RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 INE1O15225 51 aa1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 IGKV2D-40P01614 121 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 SURF2Q15527 256 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 C2orf82Q6UX34 121 aa1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 CLECL1Q8IZS7 167 aa1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 PATE1Q8WXA2 126 aa1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 HYLS1Q96M11 299 aa1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 PRO3102Q9H379 93 aa1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 MED31Q9Y3C7 131 aa1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 TNRC18O15417 2968 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P47-201ENST00000511281 CEP192Q8TEP8 1941 aa1.86□□□□□ -2.11
HMGB1P47-201ENST00000511281 HTTP42858 3142 aa1.86□□□□□ -2.11
HMGB1P47-201ENST00000511281 TRAV27A0A087WT01 109 aa1.86□□□□□ -2.11
HMGB1P47-201ENST00000511281 KPNA4O00629 521 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P47-201ENST00000511281 S100A11P31949 105 aa1.86□□□□□ -2.11
HMGB1P47-201ENST00000511281 ZNF93P35789 620 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P47-201ENST00000511281 CDK6Q00534 326 aa1.86□□□□□ -2.11
HMGB1P47-201ENST00000511281 SAMD13Q5VXD3 122 aa1.86□□□□□ -2.11
HMGB1P47-201ENST00000511281 SKA2Q8WVK7 121 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P47-201ENST00000511281 MCEEQ96PE7 176 aa1.86□□□□□ -2.11
HMGB1P47-201ENST00000511281 TCEAL2Q9H3H9 227 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P47-201ENST00000511281 GINS2Q9Y248 185 aa1.86□□□□□ -2.11
HMGB1P47-201ENST00000511281 MKI67P46013 3256 aaKnown RBP1.86□□□□□ -2.11
HMGB1P47-201ENST00000511281 TRAV10A0A0B4J240 114 aa1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 IGHV1-58A0A0C4DH39 117 aa1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 MIF4GDA9UHW6 222 aaKnown RBP1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 GABARAPH6UMI1 98 aa1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 S100GP29377 79 aa1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 FAM216BQ8N7L0 139 aa1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 GRPEL2Q8TAA5 225 aa1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 MAGOHBQ96A72 148 aaKnown RBP1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 MUCL1Q96DR8 90 aa1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 CCDC115Q96NT0 180 aa1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 HSPB11Q9Y547 144 aa1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 FREM3P0C091 2139 aa1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 DDX60LQ5H9U9 1706 aaKnown RBP1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 CENPFP49454 3210 aa1.85□□□□□ -2.11
HMGB1P47-201ENST00000511281 PHIPQ8WWQ0 1821 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 DOCK2Q92608 1830 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 TNRC6BQ9UPQ9 1833 aaKnown RBP1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 DOCK1Q14185 1865 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 M0R233 179 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 CCL16O15467 120 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 ERC2-IT1O76042 136 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 PAEPP09466 180 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 CXCL8P10145 99 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 IL9P15248 144 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 RPL7P18124 248 aaKnown RBP1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 RPS28P62857 69 aaKnown RBP1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 TEX261Q6UWH6 196 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 DEFB123Q8N688 67 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 TMEM35BQ8NCS4 154 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 C10orf105Q8TEF2 133 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 DIRC1Q969H9 104 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 U3KQ87 197 aa1.84□□□□□ -2.11
HMGB1P47-201ENST00000511281 LOC285556D6RIA3 1793 aa1.84□□□□□ -2.12
HMGB1P47-201ENST00000511281 PLXNB2O15031 1838 aa1.84□□□□□ -2.12
HMGB1P47-201ENST00000511281 MGAMO43451 1857 aa1.84□□□□□ -2.12
HMGB1P47-201ENST00000511281 TRIOBPQ9H2D6 2365 aa1.84□□□□□ -2.12
HMGB1P47-201ENST00000511281 PLXNA4Q9HCM2 1894 aa1.84□□□□□ -2.12
HMGB1P47-201ENST00000511281 MYO5AQ9Y4I1 1855 aaKnown RBP1.84□□□□□ -2.12
HMGB1P47-201ENST00000511281 ALPK3Q96L96 1907 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 MYH13Q9UKX3 1938 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 KIAA1549Q9HCM3 1950 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 CACNA1BQ00975 2339 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 LAMA4Q16363 1823 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 TRBV7-6A0A0J9YX20 115 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 hDV103S1A0JD37 113 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 CCDC160A6NGH7 325 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 RPS3P23396 243 aaKnown RBP eCLIP1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 GNGT1P63211 74 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 ARPINQ7Z6K5 226 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 CCL4L1Q8NHW4 92 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 C1orf54Q8WWF1 131 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 PYDC1Q8WXC3 89 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 RAB37Q96AX2 223 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 ZC2HC1AQ96GY0 325 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 TAF9BQ9HBM6 251 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 C19orf12Q9NSK7 152 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 PTPRFP10586 1907 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 OTOGLQ3ZCN5 2332 aa1.83□□□□□ -2.12
HMGB1P47-201ENST00000511281 NUP210Q8TEM1 1887 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P47-201ENST00000511281 OR2T8A6NH00 312 aa1.82□□□□□ -2.12
HMGB1P47-201ENST00000511281 LYRM1O43325 122 aa1.82□□□□□ -2.12
HMGB1P47-201ENST00000511281 HRCT1Q6UXD1 115 aa1.82□□□□□ -2.12
HMGB1P47-201ENST00000511281 LINC00526Q96FQ7 95 aa1.82□□□□□ -2.12
HMGB1P47-201ENST00000511281 FAM107BQ9H098 131 aa1.82□□□□□ -2.12
HMGB1P47-201ENST00000511281 SPANXA1Q9NS26 97 aa1.82□□□□□ -2.12
HMGB1P47-201ENST00000511281 Q9Y3F1 56 aa1.82□□□□□ -2.12
HMGB1P47-201ENST00000511281 TECTAO75443 2155 aa1.82□□□□□ -2.12
HMGB1P47-201ENST00000511281 SZT2Q5T011 3432 aa1.82□□□□□ -2.12
HMGB1P47-201ENST00000511281 MYLKQ15746 1914 aa1.81□□□□□ -2.12
HMGB1P47-201ENST00000511281 A0A0G2JMZ2 1700 aa1.81□□□□□ -2.12
HMGB1P47-201ENST00000511281 GEMIN2O14893 280 aaKnown RBP1.81□□□□□ -2.12
HMGB1P47-201ENST00000511281 ANGP03950 147 aaKnown RBP1.81□□□□□ -2.12
HMGB1P47-201ENST00000511281 SDC4P31431 198 aa1.81□□□□□ -2.12
HMGB1P47-201ENST00000511281 SDC2P34741 201 aa1.81□□□□□ -2.12
HMGB1P47-201ENST00000511281 MPV17LQ2QL34 196 aa1.81□□□□□ -2.12
HMGB1P47-201ENST00000511281 TMEM14EPQ6UXP3 125 aa1.81□□□□□ -2.12
HMGB1P47-201ENST00000511281 Q6ZSA8 131 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms