RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 GUK1Q16774 197 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 PAPPA-AS1Q5QFB9 102 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 TMEM14EPQ6UXP3 125 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 SH2D6Q7Z4S9 175 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 C15orf40Q8WUR7 153 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 AP3S1Q92572 193 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 DNAJC30Q96LL9 226 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 SOSTQ9BQB4 213 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 SRRQ9GZT4 340 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 CCDC59Q9P031 241 aaKnown RBP5.19□□□□□ -1.58
USP48-212ENST00000527823 RPH3ALQ9UNE2 315 aa5.19□□□□□ -1.58
USP48-212ENST00000527823 TRAV8-3A0A0A6YYJ7 113 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 PAGE4O60829 102 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 HOXB5P09067 269 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 ARL16Q0P5N6 197 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 TMEM183BQ1AE95 376 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 C10orf113Q5VZT2 155 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 Q6ZRU5 148 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 DAZ4Q86SG3 579 aaKnown RBP5.18□□□□□ -1.58
USP48-212ENST00000527823 TMEM183AQ8IXX5 376 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 EXOC3-AS1Q8N2X6 119 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 RAB2BQ8WUD1 216 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 LINC00477Q96M19 166 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 Q9H521 79 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 NPVFQ9HCQ7 196 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 DAZ3Q9NR90 486 aaKnown RBP5.18□□□□□ -1.58
USP48-212ENST00000527823 MCUBQ9NWR8 336 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 PSENENQ9NZ42 101 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 SCP2D1Q9UJQ7 156 aa5.18□□□□□ -1.58
USP48-212ENST00000527823 PIGBOS1A0A0B4J2F0 54 aa5.17□□□□□ -1.58
USP48-212ENST00000527823 RNF222A6NCQ9 220 aa5.17□□□□□ -1.58
USP48-212ENST00000527823 PANO1I0J062 215 aa5.17□□□□□ -1.58
USP48-212ENST00000527823 GOSR2O14653 212 aa5.17□□□□□ -1.58
USP48-212ENST00000527823 PYYP10082 97 aa5.17□□□□□ -1.58
USP48-212ENST00000527823 PPP1R1AQ13522 171 aa5.17□□□□□ -1.58
USP48-212ENST00000527823 TMEM128Q5BJH2 165 aa5.17□□□□□ -1.58
USP48-212ENST00000527823 TMEM78Q5T7P6 136 aa5.17□□□□□ -1.58
USP48-212ENST00000527823 SLC25A29Q8N8R3 303 aa5.17□□□□□ -1.58
USP48-212ENST00000527823 OR4C5Q8NGB2 326 aa5.17□□□□□ -1.58
USP48-212ENST00000527823 ATP6V0E2Q8NHE4 81 aa5.17□□□□□ -1.58
USP48-212ENST00000527823 SCGB3A2Q96PL1 93 aa5.17□□□□□ -1.58
USP48-212ENST00000527823 NAA50Q9GZZ1 169 aaKnown RBP5.17□□□□□ -1.58
USP48-212ENST00000527823 ZNF492Q9P255 531 aa5.17□□□□□ -1.58
USP48-212ENST00000527823 CTDSPLO15194 276 aa5.16□□□□□ -1.58
USP48-212ENST00000527823 LINC00694P0DN24 101 aa5.16□□□□□ -1.58
USP48-212ENST00000527823 UBE2MP61081 183 aaKnown RBP5.16□□□□□ -1.58
USP48-212ENST00000527823 PDE6HQ13956 83 aa5.16□□□□□ -1.58
USP48-212ENST00000527823 RHOHQ15669 191 aa5.16□□□□□ -1.58
USP48-212ENST00000527823 LCE1AQ5T7P2 110 aa5.16□□□□□ -1.58
USP48-212ENST00000527823 MIC13Q5XKP0 118 aa5.16□□□□□ -1.58
USP48-212ENST00000527823 Q8N976 141 aa5.16□□□□□ -1.58
USP48-212ENST00000527823 SPXQ9BT56 116 aa5.16□□□□□ -1.58
USP48-212ENST00000527823 PAXXQ9BUH6 204 aa5.16□□□□□ -1.58
USP48-212ENST00000527823 PRELID1Q9Y255 219 aa5.16□□□□□ -1.58
USP48-212ENST00000527823 FABP12A6NFH5 140 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 PGPEP1LA6NFU8 196 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 FBLL1A6NHQ2 334 aaKnown RBP5.15□□□□□ -1.59
USP48-212ENST00000527823 M0R2P5 195 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 CTDSP2O14595 271 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 VCYO14598 125 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 SFT2D2O95562 160 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 PFN1P07737 140 aaKnown RBP5.15□□□□□ -1.59
USP48-212ENST00000527823 HIST1H1EP10412 219 aaKnown RBP5.15□□□□□ -1.59
USP48-212ENST00000527823 ZNF138P52744 262 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 IL18Q14116 193 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 ZNF266Q14584 549 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 CTF1Q16619 201 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 Q6AWC8 147 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 FAM122CQ6P4D5 195 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 WDR73Q6P4I2 378 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 PQLC2Q6ZP29 291 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 SMIM8Q96KF7 97 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 GTSF1LQ9H1H1 148 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 VCX3AQ9NNX9 186 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 TMEM14CQ9P0S9 112 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 NAGKQ9UJ70 344 aa5.15□□□□□ -1.59
USP48-212ENST00000527823 IGKV2D-24A0A075B6R9 120 aa5.14□□□□□ -1.59
USP48-212ENST00000527823 TRBV7-9A0A0J9YWB2 115 aa5.14□□□□□ -1.59
USP48-212ENST00000527823 C5orf51A6NDU8 294 aa5.14□□□□□ -1.59
USP48-212ENST00000527823 RGS5O15539 181 aa5.14□□□□□ -1.59
USP48-212ENST00000527823 TSC22D2O75157 780 aa5.14□□□□□ -1.59
USP48-212ENST00000527823 CAMLGP49069 296 aa5.14□□□□□ -1.59
USP48-212ENST00000527823 CAV2P51636 162 aa5.14□□□□□ -1.59
USP48-212ENST00000527823 DPPA3Q6W0C5 159 aa5.14□□□□□ -1.59
USP48-212ENST00000527823 NRARPQ7Z6K4 114 aa5.14□□□□□ -1.59
USP48-212ENST00000527823 IGLV5-37A0A075B6J1 123 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 A0A087WXM4 84 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 IGHV3-73A0A0B4J1V6 119 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 TRBV6-4A0A1B0GX49 114 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 GGTLC3B5MD39 225 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 TYMSP04818 313 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 CFAP126Q5VTH2 177 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 ATRAIDQ6UW56 229 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 FAM159AQ6UWV7 190 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 OR1L4Q8NGR5 311 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 RMI2Q96E14 147 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 PHYHIPLQ96FC7 376 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 PFDN5Q99471 154 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 PRADC1Q9BSG0 188 aa5.13□□□□□ -1.59
USP48-212ENST00000527823 GGACTQ9BVM4 153 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms