RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 LINC00526Q96FQ7 95 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 NAA38Q9BRA0 125 aaKnown RBP3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 PAXXQ9BUH6 204 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 PRRG4Q9BZD6 226 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 SLC25A39Q9BZJ4 359 aaPredicted RBP3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 ZNF71Q9NQZ8 489 aaPredicted RBP3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 DEPPQ9NTK1 212 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 FZR1Q9UM11 496 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 EPDR1Q9UM22 224 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 FOXA2Q9Y261 457 aaPredicted RBP3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 AKAP9Q99996 3911 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 PCNX3Q9H6A9 2034 aa3.53□□□□□ -1.84
PDLIM5-211ENST00000508531 MTORP42345 2549 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 NCKAP5O14513 1909 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 OTOGQ6ZRI0 2925 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 LOC102723996A0A087X1L8 192 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 LOC107984156A0A0G2JMH3 177 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 A0A1W2PNU3 283 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 C15orf61A6NNL5 157 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 TEX22C9J3V5 150 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 J3QT63 122 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 SPINT2O43291 252 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 COX7A2P2O60397 106 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 RBP4P02753 201 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 P0DMU3 169 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 FAM231AP0DMU4 169 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 FAM231CP0DMU5 169 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 FCER1GP30273 86 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 CFHR2P36980 270 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 CXCL5P42830 114 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 TNFRSF4P43489 277 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 PSMB2P49721 201 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 CCL11P51671 97 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 EIF4EBP1Q13541 118 aaPredicted RBP3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 C3AR1Q16581 482 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 C2orf83Q53S99 150 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 C10orf113Q5VZT2 155 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 LINC00173Q6ZV60 143 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 MIR17HGQ75NE6 70 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 PCP2Q8IVA1 136 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 ARL17AQ8IVW1 177 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 MAPK1IP1LQ8NDC0 245 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 OR1L8Q8NGR8 309 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 RNF138Q8WVD3 245 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 SSMEM1Q8WWF3 244 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 RASL10AQ92737 203 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 NABP1Q96AH0 204 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 TIMD4Q96H15 378 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 PGLYRP4Q96LB8 373 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 TRGV9Q99603 122 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 MRPL20Q9BYC9 149 aaKnown RBP3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 OR2H1Q9GZK4 316 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 PPDPFQ9H3Y8 114 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 TP73-AS1Q9UF72 201 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 F11RQ9Y624 299 aaKnown RBP3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 HIVEP1P15822 2718 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 CELSR1Q9NYQ6 3014 aa3.52□□□□□ -1.85
PDLIM5-211ENST00000508531 RP1L1Q8IWN7 2480 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 TRBV7-3A0A075B6L6 115 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 IGHV3OR15-7A0A075B7D8 119 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 TRAV12-1A0A0B4J245 112 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 SMIM1B2RUZ4 78 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 F5H768 121 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 INS-IGF2F8WCM5 200 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 H3BT86 120 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 ATOX1O00244 68 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 SLC25A20O43772 301 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 CRLF1O75462 422 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 CRYGDP07320 174 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 CECR9P0C854 216 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 SLC25A16P16260 332 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 COL8A2P25067 703 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 DSCR4P56555 118 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 HERVK_113P61574 105 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 MZT1Q08AG7 82 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 ZNF816Q0VGE8 651 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 DIAPH2-AS1Q14236 149 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 ATXN8Q156A1 80 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 ALKBH6Q3KRA9 238 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 ACP7Q6ZNF0 438 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 LYPD1Q8N2G4 141 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 SAP25Q8TEE9 199 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 S1PR3Q99500 378 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 KIR2DL4Q99706 377 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 OTORQ9NRC9 128 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 CHCHD2Q9Y6H1 151 aaPredicted RBP3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 SHANK1Q9Y566 2161 aa3.51□□□□□ -1.85
PDLIM5-211ENST00000508531 IGLV5-45A0A087WSX0 123 aa3.5□□□□□ -1.85
PDLIM5-211ENST00000508531 TRAV24A0A0B4J272 114 aa3.5□□□□□ -1.85
PDLIM5-211ENST00000508531 PGPA6NDG6 321 aa3.5□□□□□ -1.85
PDLIM5-211ENST00000508531 NDUFC2-KCTD14E9PQ53 114 aa3.5□□□□□ -1.85
PDLIM5-211ENST00000508531 H3BMM0 161 aa3.5□□□□□ -1.85
PDLIM5-211ENST00000508531 K7ERJ3 54 aa3.5□□□□□ -1.85
PDLIM5-211ENST00000508531 ZNHIT1O43257 154 aa3.5□□□□□ -1.85
PDLIM5-211ENST00000508531 NGFP01138 241 aa3.5□□□□□ -1.85
PDLIM5-211ENST00000508531 IGHV4-39P01824 125 aa3.5□□□□□ -1.85
PDLIM5-211ENST00000508531 COX6CP09669 75 aa3.5□□□□□ -1.85
PDLIM5-211ENST00000508531 CRYGAP11844 174 aa3.5□□□□□ -1.85
PDLIM5-211ENST00000508531 CKS2P33552 79 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms