RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
LMNA-222ENST00000508500 C9orf47Q6ZRZ4 202 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 FXYD5Q96DB9 178 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 ZNF503Q96F45 646 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 LINC00477Q96M19 166 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 VGLL1Q99990 258 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 TCEAL7Q9BRU2 100 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 PAXXQ9BUH6 204 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 SEC11CQ9BY50 192 aa11.26□□□□□ -0.61
LMNA-222ENST00000508500 A0A0J9YY99 117 aa11.25□□□□□ -0.61
LMNA-222ENST00000508500 SNURFLB1AK76 121 aa11.25□□□□□ -0.61
LMNA-222ENST00000508500 PDE6DO43924 150 aa11.25□□□□□ -0.61
LMNA-222ENST00000508500 NBEAP1P0C6P0 100 aa11.25□□□□□ -0.61
LMNA-222ENST00000508500 CRISP2P16562 243 aa11.25□□□□□ -0.61
LMNA-222ENST00000508500 TNP2Q05952 138 aa11.25□□□□□ -0.61
LMNA-222ENST00000508500 C10orf91Q5T1B1 145 aa11.25□□□□□ -0.61
LMNA-222ENST00000508500 ZNF575Q86XF7 245 aa11.25□□□□□ -0.61
LMNA-222ENST00000508500 ZFAND2AQ8N6M9 145 aa11.25□□□□□ -0.61
LMNA-222ENST00000508500 RXFP4Q8TDU9 374 aa11.25□□□□□ -0.61
LMNA-222ENST00000508500 LINC00467Q9BRT7 94 aa11.25□□□□□ -0.61
LMNA-222ENST00000508500 TMPRSS5Q9H3S3 457 aa11.25□□□□□ -0.61
LMNA-222ENST00000508500 GSN-AS1Q9NRJ2 163 aa11.25□□□□□ -0.61
LMNA-222ENST00000508500 HSPG2P98160 4391 aa11.24□□□□□ -0.61
LMNA-222ENST00000508500 F6UZH7 168 aa11.24□□□□□ -0.61
LMNA-222ENST00000508500 OR10J4P0C629 311 aa11.24□□□□□ -0.61
LMNA-222ENST00000508500 RNASE4P34096 147 aaKnown RBP11.24□□□□□ -0.61
LMNA-222ENST00000508500 CCL18P55774 89 aa11.24□□□□□ -0.61
LMNA-222ENST00000508500 IQCF2Q8IXL9 164 aa11.24□□□□□ -0.61
LMNA-222ENST00000508500 KRTAP1-5Q9BYS1 174 aa11.24□□□□□ -0.61
LMNA-222ENST00000508500 TP53TG3Q9ULZ0 132 aa11.24□□□□□ -0.61
LMNA-222ENST00000508500 PAGE4O60829 102 aa11.23□□□□□ -0.61
LMNA-222ENST00000508500 SRP19P09132 144 aaKnown RBP11.23□□□□□ -0.61
LMNA-222ENST00000508500 UBE2L3P68036 154 aaKnown RBP11.23□□□□□ -0.61
LMNA-222ENST00000508500 SRSF3P84103 164 aaKnown RBP11.23□□□□□ -0.61
LMNA-222ENST00000508500 ESRGQ1W209 222 aa11.23□□□□□ -0.61
LMNA-222ENST00000508500 ANXA2RQ3ZCQ2 193 aa11.23□□□□□ -0.61
LMNA-222ENST00000508500 SOHLH1Q5JUK2 328 aa11.23□□□□□ -0.61
LMNA-222ENST00000508500 VSIG2Q96IQ7 327 aa11.23□□□□□ -0.61
LMNA-222ENST00000508500 AAMDCQ9H7C9 122 aa11.23□□□□□ -0.61
LMNA-222ENST00000508500 CARHSP1Q9Y2V2 147 aaKnown RBP11.23□□□□□ -0.61
LMNA-222ENST00000508500 KLF12Q9Y4X4 402 aa11.23□□□□□ -0.61
LMNA-222ENST00000508500 FAM74A7A6NL05 159 aa11.22□□□□□ -0.61
LMNA-222ENST00000508500 SFTA3P0C7M3 94 aa11.22□□□□□ -0.61
LMNA-222ENST00000508500 FAM74A3Q4VXF1 159 aa11.22□□□□□ -0.61
LMNA-222ENST00000508500 LYPD1Q8N2G4 141 aa11.22□□□□□ -0.61
LMNA-222ENST00000508500 C6orf223Q8N319 242 aa11.22□□□□□ -0.61
LMNA-222ENST00000508500 C18orf15Q96N68 181 aa11.22□□□□□ -0.61
LMNA-222ENST00000508500 ZNF492Q9P255 531 aa11.22□□□□□ -0.61
LMNA-222ENST00000508500 F8W036 122 aa11.21□□□□□ -0.61
LMNA-222ENST00000508500 H3BNG1 76 aa11.21□□□□□ -0.61
LMNA-222ENST00000508500 SPINK4O60575 86 aa11.21□□□□□ -0.61
LMNA-222ENST00000508500 EIF3GO75821 320 aaKnown RBP eCLIP11.21□□□□□ -0.61
LMNA-222ENST00000508500 GPX1P07203 203 aa11.21□□□□□ -0.61
LMNA-222ENST00000508500 ARL6IP6Q8N6S5 226 aa11.21□□□□□ -0.61
LMNA-222ENST00000508500 Q9H8V8 135 aa11.21□□□□□ -0.61
LMNA-222ENST00000508500 DNAH5Q8TE73 4624 aa11.21□□□□□ -0.62
LMNA-222ENST00000508500 TCL1AP56279 114 aa11.2□□□□□ -0.62
LMNA-222ENST00000508500 TMEM78Q5T7P6 136 aa11.2□□□□□ -0.62
LMNA-222ENST00000508500 CST9LP1Q5W188 147 aa11.2□□□□□ -0.62
LMNA-222ENST00000508500 Q8TAT8 98 aa11.2□□□□□ -0.62
LMNA-222ENST00000508500 A0A096LPF7 62 aa11.19□□□□□ -0.62
LMNA-222ENST00000508500 TRGV1A0A0A0MS02 117 aa11.19□□□□□ -0.62
LMNA-222ENST00000508500 C9JQL5 133 aa11.19□□□□□ -0.62
LMNA-222ENST00000508500 C11orf52Q96A22 123 aa11.19□□□□□ -0.62
LMNA-222ENST00000508500 UPK3BQ9BT76 320 aa11.19□□□□□ -0.62
LMNA-222ENST00000508500 IGHV1OR15-1A0A075B7D0 117 aa11.18□□□□□ -0.62
LMNA-222ENST00000508500 ZNF138P52744 262 aa11.18□□□□□ -0.62
LMNA-222ENST00000508500 UBE2G2P60604 165 aa11.18□□□□□ -0.62
LMNA-222ENST00000508500 RANP62826 216 aaKnown RBP11.18□□□□□ -0.62
LMNA-222ENST00000508500 IBA57Q5T440 356 aaKnown RBP11.18□□□□□ -0.62
LMNA-222ENST00000508500 SVBPQ8N300 66 aa11.18□□□□□ -0.62
LMNA-222ENST00000508500 Q9H3A6 140 aa11.18□□□□□ -0.62
LMNA-222ENST00000508500 APOBP04114 4563 aaKnown RBP11.18□□□□□ -0.62
LMNA-222ENST00000508500 TRGV2A0A075B6R0 118 aa11.17□□□□□ -0.62
LMNA-222ENST00000508500 CYB561D1Q8N8Q1 229 aa11.17□□□□□ -0.62
LMNA-222ENST00000508500 HIST1H2BAQ96A08 127 aa11.17□□□□□ -0.62
LMNA-222ENST00000508500 OTORQ9NRC9 128 aa11.17□□□□□ -0.62
LMNA-222ENST00000508500 MRPL16Q9NX20 251 aaKnown RBP11.17□□□□□ -0.62
LMNA-222ENST00000508500 MRPS16Q9Y3D3 137 aaKnown RBP11.17□□□□□ -0.62
LMNA-222ENST00000508500 TRBV7-9A0A0J9YWB2 115 aa11.16□□□□□ -0.62
LMNA-222ENST00000508500 RBAKDNA6NC62 111 aa11.16□□□□□ -0.62
LMNA-222ENST00000508500 SNAPINO95295 136 aa11.16□□□□□ -0.62
LMNA-222ENST00000508500 S100A9P06702 114 aaKnown RBP11.16□□□□□ -0.62
LMNA-222ENST00000508500 ADCYAP1P18509 176 aa11.16□□□□□ -0.62
LMNA-222ENST00000508500 SUMO1P63165 101 aaKnown RBP11.16□□□□□ -0.62
LMNA-222ENST00000508500 PNRC1Q12796 327 aaPredicted RBP11.16□□□□□ -0.62
LMNA-222ENST00000508500 C5orf17Q8NAS9 161 aa11.16□□□□□ -0.62
LMNA-222ENST00000508500 DIRC3C9JPN6 131 aa11.15□□□□□ -0.62
LMNA-222ENST00000508500 APOC3P02656 99 aa11.15□□□□□ -0.62
LMNA-222ENST00000508500 MUC21Q5SSG8 566 aa11.15□□□□□ -0.62
LMNA-222ENST00000508500 MDFICQ9P1T7 246 aa11.15□□□□□ -0.62
LMNA-222ENST00000508500 SERTM2A0A1B0GWG4 89 aa11.14□□□□□ -0.63
LMNA-222ENST00000508500 ZNF727A8MUV8 499 aa11.14□□□□□ -0.63
LMNA-222ENST00000508500 GGTLC3B5MD39 225 aa11.14□□□□□ -0.63
LMNA-222ENST00000508500 IGHV3-53P01767 116 aa11.14□□□□□ -0.63
LMNA-222ENST00000508500 FHL2Q14192 279 aa11.14□□□□□ -0.63
LMNA-222ENST00000508500 LY96Q9Y6Y9 160 aa11.14□□□□□ -0.63
LMNA-222ENST00000508500 PGPA6NDG6 321 aa11.13□□□□□ -0.63
LMNA-222ENST00000508500 FBLL1A6NHQ2 334 aaKnown RBP11.13□□□□□ -0.63
LMNA-222ENST00000508500 B4DEV8 164 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms