RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 TEX46H3BTG2 121 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 DEFB4AO15263 64 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 LTAP01374 205 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 IGLV2-8P01709 118 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 GPX1P07203 203 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 TSPOP30536 169 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 MEF2BQ02080 365 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-204ENST00000526430 C1orf134Q5TEV5 83 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 Q6AWC8 147 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 PRNTQ86SH4 94 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 C20orf144Q9BQM9 153 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 TXNDC17Q9BRA2 123 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 MLST8Q9BVC4 326 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 VAX2Q9UIW0 290 aa7.73□□□□□ -1.17
NEDD8-204ENST00000526430 IGHV3OR16-12A0A075B7B8 117 aa7.72□□□□□ -1.17
NEDD8-204ENST00000526430 F6UZH7 168 aa7.72□□□□□ -1.17
NEDD8-204ENST00000526430 INSP01308 110 aa7.72□□□□□ -1.17
NEDD8-204ENST00000526430 Q86TA4 180 aa7.72□□□□□ -1.17
NEDD8-204ENST00000526430 FAM210AQ96ND0 272 aa7.72□□□□□ -1.17
NEDD8-204ENST00000526430 LINC00467Q9BRT7 94 aa7.72□□□□□ -1.17
NEDD8-204ENST00000526430 TREM1Q9NP99 234 aa7.72□□□□□ -1.17
NEDD8-204ENST00000526430 RAB19A4D1S5 217 aa7.71□□□□□ -1.18
NEDD8-204ENST00000526430 SMIM9A6NGZ8 99 aa7.71□□□□□ -1.18
NEDD8-204ENST00000526430 FBLL1A6NHQ2 334 aaKnown RBP7.71□□□□□ -1.18
NEDD8-204ENST00000526430 H7BYZ3 331 aa7.71□□□□□ -1.18
NEDD8-204ENST00000526430 MIFP14174 115 aa7.71□□□□□ -1.18
NEDD8-204ENST00000526430 TAS2R60P59551 318 aa7.71□□□□□ -1.18
NEDD8-204ENST00000526430 Q6ZTC4 211 aa7.71□□□□□ -1.18
NEDD8-204ENST00000526430 RNASE8Q8TDE3 154 aaKnown RBP7.71□□□□□ -1.18
NEDD8-204ENST00000526430 ZC2HC1AQ96GY0 325 aa7.71□□□□□ -1.18
NEDD8-204ENST00000526430 LINC01587Q99440 93 aa7.71□□□□□ -1.18
NEDD8-204ENST00000526430 NDUFAF3Q9BU61 184 aa7.71□□□□□ -1.18
NEDD8-204ENST00000526430 TP53TG3Q9ULZ0 132 aa7.71□□□□□ -1.18
NEDD8-204ENST00000526430 GOLT1BQ9Y3E0 138 aa7.71□□□□□ -1.18
NEDD8-204ENST00000526430 K7EQM0 130 aa7.7□□□□□ -1.18
NEDD8-204ENST00000526430 SRP19P09132 144 aaKnown RBP7.7□□□□□ -1.18
NEDD8-204ENST00000526430 AKR1C3P42330 323 aa7.7□□□□□ -1.18
NEDD8-204ENST00000526430 RPL35P42766 123 aaKnown RBP7.7□□□□□ -1.18
NEDD8-204ENST00000526430 TNP2Q05952 138 aa7.7□□□□□ -1.18
NEDD8-204ENST00000526430 CLLU1Q5K131 121 aa7.7□□□□□ -1.18
NEDD8-204ENST00000526430 SAPCD1Q5SSQ6 148 aa7.7□□□□□ -1.18
NEDD8-204ENST00000526430 TMEM183AQ8IXX5 376 aa7.7□□□□□ -1.18
NEDD8-204ENST00000526430 TMEM256Q8N2U0 113 aa7.7□□□□□ -1.18
NEDD8-204ENST00000526430 C11orf72Q8NBR9 251 aa7.7□□□□□ -1.18
NEDD8-204ENST00000526430 FMC1Q96HJ9 113 aa7.7□□□□□ -1.18
NEDD8-204ENST00000526430 CELA1Q9UNI1 258 aa7.7□□□□□ -1.18
NEDD8-204ENST00000526430 ZFP30Q9Y2G7 519 aa7.7□□□□□ -1.18
NEDD8-204ENST00000526430 VPS13BQ7Z7G8 4022 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 IGLV2-18A0A075B6J9 118 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 IGKV3D-20A0A0C4DH25 116 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 GNRH2O43555 120 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 PDE6DO43924 150 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 NDUFS6O75380 124 aaKnown RBP7.69□□□□□ -1.18
NEDD8-204ENST00000526430 GCGP01275 180 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 ZNF674Q2M3X9 581 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 TDRG1Q3Y452 100 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 ANXA2RQ3ZCQ2 193 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 TOR2AQ5JU69 321 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 ZNF767PQ75MW2 155 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 NHLRC2Q8NBF2 726 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 C18orf15Q96N68 181 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 PYGO2Q9BRQ0 406 aa7.69□□□□□ -1.18
NEDD8-204ENST00000526430 IGHV1OR15-1A0A075B7D0 117 aa7.68□□□□□ -1.18
NEDD8-204ENST00000526430 PGPEP1LA6NFU8 196 aa7.68□□□□□ -1.18
NEDD8-204ENST00000526430 RGS13O14921 159 aa7.68□□□□□ -1.18
NEDD8-204ENST00000526430 IFNA1P01562 189 aa7.68□□□□□ -1.18
NEDD8-204ENST00000526430 S100A9P06702 114 aaKnown RBP7.68□□□□□ -1.18
NEDD8-204ENST00000526430 TAGLN2P37802 199 aaKnown RBP7.68□□□□□ -1.18
NEDD8-204ENST00000526430 RRN3P1Q2M238 152 aa7.68□□□□□ -1.18
NEDD8-204ENST00000526430 SMUG1Q53HV7 270 aa7.68□□□□□ -1.18
NEDD8-204ENST00000526430 MUC21Q5SSG8 566 aa7.68□□□□□ -1.18
NEDD8-204ENST00000526430 BAGE2Q86Y30 109 aa7.68□□□□□ -1.18
NEDD8-204ENST00000526430 NIPSNAP3BQ9BS92 247 aa7.68□□□□□ -1.18
NEDD8-204ENST00000526430 MED9Q9NWA0 146 aa7.68□□□□□ -1.18
NEDD8-204ENST00000526430 MDFICQ9P1T7 246 aa7.68□□□□□ -1.18
NEDD8-204ENST00000526430 TMEM250H0YL14 139 aa7.67□□□□□ -1.18
NEDD8-204ENST00000526430 PFN1P07737 140 aaKnown RBP7.67□□□□□ -1.18
NEDD8-204ENST00000526430 HTN1P15515 57 aa7.67□□□□□ -1.18
NEDD8-204ENST00000526430 C12orf74Q32Q52 190 aa7.67□□□□□ -1.18
NEDD8-204ENST00000526430 EIF4E3Q8N5X7 224 aaKnown RBP7.67□□□□□ -1.18
NEDD8-204ENST00000526430 LINC00612Q8N6U2 182 aa7.67□□□□□ -1.18
NEDD8-204ENST00000526430 OCC1Q8TAD7 63 aa7.67□□□□□ -1.18
NEDD8-204ENST00000526430 TMEM208Q9BTX3 173 aa7.67□□□□□ -1.18
NEDD8-204ENST00000526430 DKK2Q9UBU2 259 aa7.67□□□□□ -1.18
NEDD8-204ENST00000526430 DEFB131BA0A096LNP1 70 aa7.66□□□□□ -1.18
NEDD8-204ENST00000526430 TRAV21A0A0B4J279 112 aa7.66□□□□□ -1.18
NEDD8-204ENST00000526430 IGHV3-16A0A0C4DH30 117 aa7.66□□□□□ -1.18
NEDD8-204ENST00000526430 FABP5P3A8MUU1 101 aa7.66□□□□□ -1.18
NEDD8-204ENST00000526430 SH2D1AO60880 128 aa7.66□□□□□ -1.18
NEDD8-204ENST00000526430 TYMSP04818 313 aa7.66□□□□□ -1.18
NEDD8-204ENST00000526430 UBE2G1P62253 170 aa7.66□□□□□ -1.18
NEDD8-204ENST00000526430 RNF212Q495C1 297 aa7.66□□□□□ -1.18
NEDD8-204ENST00000526430 CENPWQ5EE01 88 aa7.66□□□□□ -1.18
NEDD8-204ENST00000526430 ZNF493Q6ZR52 646 aa7.66□□□□□ -1.18
NEDD8-204ENST00000526430 UBE2DNLQ8IWF7 75 aa7.66□□□□□ -1.18
NEDD8-204ENST00000526430 TMEM263Q8WUH6 116 aaKnown RBP7.66□□□□□ -1.18
NEDD8-204ENST00000526430 EIF5A2Q9GZV4 153 aaKnown RBP7.66□□□□□ -1.18
NEDD8-204ENST00000526430 PARLQ9H300 379 aa7.66□□□□□ -1.18
NEDD8-204ENST00000526430 GSN-AS1Q9NRJ2 163 aa7.66□□□□□ -1.18
NEDD8-204ENST00000526430 FAT1Q14517 4588 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms