
NCAPD3-213	ENST00000534532	WISP2	O76076	250 aa		12.24	□□□□□ -0.45
NCAPD3-213	ENST00000534532	RITA1	Q96K30	269 aa		12.24	□□□□□ -0.45
NCAPD3-213	ENST00000534532	ADAMTSL5	Q6ZMM2	481 aa		12.23	□□□□□ -0.45
NCAPD3-213	ENST00000534532	WFDC11	Q8NEX6	87 aa		12.23	□□□□□ -0.45
NCAPD3-213	ENST00000534532	HIST1H4A	P62805	103 aa	Known RBP	12.23	□□□□□ -0.45
NCAPD3-213	ENST00000534532	SMIM27	A0A1W2PRY6	76 aa		12.23	□□□□□ -0.45
NCAPD3-213	ENST00000534532	IGKV1-17	P01599	117 aa		12.23	□□□□□ -0.45
NCAPD3-213	ENST00000534532	EDA2R	Q9HAV5	297 aa		12.23	□□□□□ -0.45
NCAPD3-213	ENST00000534532		A0A087X0K7	114 aa		12.23	□□□□□ -0.45
NCAPD3-213	ENST00000534532	DEFB135	Q30KP9	77 aa		12.23	□□□□□ -0.45
NCAPD3-213	ENST00000534532	SCRT2	Q9NQ03	307 aa		12.23	□□□□□ -0.45
NCAPD3-213	ENST00000534532	BUB3	O43684	328 aa		12.22	□□□□□ -0.45
NCAPD3-213	ENST00000534532	STPG4	Q8N801	248 aa		12.22	□□□□□ -0.45
NCAPD3-213	ENST00000534532	TM2D2	Q9BX73	214 aa		12.22	□□□□□ -0.45
NCAPD3-213	ENST00000534532	LMO4	P61968	165 aa		12.22	□□□□□ -0.45
NCAPD3-213	ENST00000534532	NDUFA11	Q86Y39	141 aa		12.22	□□□□□ -0.45
NCAPD3-213	ENST00000534532	CFHR4	Q92496	578 aa		12.22	□□□□□ -0.45
NCAPD3-213	ENST00000534532	NPY	P01303	97 aa		12.22	□□□□□ -0.45
NCAPD3-213	ENST00000534532		K7EQD1	137 aa		12.21	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms