RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 DYNC2H1Q8NCM8 4307 aaKnown RBP10.32□□□□□ -0.76
USP11-212ENST00000497179 CXorf65A6NEN9 183 aa10.32□□□□□ -0.76
USP11-212ENST00000497179 SNURFLB1AK76 121 aa10.32□□□□□ -0.76
USP11-212ENST00000497179 C9JCJ5 164 aa10.32□□□□□ -0.76
USP11-212ENST00000497179 SH2D1AO60880 128 aa10.32□□□□□ -0.76
USP11-212ENST00000497179 IGLV2-8P01709 118 aa10.32□□□□□ -0.76
USP11-212ENST00000497179 SRP19P09132 144 aaKnown RBP10.32□□□□□ -0.76
USP11-212ENST00000497179 TCL1AP56279 114 aa10.32□□□□□ -0.76
USP11-212ENST00000497179 NANOS2P60321 138 aaKnown RBP10.32□□□□□ -0.76
USP11-212ENST00000497179 ZNF415Q09FC8 603 aa10.32□□□□□ -0.76
USP11-212ENST00000497179 MUC7Q8TAX7 377 aa10.32□□□□□ -0.76
USP11-212ENST00000497179 PARLQ9H300 379 aa10.32□□□□□ -0.76
USP11-212ENST00000497179 SDF2L1Q9HCN8 221 aa10.32□□□□□ -0.76
USP11-212ENST00000497179 TIMM8BQ9Y5J9 83 aaPredicted RBP10.32□□□□□ -0.76
USP11-212ENST00000497179 CSMD3Q7Z407 3707 aa10.32□□□□□ -0.76
USP11-212ENST00000497179 TYMSP04818 313 aa10.31□□□□□ -0.76
USP11-212ENST00000497179 DAZ2Q13117 558 aaKnown RBP10.31□□□□□ -0.76
USP11-212ENST00000497179 SMDT1Q9H4I9 107 aa10.31□□□□□ -0.76
USP11-212ENST00000497179 GSN-AS1Q9NRJ2 163 aa10.31□□□□□ -0.76
USP11-212ENST00000497179 STARD9Q9P2P6 4700 aa10.3□□□□□ -0.76
USP11-212ENST00000497179 IGHV3-16A0A0C4DH30 117 aa10.3□□□□□ -0.76
USP11-212ENST00000497179 SRSF3P84103 164 aaKnown RBP10.3□□□□□ -0.76
USP11-212ENST00000497179 PEA15Q15121 130 aa10.3□□□□□ -0.76
USP11-212ENST00000497179 C12orf74Q32Q52 190 aa10.3□□□□□ -0.76
USP11-212ENST00000497179 NOP10Q9NPE3 64 aaKnown RBP10.3□□□□□ -0.76
USP11-212ENST00000497179 IGKV3D-20A0A0C4DH25 116 aa10.29□□□□□ -0.76
USP11-212ENST00000497179 PGPEP1LA6NFU8 196 aa10.29□□□□□ -0.76
USP11-212ENST00000497179 C9JQL5 133 aa10.29□□□□□ -0.76
USP11-212ENST00000497179 GNRH2O43555 120 aa10.29□□□□□ -0.76
USP11-212ENST00000497179 CEBPGP53567 150 aa10.29□□□□□ -0.76
USP11-212ENST00000497179 LINC01559Q495D7 138 aa10.29□□□□□ -0.76
USP11-212ENST00000497179 LINC00612Q8N6U2 182 aa10.29□□□□□ -0.76
USP11-212ENST00000497179 MDFICQ9P1T7 246 aa10.29□□□□□ -0.76
USP11-212ENST00000497179 KRBOX1C9JBD0 128 aa10.28□□□□□ -0.76
USP11-212ENST00000497179 C3orf84H3BNL1 204 aa10.28□□□□□ -0.76
USP11-212ENST00000497179 ORM1P02763 201 aa10.28□□□□□ -0.76
USP11-212ENST00000497179 MGST1P10620 155 aaKnown RBP10.28□□□□□ -0.76
USP11-212ENST00000497179 DAD1P61803 113 aa10.28□□□□□ -0.76
USP11-212ENST00000497179 PRR27Q6MZM9 219 aa10.28□□□□□ -0.76
USP11-212ENST00000497179 Q6ZTC4 211 aa10.28□□□□□ -0.76
USP11-212ENST00000497179 SMIM7Q9BQ49 75 aa10.28□□□□□ -0.76
USP11-212ENST00000497179 B4DEV8 164 aa10.27□□□□□ -0.77
USP11-212ENST00000497179 M0R036 132 aa10.27□□□□□ -0.77
USP11-212ENST00000497179 SPINK4O60575 86 aa10.27□□□□□ -0.77
USP11-212ENST00000497179 SPXQ9BT56 116 aa10.27□□□□□ -0.77
USP11-212ENST00000497179 BIN3Q9NQY0 253 aa10.27□□□□□ -0.77
USP11-212ENST00000497179 C19orf71A6NCJ1 209 aa10.26□□□□□ -0.77
USP11-212ENST00000497179 ZNF727A8MUV8 499 aa10.26□□□□□ -0.77
USP11-212ENST00000497179 CXCL1P09341 107 aa10.26□□□□□ -0.77
USP11-212ENST00000497179 DEFB130BP0DP73 79 aa10.26□□□□□ -0.77
USP11-212ENST00000497179 DEFB130AP0DP74 79 aa10.26□□□□□ -0.77
USP11-212ENST00000497179 ASIPP42127 132 aa10.26□□□□□ -0.77
USP11-212ENST00000497179 LGALS9BQ3B8N2 356 aa10.26□□□□□ -0.77
USP11-212ENST00000497179 DNLZQ5SXM8 178 aa10.26□□□□□ -0.77
USP11-212ENST00000497179 Q6ZTI0 123 aa10.26□□□□□ -0.77
USP11-212ENST00000497179 OCC1Q8TAD7 63 aa10.26□□□□□ -0.77
USP11-212ENST00000497179 PHLDA1Q8WV24 401 aaPredicted RBP10.26□□□□□ -0.77
USP11-212ENST00000497179 C9orf85Q96MD7 179 aa10.26□□□□□ -0.77
USP11-212ENST00000497179 LY96Q9Y6Y9 160 aa10.26□□□□□ -0.77
USP11-212ENST00000497179 TENM2Q9NT68 2774 aa10.25□□□□□ -0.77
USP11-212ENST00000497179 TRGV1A0A0A0MS02 117 aa10.25□□□□□ -0.77
USP11-212ENST00000497179 TRAV10A0A0B4J240 114 aa10.25□□□□□ -0.77
USP11-212ENST00000497179 GAGE12BA1L429 117 aa10.25□□□□□ -0.77
USP11-212ENST00000497179 K7EN84 100 aa10.25□□□□□ -0.77
USP11-212ENST00000497179 GAGE7O76087 117 aa10.25□□□□□ -0.77
USP11-212ENST00000497179 GAGE12FP0CL80 117 aa10.25□□□□□ -0.77
USP11-212ENST00000497179 GAGE12GP0CL81 117 aa10.25□□□□□ -0.77
USP11-212ENST00000497179 GAGE12IP0CL82 117 aa10.25□□□□□ -0.77
USP11-212ENST00000497179 RNASE3P12724 160 aaKnown RBP10.25□□□□□ -0.77
USP11-212ENST00000497179 FAM74A3Q4VXF1 159 aa10.25□□□□□ -0.77
USP11-212ENST00000497179 ZFAND6Q6FIF0 208 aa10.25□□□□□ -0.77
USP11-212ENST00000497179 ZNF575Q86XF7 245 aa10.25□□□□□ -0.77
USP11-212ENST00000497179 PLECQ15149 4684 aaKnown RBP10.24□□□□□ -0.77
USP11-212ENST00000497179 TMSB15BA0A087X1C1 80 aa10.24□□□□□ -0.77
USP11-212ENST00000497179 NUPR2A6NF83 97 aa10.24□□□□□ -0.77
USP11-212ENST00000497179 RPL19P84098 196 aaKnown RBP10.24□□□□□ -0.77
USP11-212ENST00000497179 OR5I1Q13606 314 aa10.24□□□□□ -0.77
USP11-212ENST00000497179 DAZAP1Q96EP5 407 aaKnown RBP10.24□□□□□ -0.77
USP11-212ENST00000497179 C18orf15Q96N68 181 aa10.24□□□□□ -0.77
USP11-212ENST00000497179 MRPL16Q9NX20 251 aaKnown RBP10.24□□□□□ -0.77
USP11-212ENST00000497179 DEFB131BA0A096LNP1 70 aa10.23□□□□□ -0.77
USP11-212ENST00000497179 GRIFINA4D1Z8 144 aa10.23□□□□□ -0.77
USP11-212ENST00000497179 M0R2P5 195 aa10.23□□□□□ -0.77
USP11-212ENST00000497179 S100A4P26447 101 aaKnown RBP10.23□□□□□ -0.77
USP11-212ENST00000497179 CASC10Q5T4H9 136 aa10.23□□□□□ -0.77
USP11-212ENST00000497179 CEMP1Q6PRD7 247 aaPredicted RBP10.23□□□□□ -0.77
USP11-212ENST00000497179 LINC01551Q86U37 167 aa10.23□□□□□ -0.77
USP11-212ENST00000497179 PTH2Q96A98 100 aa10.23□□□□□ -0.77
USP11-212ENST00000497179 IL36BQ9NZH7 164 aa10.23□□□□□ -0.77
USP11-212ENST00000497179 H3BVH4 76 aa10.22□□□□□ -0.77
USP11-212ENST00000497179 P01737 135 aa10.22□□□□□ -0.77
USP11-212ENST00000497179 ATP5G1P05496 136 aa10.22□□□□□ -0.77
USP11-212ENST00000497179 MED14OSP0DP75 135 aa10.22□□□□□ -0.77
USP11-212ENST00000497179 SOHLH1Q5JUK2 328 aa10.22□□□□□ -0.77
USP11-212ENST00000497179 RASL10AQ92737 203 aa10.22□□□□□ -0.77
USP11-212ENST00000497179 SCRT2Q9NQ03 307 aa10.22□□□□□ -0.77
USP11-212ENST00000497179 TRGV2A0A075B6R0 118 aa10.21□□□□□ -0.77
USP11-212ENST00000497179 SFTA3P0C7M3 94 aa10.21□□□□□ -0.77
USP11-212ENST00000497179 ARMS2P0C7Q2 107 aa10.21□□□□□ -0.77
USP11-212ENST00000497179 RPS20P60866 119 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms