RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 NUP98P52948 1817 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 DNMBPQ6XZF7 1577 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 A2ML1A8K2U0 1454 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 IFT140Q96RY7 1462 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 MBD5Q9P267 1494 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 A0A087WSZ3 146 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 TRAV27A0A087WT01 109 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 A0A0G2JMM0 328 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 A0A1W2PPB8 328 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 OR2T8A6NH00 312 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 KIR3DP1A8MWS1 328 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 H3BMG7 143 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 LINC00032P0C843 101 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 LYNX1P0DP58 116 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 ETV6P41212 452 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 FOXA3P55318 350 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 HBBP68871 147 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 LINC01545Q5VT33 79 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 FOXI2Q6ZQN5 318 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 LINC00305Q7Z4B0 112 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 TEX29Q8N6K0 151 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 SDF2Q99470 211 aa1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 NOP16Q9Y3C1 178 aaKnown RBP1.78□□□□□ -2.12
HMGB1P46-201ENST00000520062 PTPRDP23468 1912 aa1.78□□□□□ -2.13
HMGB1P46-201ENST00000520062 HELZP42694 1942 aaKnown RBP1.78□□□□□ -2.13
HMGB1P46-201ENST00000520062 ADGRB2O60241 1585 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 EEA1Q15075 1411 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 TRIOBPQ9H2D6 2365 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 TRAV13-1A0A0B4J241 112 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 LOC100130705A0A1B0GUX0 176 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 TCRBV3S1A0A5B6 114 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 ODAMA1E959 279 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 ZNF727A8MUV8 499 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 GEMIN2O14893 280 aaKnown RBP1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 INE1O15225 51 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 YPEL1O60688 119 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 MT-ND4LP03901 98 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 TRAPPC2P0DI81 140 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 TRAPPC2BP0DI82 140 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 PYYP10082 97 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 FABP2P12104 132 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 S100A10P60903 97 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 PYY3Q5JQD4 70 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 CLLU1Q5K131 121 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 IZUMO2Q6UXV1 221 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 C10orf111Q8N326 155 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 TTC9CQ8N5M4 171 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 C5orf17Q8NAS9 161 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 POP5Q969H6 163 aaKnown RBP1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 RAB37Q96AX2 223 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 CHCHD1Q96BP2 118 aaKnown RBP1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 DPY30Q9C005 99 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 BANF2Q9H503 90 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 NAA60Q9H7X0 242 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 SAR1AQ9NR31 198 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 RNF11Q9Y3C5 154 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 AP4S1Q9Y587 144 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 MCM3APO60318 1980 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 SBF2Q86WG5 1849 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 RGPD4Q7Z3J3 1758 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 ABCA3Q99758 1704 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 TRPM1Q7Z4N2 1603 aa1.77□□□□□ -2.13
HMGB1P46-201ENST00000520062 THOC2Q8NI27 1593 aaKnown RBP1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 MED12LQ86YW9 2145 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 DSPPQ9NZW4 1301 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 TRBV27A0A0K0K1C4 114 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 B4DSR2 109 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 M0R233 179 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 UQCRQO14949 82 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 RER1O15258 196 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 IGLV1-51P01701 117 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 CD14P08571 375 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 SPINK8P0C7L1 97 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 IFITM1P13164 125 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 KLRD1Q13241 179 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 ZNF833PQ6ZTB9 187 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 SVBPQ8N300 66 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 KCNRGQ8N5I3 272 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 Q8N814 137 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 BRK1Q8WUW1 75 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 PATE1Q8WXA2 126 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 DPH3Q96FX2 82 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 AQP10Q96PS8 301 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 CIB3Q96Q77 187 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 SEC11CQ9BY50 192 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 RBBP6Q7Z6E9 1792 aaKnown RBP1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 DIDO1Q9BTC0 2240 aaKnown RBP1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 RP1P56715 2156 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 ABCC3O15438 1527 aa1.76□□□□□ -2.13
HMGB1P46-201ENST00000520062 TEX14Q8IWB6 1497 aa1.75□□□□□ -2.13
HMGB1P46-201ENST00000520062 TRAV12-2A0A075B6T6 113 aa1.75□□□□□ -2.13
HMGB1P46-201ENST00000520062 TRAV10A0A0B4J240 114 aa1.75□□□□□ -2.13
HMGB1P46-201ENST00000520062 TMEM262E9PQX1 116 aa1.75□□□□□ -2.13
HMGB1P46-201ENST00000520062 APOC4-APOC2K7ER74 178 aa1.75□□□□□ -2.13
HMGB1P46-201ENST00000520062 CCL16O15467 120 aa1.75□□□□□ -2.13
HMGB1P46-201ENST00000520062 MPC2O95563 127 aa1.75□□□□□ -2.13
HMGB1P46-201ENST00000520062 APOC2P02655 101 aa1.75□□□□□ -2.13
HMGB1P46-201ENST00000520062 HLA-DRB4P13762 266 aa1.75□□□□□ -2.13
HMGB1P46-201ENST00000520062 UBA52P62987 128 aaKnown RBP1.75□□□□□ -2.13
HMGB1P46-201ENST00000520062 DCDP81605 110 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms