RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 COL5A3P25940 1745 aaPredicted RBP2.35□□□□□ -2.03
SKP1-208ENST00000521216 RICTORQ6R327 1708 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 TRBV19A0A075B6N1 114 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 TRBV20-1A0A075B6N2 111 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 TRAV12-2A0A075B6T6 113 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 TRAV27A0A087WT01 109 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 TRAV13-1A0A0B4J241 112 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 FAM240AA0A1B0GVK7 77 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 FAM24AA6NFZ4 105 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 K7EQS6 105 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 IGHV3-7P01780 117 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 PRH1P02810 166 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 PYYP10082 97 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 COX7CP15954 63 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 PPP1CCP36873 323 aaKnown RBP2.35□□□□□ -2.03
SKP1-208ENST00000521216 CAV3P56539 151 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 UBE2G1P62253 170 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 MRPS36P82909 103 aaKnown RBP2.35□□□□□ -2.03
SKP1-208ENST00000521216 WFDC2Q14508 124 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 C12orf74Q32Q52 190 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 LINC01545Q5VT33 79 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 FKBP1CQ5VVH2 108 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 RPL7L1Q6DKI1 246 aaKnown RBP2.35□□□□□ -2.03
SKP1-208ENST00000521216 Q6ZS49 121 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 AAED1Q7RTV5 226 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 TEN1Q86WV5 123 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 PRR15Q8IV56 129 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 SBSPONQ8IVN8 264 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 CLDND2Q8NHS1 167 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 RPS4Y2Q8TD47 263 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 FMC1Q96HJ9 113 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 C2orf50Q96LR7 162 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 TMEM147Q9BVK8 224 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 GNB1LQ9BYB4 327 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 AGPAT4-IT1Q9H0P7 198 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 KMT2EQ8IZD2 1858 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 LTBP4Q8N2S1 1624 aa2.35□□□□□ -2.03
SKP1-208ENST00000521216 CACNA1DQ01668 2161 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 ZNF407Q9C0G0 2248 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 TNRC6AQ8NDV7 1962 aaKnown RBP2.34□□□□□ -2.03
SKP1-208ENST00000521216 CCDC88CQ9P219 2028 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 BCORQ6W2J9 1755 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 ARFGEF1Q9Y6D6 1849 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 TRAV4A0A0B4J268 109 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 TRBV7-6A0A0J9YX20 115 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 NUPR1O60356 82 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 PGLYRP1O75594 196 aaPredicted RBP2.34□□□□□ -2.03
SKP1-208ENST00000521216 NDUFB2O95178 105 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 RBP4P02753 201 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 FGF6P10767 208 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 CBLN1P23435 193 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 SMIM11AP58511 58 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 SNRPFP62306 86 aaKnown RBP2.34□□□□□ -2.03
SKP1-208ENST00000521216 HBG1P69891 147 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 HBG2P69892 147 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 CDK5R1Q15078 307 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 ELOCQ15369 112 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 RTL8BQ17RB0 113 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 FBXL19-AS1Q494R0 122 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 CFAP126Q5VTH2 177 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 C22orf39Q6P5X5 142 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 MSRB3Q8IXL7 192 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 HIGD1BQ9P298 99 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 SERP1Q9Y6X1 66 aa2.34□□□□□ -2.03
SKP1-208ENST00000521216 MAST2Q6P0Q8 1798 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 DLEC1Q9Y238 1755 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 CD163L1Q9NR16 1453 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 NUP210Q8TEM1 1887 aaPredicted RBP2.33□□□□□ -2.04
SKP1-208ENST00000521216 MCM3APO60318 1980 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 IGHV1-24A0A0C4DH33 117 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 FAM236AA0A1B0GUQ0 79 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 FAM236BA0A1B0GV22 79 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 A8MT66 165 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 ATOX1O00244 68 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 LYZL6O75951 148 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 CST7O76096 145 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 CD3DP04234 171 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 GYPBP06028 91 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 ACYP1P07311 99 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 HLA-DRB4P13762 266 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 LGALS3P17931 250 aaKnown RBP2.33□□□□□ -2.04
SKP1-208ENST00000521216 QRFPP83859 136 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 ZNF791Q3KP31 576 aaPredicted RBP2.33□□□□□ -2.04
SKP1-208ENST00000521216 HCP5Q6MZN7 132 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 C2orf91Q6ZV80 131 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 OR5AS1Q8N127 324 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 FAM213BQ8TBF2 198 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 FGF13Q92913 245 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 FXYD5Q96DB9 178 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 BORCS8Q96FH0 119 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 CARD19Q96LW7 228 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 MGST2Q99735 147 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 TXNDC17Q9BRA2 123 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 FAM60AQ9NP50 221 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 SLC39A9Q9NUM3 307 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 HLA-DRB4X5D2U9 266 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 LOC285556D6RIA3 1793 aa2.33□□□□□ -2.04
SKP1-208ENST00000521216 COL1A1P02452 1464 aaPredicted RBP2.33□□□□□ -2.04
SKP1-208ENST00000521216 MIA3Q5JRA6 1907 aa2.32□□□□□ -2.04
SKP1-208ENST00000521216 NUP205Q92621 2012 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms