RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 RBAKDNA6NC62 111 aa10.47□□□□□ -0.73
CHMP4A-203ENST00000527154 CCSO14618 274 aa10.47□□□□□ -0.73
CHMP4A-203ENST00000527154 CST7O76096 145 aa10.47□□□□□ -0.73
CHMP4A-203ENST00000527154 BTCP35070 178 aa10.47□□□□□ -0.73
CHMP4A-203ENST00000527154 VWC2Q2TAL6 325 aa10.47□□□□□ -0.73
CHMP4A-203ENST00000527154 ATRAIDQ6UW56 229 aa10.47□□□□□ -0.73
CHMP4A-203ENST00000527154 PRADC1Q9BSG0 188 aa10.47□□□□□ -0.73
CHMP4A-203ENST00000527154 CCDC32Q9BV29 185 aa10.47□□□□□ -0.73
CHMP4A-203ENST00000527154 AAMDCQ9H7C9 122 aa10.47□□□□□ -0.73
CHMP4A-203ENST00000527154 SLC39A9Q9NUM3 307 aa10.47□□□□□ -0.73
CHMP4A-203ENST00000527154 UQCC1Q9NVA1 299 aa10.47□□□□□ -0.73
CHMP4A-203ENST00000527154 TIMM9Q9Y5J7 89 aa10.47□□□□□ -0.73
CHMP4A-203ENST00000527154 FBLL1A6NHQ2 334 aaKnown RBP10.46□□□□□ -0.73
CHMP4A-203ENST00000527154 FAM25EA8MYX2 175 aa10.46□□□□□ -0.73
CHMP4A-203ENST00000527154 FAM159AQ6UWV7 190 aa10.46□□□□□ -0.73
CHMP4A-203ENST00000527154 FAM167A-AS1Q96KT0 104 aa10.46□□□□□ -0.73
CHMP4A-203ENST00000527154 UBE2L5PA0A1B0GUS4 154 aa10.45□□□□□ -0.74
CHMP4A-203ENST00000527154 FAM24AA6NFZ4 105 aa10.45□□□□□ -0.74
CHMP4A-203ENST00000527154 IL7P13232 177 aa10.45□□□□□ -0.74
CHMP4A-203ENST00000527154 BAXQ07812 192 aa10.45□□□□□ -0.74
CHMP4A-203ENST00000527154 FAM122CQ6P4D5 195 aa10.45□□□□□ -0.74
CHMP4A-203ENST00000527154 SDHCQ99643 169 aaPredicted RBP10.45□□□□□ -0.74
CHMP4A-203ENST00000527154 C20orf85Q9H1P6 137 aa10.45□□□□□ -0.74
CHMP4A-203ENST00000527154 GGTLC3B5MD39 225 aa10.44□□□□□ -0.74
CHMP4A-203ENST00000527154 CFAP126Q5VTH2 177 aa10.44□□□□□ -0.74
CHMP4A-203ENST00000527154 RMI2Q96E14 147 aa10.44□□□□□ -0.74
CHMP4A-203ENST00000527154 SLC25A2Q9BXI2 301 aa10.44□□□□□ -0.74
CHMP4A-203ENST00000527154 TRAV8-1A0A0A6YYK1 113 aa10.43□□□□□ -0.74
CHMP4A-203ENST00000527154 C5orf51A6NDU8 294 aa10.43□□□□□ -0.74
CHMP4A-203ENST00000527154 GNRH2O43555 120 aa10.43□□□□□ -0.74
CHMP4A-203ENST00000527154 PVALBP20472 110 aaPredicted RBP10.43□□□□□ -0.74
CHMP4A-203ENST00000527154 DPPA3Q6W0C5 159 aa10.43□□□□□ -0.74
CHMP4A-203ENST00000527154 DNAJC30Q96LL9 226 aa10.43□□□□□ -0.74
CHMP4A-203ENST00000527154 SH3BGRL3Q9H299 93 aa10.43□□□□□ -0.74
CHMP4A-203ENST00000527154 C11orf1Q9H5F2 150 aa10.43□□□□□ -0.74
CHMP4A-203ENST00000527154 NBEAP1P0C6P0 100 aa10.42□□□□□ -0.74
CHMP4A-203ENST00000527154 S100A11P31949 105 aa10.42□□□□□ -0.74
CHMP4A-203ENST00000527154 SULT1A1P50225 295 aa10.42□□□□□ -0.74
CHMP4A-203ENST00000527154 TMED6Q8WW62 240 aa10.42□□□□□ -0.74
CHMP4A-203ENST00000527154 KRTAP9-2Q9BYQ4 174 aa10.42□□□□□ -0.74
CHMP4A-203ENST00000527154 RPH3ALQ9UNE2 315 aa10.42□□□□□ -0.74
CHMP4A-203ENST00000527154 TYMSP04818 313 aa10.41□□□□□ -0.74
CHMP4A-203ENST00000527154 FGF7P21781 194 aa10.41□□□□□ -0.74
CHMP4A-203ENST00000527154 S100A10P60903 97 aa10.41□□□□□ -0.74
CHMP4A-203ENST00000527154 HBG1P69891 147 aa10.41□□□□□ -0.74
CHMP4A-203ENST00000527154 HBG2P69892 147 aa10.41□□□□□ -0.74
CHMP4A-203ENST00000527154 STX12Q86Y82 276 aa10.41□□□□□ -0.74
CHMP4A-203ENST00000527154 FXYD5Q96DB9 178 aa10.41□□□□□ -0.74
CHMP4A-203ENST00000527154 LYRM2Q9NU23 88 aaPredicted RBP10.41□□□□□ -0.74
CHMP4A-203ENST00000527154 IGSF23A1L1A6 192 aa10.4□□□□□ -0.74
CHMP4A-203ENST00000527154 MGST1P10620 155 aaKnown RBP10.4□□□□□ -0.74
CHMP4A-203ENST00000527154 CIRBPQ14011 172 aaKnown RBP10.4□□□□□ -0.74
CHMP4A-203ENST00000527154 TMEM252Q8N6L7 170 aa10.4□□□□□ -0.74
CHMP4A-203ENST00000527154 PTH2Q96A98 100 aa10.4□□□□□ -0.74
CHMP4A-203ENST00000527154 PHYHIPLQ96FC7 376 aa10.4□□□□□ -0.74
CHMP4A-203ENST00000527154 C2orf50Q96LR7 162 aa10.4□□□□□ -0.74
CHMP4A-203ENST00000527154 GPN1Q9HCN4 374 aaPredicted RBP10.4□□□□□ -0.74
CHMP4A-203ENST00000527154 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.4□□□□□ -0.74
CHMP4A-203ENST00000527154 IGKV2D-24A0A075B6R9 120 aa10.39□□□□□ -0.75
CHMP4A-203ENST00000527154 TRAV6A0A075B6T7 132 aa10.39□□□□□ -0.75
CHMP4A-203ENST00000527154 PANO1I0J062 215 aa10.39□□□□□ -0.75
CHMP4A-203ENST00000527154 LYRM1O43325 122 aa10.39□□□□□ -0.75
CHMP4A-203ENST00000527154 GAS8-AS1O95177 125 aa10.39□□□□□ -0.75
CHMP4A-203ENST00000527154 OR10J4P0C629 311 aa10.39□□□□□ -0.75
CHMP4A-203ENST00000527154 C14orf177Q52M58 125 aa10.39□□□□□ -0.75
CHMP4A-203ENST00000527154 GCSAMLQ5JQS6 135 aa10.39□□□□□ -0.75
CHMP4A-203ENST00000527154 NIT1Q86X76 327 aa10.39□□□□□ -0.75
CHMP4A-203ENST00000527154 SEC22CQ9BRL7 303 aa10.39□□□□□ -0.75
CHMP4A-203ENST00000527154 LPAP08519 4548 aa10.38□□□□□ -0.75
CHMP4A-203ENST00000527154 A0A087WWC5 75 aa10.38□□□□□ -0.75
CHMP4A-203ENST00000527154 SEC11BP0C7V7 166 aa10.38□□□□□ -0.75
CHMP4A-203ENST00000527154 ATP6V1FQ16864 119 aa10.38□□□□□ -0.75
CHMP4A-203ENST00000527154 MZT2BQ6NZ67 158 aa10.38□□□□□ -0.75
CHMP4A-203ENST00000527154 C9orf163Q8N9P6 203 aa10.38□□□□□ -0.75
CHMP4A-203ENST00000527154 LINC01600Q96MT4 127 aa10.38□□□□□ -0.75
CHMP4A-203ENST00000527154 NPCDR1Q9BY65 106 aa10.38□□□□□ -0.75
CHMP4A-203ENST00000527154 OR51M1Q9H341 326 aa10.38□□□□□ -0.75
CHMP4A-203ENST00000527154 MUC2Q02817 5179 aa10.37□□□□□ -0.75
CHMP4A-203ENST00000527154 PLA2G10O15496 165 aa10.37□□□□□ -0.75
CHMP4A-203ENST00000527154 TCRBP04435 133 aa10.37□□□□□ -0.75
CHMP4A-203ENST00000527154 RAB32Q13637 225 aa10.37□□□□□ -0.75
CHMP4A-203ENST00000527154 ZNF876PQ49A33 203 aa10.37□□□□□ -0.75
CHMP4A-203ENST00000527154 CYB561D1Q8N8Q1 229 aa10.37□□□□□ -0.75
CHMP4A-203ENST00000527154 OR10G9Q8NGN4 311 aa10.37□□□□□ -0.75
CHMP4A-203ENST00000527154 CHCHD7Q9BUK0 85 aa10.37□□□□□ -0.75
CHMP4A-203ENST00000527154 TRAV21A0A0B4J279 112 aa10.36□□□□□ -0.75
CHMP4A-203ENST00000527154 A0A0D9SG52 128 aa10.36□□□□□ -0.75
CHMP4A-203ENST00000527154 DIRC3C9JPN6 131 aa10.36□□□□□ -0.75
CHMP4A-203ENST00000527154 MIR17HGQ75NE6 70 aa10.36□□□□□ -0.75
CHMP4A-203ENST00000527154 THAP6Q8TBB0 222 aa10.36□□□□□ -0.75
CHMP4A-203ENST00000527154 LINC00479Q96M42 142 aa10.36□□□□□ -0.75
CHMP4A-203ENST00000527154 C9orf85Q96MD7 179 aa10.36□□□□□ -0.75
CHMP4A-203ENST00000527154 SDF2L1Q9HCN8 221 aa10.36□□□□□ -0.75
CHMP4A-203ENST00000527154 NUDT15Q9NV35 164 aa10.36□□□□□ -0.75
CHMP4A-203ENST00000527154 NAGKQ9UJ70 344 aa10.36□□□□□ -0.75
CHMP4A-203ENST00000527154 UPK1BO75841 260 aa10.35□□□□□ -0.75
CHMP4A-203ENST00000527154 CSN1S1P47710 185 aa10.35□□□□□ -0.75
CHMP4A-203ENST00000527154 IL15RAQ13261 267 aa10.35□□□□□ -0.75
CHMP4A-203ENST00000527154 DGAT2L7PQ6IED9 249 aa10.35□□□□□ -0.75
CHMP4A-203ENST00000527154 SDIM1Q6ZPB5 146 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms