RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 HIST1H4AP62805 103 aaKnown RBP12.77□□□□□ -0.37
PCDHA3-201ENST00000522353 STPG4Q8N801 248 aa12.77□□□□□ -0.37
PCDHA3-201ENST00000522353 V9GYV3 84 aa12.77□□□□□ -0.37
PCDHA3-201ENST00000522353 A0A096LPF7 62 aa12.76□□□□□ -0.37
PCDHA3-201ENST00000522353 SLURP1P55000 103 aa12.76□□□□□ -0.37
PCDHA3-201ENST00000522353 SPART-AS1P0CW21 52 aa12.76□□□□□ -0.37
PCDHA3-201ENST00000522353 PRSS57Q6UWY2 283 aa12.76□□□□□ -0.37
PCDHA3-201ENST00000522353 DLEU1O43261 78 aa12.76□□□□□ -0.37
PCDHA3-201ENST00000522353 PRR20EP86478 221 aa12.76□□□□□ -0.37
PCDHA3-201ENST00000522353 PRR20CP86479 221 aa12.76□□□□□ -0.37
PCDHA3-201ENST00000522353 PRR20DP86480 221 aa12.76□□□□□ -0.37
PCDHA3-201ENST00000522353 PRR20BP86481 221 aa12.76□□□□□ -0.37
PCDHA3-201ENST00000522353 PRR20AP86496 221 aa12.76□□□□□ -0.37
PCDHA3-201ENST00000522353 U3KQE9 123 aa12.75□□□□□ -0.37
PCDHA3-201ENST00000522353 SMIM27A0A1W2PRY6 76 aa12.75□□□□□ -0.37
PCDHA3-201ENST00000522353 ZFAND6Q6FIF0 208 aa12.75□□□□□ -0.37
PCDHA3-201ENST00000522353 ZNF664Q8N3J9 261 aa12.75□□□□□ -0.37
PCDHA3-201ENST00000522353 WIPF2Q8TF74 440 aaPredicted RBP12.75□□□□□ -0.37
PCDHA3-201ENST00000522353 SMIM2Q9BVW6 85 aa12.75□□□□□ -0.37
PCDHA3-201ENST00000522353 RBAKDNA6NC62 111 aa12.75□□□□□ -0.37
PCDHA3-201ENST00000522353 AJUBAQ96IF1 538 aa12.75□□□□□ -0.37
PCDHA3-201ENST00000522353 MYCNOSP40205 109 aa12.75□□□□□ -0.37
PCDHA3-201ENST00000522353 IGKV2D-24A0A075B6R9 120 aa12.75□□□□□ -0.37
PCDHA3-201ENST00000522353 PRSS29PA6NIE9 313 aa12.75□□□□□ -0.37
PCDHA3-201ENST00000522353 C20orf78Q9BR46 151 aa12.75□□□□□ -0.37
PCDHA3-201ENST00000522353 A0A0J9YY99 117 aa12.74□□□□□ -0.37
PCDHA3-201ENST00000522353 CLPSL1A2RUU4 121 aa12.74□□□□□ -0.37
PCDHA3-201ENST00000522353 CCL18P55774 89 aa12.74□□□□□ -0.37
PCDHA3-201ENST00000522353 HERVK_113P63121 156 aa12.74□□□□□ -0.37
PCDHA3-201ENST00000522353 SEM1Q6ZVN7 128 aa12.74□□□□□ -0.37
PCDHA3-201ENST00000522353 SH2D6Q7Z4S9 175 aa12.74□□□□□ -0.37
PCDHA3-201ENST00000522353 ZC2HC1AQ96GY0 325 aa12.74□□□□□ -0.37
PCDHA3-201ENST00000522353 C20orf144Q9BQM9 153 aa12.74□□□□□ -0.37
PCDHA3-201ENST00000522353 SPRNQ5BIV9 151 aa12.74□□□□□ -0.37
PCDHA3-201ENST00000522353 AGPAT4-IT1Q9H0P7 198 aa12.74□□□□□ -0.37
PCDHA3-201ENST00000522353 F6UB75 175 aa12.74□□□□□ -0.37
PCDHA3-201ENST00000522353 ATP5G1P05496 136 aa12.74□□□□□ -0.37
PCDHA3-201ENST00000522353 PLXND1Q9Y4D7 1925 aa12.73□□□□□ -0.37
PCDHA3-201ENST00000522353 RPL32P62910 135 aaKnown RBP12.73□□□□□ -0.37
PCDHA3-201ENST00000522353 NDUFS6O75380 124 aaKnown RBP12.73□□□□□ -0.37
PCDHA3-201ENST00000522353 OCIAD2Q56VL3 154 aa12.73□□□□□ -0.37
PCDHA3-201ENST00000522353 PRORYQ9H606 182 aa12.73□□□□□ -0.37
PCDHA3-201ENST00000522353 NXPH4O95158 308 aa12.73□□□□□ -0.37
PCDHA3-201ENST00000522353 MRPL23Q16540 153 aaKnown RBP12.73□□□□□ -0.37
PCDHA3-201ENST00000522353 IGKV1OR2-108A0A075B7D4 117 aa12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 TMEM89A2RUT3 159 aa12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 C1orf43Q9BWL3 253 aa12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 DOCK11Q5JSL3 2073 aa12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 C9JAW5 83 aa12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 UBE2V1Q13404 147 aa12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 KRTAP27-1Q3LI81 207 aa12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 Q8NA96 180 aa12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 C16orf74Q96GX8 76 aa12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 ZNF48Q96MX3 618 aaPredicted RBP12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 TRAV26-2A0A0B4J265 109 aa12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 LGALS9BQ3B8N2 356 aa12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 LGALS9CQ6DKI2 356 aa12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 C5orf56Q8N8D9 126 aa12.72□□□□□ -0.37
PCDHA3-201ENST00000522353 IGLV11-55A0A075B6I3 123 aa12.71□□□□□ -0.37
PCDHA3-201ENST00000522353 DYNAPQ8N1N2 210 aa12.71□□□□□ -0.37
PCDHA3-201ENST00000522353 Q8N9W7 124 aa12.71□□□□□ -0.37
PCDHA3-201ENST00000522353 NDUFA12Q9UI09 145 aa12.71□□□□□ -0.37
PCDHA3-201ENST00000522353 APRG1Q8IVJ8 170 aa12.71□□□□□ -0.37
PCDHA3-201ENST00000522353 INAFM2P0DMQ5 153 aa12.7□□□□□ -0.38
PCDHA3-201ENST00000522353 TNCP24821 2201 aa12.7□□□□□ -0.38
PCDHA3-201ENST00000522353 TRBV20-1A0A075B6N2 111 aa12.7□□□□□ -0.38
PCDHA3-201ENST00000522353 TRAV25A0A0B4J276 109 aa12.7□□□□□ -0.38
PCDHA3-201ENST00000522353 LRRC75A-AS1Q8N1F1 130 aa12.7□□□□□ -0.38
PCDHA3-201ENST00000522353 H3BMM0 161 aa12.7□□□□□ -0.38
PCDHA3-201ENST00000522353 LOXL1Q08397 574 aaPredicted RBP12.7□□□□□ -0.38
PCDHA3-201ENST00000522353 UBE2WQ96B02 151 aa12.7□□□□□ -0.38
PCDHA3-201ENST00000522353 SIGLEC8Q9NYZ4 499 aa12.7□□□□□ -0.38
PCDHA3-201ENST00000522353 ICOSQ9Y6W8 199 aa12.7□□□□□ -0.38
PCDHA3-201ENST00000522353 WNK1Q9H4A3 2382 aa12.7□□□□□ -0.38
PCDHA3-201ENST00000522353 POLR3KQ9Y2Y1 108 aaPredicted RBP12.69□□□□□ -0.38
PCDHA3-201ENST00000522353 UBE2BP63146 152 aa12.69□□□□□ -0.38
PCDHA3-201ENST00000522353 GAGE2AQ6NT46 116 aa12.69□□□□□ -0.38
PCDHA3-201ENST00000522353 F8VRH5 84 aa12.69□□□□□ -0.38
PCDHA3-201ENST00000522353 HLA-DMBP28068 263 aa12.69□□□□□ -0.38
PCDHA3-201ENST00000522353 Q6ZSR3 168 aa12.69□□□□□ -0.38
PCDHA3-201ENST00000522353 IGFBPL1Q8WX77 278 aa12.69□□□□□ -0.38
PCDHA3-201ENST00000522353 K7EIM0 57 aa12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 NPYP01303 97 aa12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 LTAP01374 205 aa12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 FGF23Q9GZV9 251 aaPredicted RBP12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 I3L2K1 104 aa12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 INSL3P51460 131 aa12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 Q9HAA7 133 aa12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 SOCS3O14543 225 aa12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 PRO3102Q9H379 93 aa12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 K7EMT4 169 aa12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 IL15RAQ13261 267 aa12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 C17orf77Q96MU5 243 aa12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 SMAD5-AS1Q9Y6J3 95 aa12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 GNRH2O43555 120 aa12.68□□□□□ -0.38
PCDHA3-201ENST00000522353 WIPF3A6NGB9 483 aa12.67□□□□□ -0.38
PCDHA3-201ENST00000522353 IGLV2-23P01705 113 aa12.67□□□□□ -0.38
PCDHA3-201ENST00000522353 ZFP36P26651 326 aaKnown RBP12.67□□□□□ -0.38
PCDHA3-201ENST00000522353 CTSGP08311 255 aa12.67□□□□□ -0.38
PCDHA3-201ENST00000522353 CLPSL2Q6UWE3 100 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms