RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 TMEM262E9PQX1 116 aa5.49□□□□□ -1.53
CLCN3-208ENST00000512813 CIB2O75838 187 aa5.49□□□□□ -1.53
CLCN3-208ENST00000512813 TYMSP04818 313 aa5.49□□□□□ -1.53
CLCN3-208ENST00000512813 AKR1C4P17516 323 aa5.49□□□□□ -1.53
CLCN3-208ENST00000512813 PRSS3P35030 304 aa5.49□□□□□ -1.53
CLCN3-208ENST00000512813 PRSS48Q7RTY5 328 aa5.49□□□□□ -1.53
CLCN3-208ENST00000512813 ARL6IP6Q8N6S5 226 aa5.49□□□□□ -1.53
CLCN3-208ENST00000512813 OR10G7Q8NGN6 311 aa5.49□□□□□ -1.53
CLCN3-208ENST00000512813 ZFAND1Q8TCF1 268 aa5.49□□□□□ -1.53
CLCN3-208ENST00000512813 RETNLBQ9BQ08 111 aa5.49□□□□□ -1.53
CLCN3-208ENST00000512813 NAGKQ9UJ70 344 aa5.49□□□□□ -1.53
CLCN3-208ENST00000512813 IGLV7-46A0A075B6I9 117 aa5.48□□□□□ -1.53
CLCN3-208ENST00000512813 IGLV7-43P04211 117 aa5.48□□□□□ -1.53
CLCN3-208ENST00000512813 IAPPP10997 89 aa5.48□□□□□ -1.53
CLCN3-208ENST00000512813 CLPSL2Q6UWE3 100 aa5.48□□□□□ -1.53
CLCN3-208ENST00000512813 ZFP2Q6ZN57 461 aa5.48□□□□□ -1.53
CLCN3-208ENST00000512813 OR13C8Q8NGS7 320 aa5.48□□□□□ -1.53
CLCN3-208ENST00000512813 C9orf85Q96MD7 179 aa5.48□□□□□ -1.53
CLCN3-208ENST00000512813 NAA60Q9H7X0 242 aa5.48□□□□□ -1.53
CLCN3-208ENST00000512813 CARHSP1Q9Y2V2 147 aaKnown RBP5.48□□□□□ -1.53
CLCN3-208ENST00000512813 TRBV19A0A075B6N1 114 aa5.47□□□□□ -1.53
CLCN3-208ENST00000512813 A0A087WWL8 130 aa5.47□□□□□ -1.53
CLCN3-208ENST00000512813 SMCO3A2RU48 225 aa5.47□□□□□ -1.53
CLCN3-208ENST00000512813 FAM24AA6NFZ4 105 aa5.47□□□□□ -1.53
CLCN3-208ENST00000512813 NDUFB4O95168 129 aa5.47□□□□□ -1.53
CLCN3-208ENST00000512813 S100A16Q96FQ6 103 aaKnown RBP5.47□□□□□ -1.53
CLCN3-208ENST00000512813 GFRA4Q9GZZ7 299 aa5.47□□□□□ -1.53
CLCN3-208ENST00000512813 SCN3BQ9NY72 215 aa5.47□□□□□ -1.53
CLCN3-208ENST00000512813 COX7A2P2O60397 106 aa5.46□□□□□ -1.54
CLCN3-208ENST00000512813 RPP30P78346 268 aaKnown RBP5.46□□□□□ -1.54
CLCN3-208ENST00000512813 PDE6HQ13956 83 aa5.46□□□□□ -1.54
CLCN3-208ENST00000512813 ZNF506Q5JVG8 444 aa5.46□□□□□ -1.54
CLCN3-208ENST00000512813 C14orf178Q8N769 122 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-208ENST00000512813 C15orf56Q8N910 161 aa5.46□□□□□ -1.54
CLCN3-208ENST00000512813 OR51S1Q8NGJ8 323 aa5.46□□□□□ -1.54
CLCN3-208ENST00000512813 OR2T35Q8NGX2 323 aa5.46□□□□□ -1.54
CLCN3-208ENST00000512813 PTH2Q96A98 100 aa5.46□□□□□ -1.54
CLCN3-208ENST00000512813 PARLQ9H300 379 aa5.46□□□□□ -1.54
CLCN3-208ENST00000512813 TXNL4BQ9NX01 149 aaKnown RBP5.46□□□□□ -1.54
CLCN3-208ENST00000512813 PKIGQ9Y2B9 76 aa5.46□□□□□ -1.54
CLCN3-208ENST00000512813 WRBO00258 174 aa5.45□□□□□ -1.54
CLCN3-208ENST00000512813 PKIAP61925 76 aa5.45□□□□□ -1.54
CLCN3-208ENST00000512813 LINC00269Q8N2A0 174 aa5.45□□□□□ -1.54
CLCN3-208ENST00000512813 EXOC3-AS1Q8N2X6 119 aa5.45□□□□□ -1.54
CLCN3-208ENST00000512813 OR2G3Q8NGZ4 309 aa5.45□□□□□ -1.54
CLCN3-208ENST00000512813 RAB2BQ8WUD1 216 aa5.45□□□□□ -1.54
CLCN3-208ENST00000512813 CIB3Q96Q77 187 aaPredicted RBP5.45□□□□□ -1.54
CLCN3-208ENST00000512813 TRBV6-8A0A0A6YYG3 113 aa5.44□□□□□ -1.54
CLCN3-208ENST00000512813 A0A0B4J2A0 478 aa5.44□□□□□ -1.54
CLCN3-208ENST00000512813 AGPAT2O15120 278 aa5.44□□□□□ -1.54
CLCN3-208ENST00000512813 GZMBP10144 247 aa5.44□□□□□ -1.54
CLCN3-208ENST00000512813 CAV2P51636 162 aa5.44□□□□□ -1.54
CLCN3-208ENST00000512813 C10orf113Q5VZT2 155 aa5.44□□□□□ -1.54
CLCN3-208ENST00000512813 RPP21Q9H633 154 aaKnown RBP5.44□□□□□ -1.54
CLCN3-208ENST00000512813 AAMDCQ9H7C9 122 aa5.44□□□□□ -1.54
CLCN3-208ENST00000512813 SHPKQ9UHJ6 478 aa5.44□□□□□ -1.54
CLCN3-208ENST00000512813 PGPEP1LA6NFU8 196 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 SDC2P34741 201 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 SEC61BP60468 96 aaKnown RBP5.43□□□□□ -1.54
CLCN3-208ENST00000512813 CYCSP99999 105 aaKnown RBP5.43□□□□□ -1.54
CLCN3-208ENST00000512813 MXD1Q05195 221 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 SLC38A11Q08AI6 406 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 RNASE10Q5GAN6 216 aaKnown RBP5.43□□□□□ -1.54
CLCN3-208ENST00000512813 UBE2NLQ5JXB2 153 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 UFSP1Q6NVU6 142 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 PACRGLQ8N7B6 248 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 TERB2Q8NHR7 220 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 KCNS1Q96KK3 526 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 RTBDNQ9BSG5 229 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-208ENST00000512813 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 MIXL1Q9H2W2 232 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 C14orf166Q9Y224 244 aaKnown RBP5.43□□□□□ -1.54
CLCN3-208ENST00000512813 TIMM9Q9Y5J7 89 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 LENEPQ9Y5L5 61 aa5.43□□□□□ -1.54
CLCN3-208ENST00000512813 TRAV8-4A0A0B4J246 113 aa5.42□□□□□ -1.54
CLCN3-208ENST00000512813 A8MWV9 139 aa5.42□□□□□ -1.54
CLCN3-208ENST00000512813 GOSR2O14653 212 aa5.42□□□□□ -1.54
CLCN3-208ENST00000512813 P01737 135 aa5.42□□□□□ -1.54
CLCN3-208ENST00000512813 AMTP48728 403 aa5.42□□□□□ -1.54
CLCN3-208ENST00000512813 SPANXN5Q5MJ07 72 aa5.42□□□□□ -1.54
CLCN3-208ENST00000512813 PRR27Q6MZM9 219 aa5.42□□□□□ -1.54
CLCN3-208ENST00000512813 LYZL2Q7Z4W2 148 aa5.42□□□□□ -1.54
CLCN3-208ENST00000512813 KRTAP19-1Q8IUB9 90 aa5.42□□□□□ -1.54
CLCN3-208ENST00000512813 ASB13Q8WXK3 278 aa5.42□□□□□ -1.54
CLCN3-208ENST00000512813 S100A14Q9HCY8 104 aa5.42□□□□□ -1.54
CLCN3-208ENST00000512813 PRR13Q9NZ81 148 aa5.42□□□□□ -1.54
CLCN3-208ENST00000512813 TPRKBQ9Y3C4 175 aa5.42□□□□□ -1.54
CLCN3-208ENST00000512813 RBAKDNA6NC62 111 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 H3BP45 60 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 TMEM127O75204 238 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 MED6O75586 246 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 UBE2D3P61077 147 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 UBE2D2P62837 147 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 RBX1P62877 108 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 REG3AQ06141 175 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 KRTAP6-3Q3LI67 103 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 CFAP161Q6P656 301 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 SOSTQ9BQB4 213 aa5.41□□□□□ -1.54
CLCN3-208ENST00000512813 CHCHD5Q9BSY4 110 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms