RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 RRN3P1Q2M238 152 aa9.68□□□□□ -0.86
PTPN7-218ENST00000496197 LINC01551Q86U37 167 aa9.68□□□□□ -0.86
PTPN7-218ENST00000496197 SMIM12Q96EX1 92 aa9.68□□□□□ -0.86
PTPN7-218ENST00000496197 CBY3A6NI87 242 aa9.67□□□□□ -0.86
PTPN7-218ENST00000496197 TDRG1Q3Y452 100 aa9.67□□□□□ -0.86
PTPN7-218ENST00000496197 SOHLH1Q5JUK2 328 aa9.67□□□□□ -0.86
PTPN7-218ENST00000496197 UQCC3Q6UW78 93 aa9.67□□□□□ -0.86
PTPN7-218ENST00000496197 FAM159AQ6UWV7 190 aa9.67□□□□□ -0.86
PTPN7-218ENST00000496197 MDFICQ9P1T7 246 aa9.67□□□□□ -0.86
PTPN7-218ENST00000496197 CELA1Q9UNI1 258 aa9.67□□□□□ -0.86
PTPN7-218ENST00000496197 U3KQK5 164 aa9.67□□□□□ -0.86
PTPN7-218ENST00000496197 TMSB15BA0A087X1C1 80 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 SMIM9A6NGZ8 99 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 KRBOX1C9JBD0 128 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 EMP1P54849 157 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 RPL23P62829 140 aaKnown RBP9.66□□□□□ -0.86
PTPN7-218ENST00000496197 IL17DQ8TAD2 202 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 TMEM263Q8WUH6 116 aaKnown RBP9.66□□□□□ -0.86
PTPN7-218ENST00000496197 RNASE7Q9H1E1 156 aaKnown RBP9.66□□□□□ -0.86
PTPN7-218ENST00000496197 MUC4Q99102 2169 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 TMEM218A2RU14 115 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 ORM1P02763 201 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 LINC01559Q495D7 138 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 FAM74A3Q4VXF1 159 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 C16orf74Q96GX8 76 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 C11orf68Q9H3H3 251 aaKnown RBP9.66□□□□□ -0.86
PTPN7-218ENST00000496197 EDA2RQ9HAV5 297 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 SDF2L1Q9HCN8 221 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 GSN-AS1Q9NRJ2 163 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 LY96Q9Y6Y9 160 aa9.66□□□□□ -0.86
PTPN7-218ENST00000496197 TGP01266 2768 aa9.65□□□□□ -0.87
PTPN7-218ENST00000496197 IGHV3-16A0A0C4DH30 117 aa9.65□□□□□ -0.87
PTPN7-218ENST00000496197 GRIFINA4D1Z8 144 aa9.65□□□□□ -0.87
PTPN7-218ENST00000496197 B4DEV8 164 aa9.65□□□□□ -0.87
PTPN7-218ENST00000496197 RNASE3P12724 160 aaKnown RBP9.65□□□□□ -0.87
PTPN7-218ENST00000496197 TMEM241Q24JQ0 296 aa9.65□□□□□ -0.87
PTPN7-218ENST00000496197 SLC7A5P1Q8MH63 180 aa9.65□□□□□ -0.87
PTPN7-218ENST00000496197 NUDT10Q8NFP7 164 aa9.65□□□□□ -0.87
PTPN7-218ENST00000496197 NUDT11Q96G61 164 aa9.65□□□□□ -0.87
PTPN7-218ENST00000496197 NAT8Q9UHE5 227 aa9.65□□□□□ -0.87
PTPN7-218ENST00000496197 ISOC2Q96AB3 205 aa9.64□□□□□ -0.87
PTPN7-218ENST00000496197 GZMBP10144 247 aa9.63□□□□□ -0.87
PTPN7-218ENST00000496197 TCL1AP56279 114 aa9.63□□□□□ -0.87
PTPN7-218ENST00000496197 ADIRFQ15847 76 aa9.63□□□□□ -0.87
PTPN7-218ENST00000496197 IBA57Q5T440 356 aaKnown RBP9.63□□□□□ -0.87
PTPN7-218ENST00000496197 FAM222AQ5U5X8 452 aa9.63□□□□□ -0.87
PTPN7-218ENST00000496197 KCNS1Q96KK3 526 aa9.63□□□□□ -0.87
PTPN7-218ENST00000496197 NOP10Q9NPE3 64 aaKnown RBP9.63□□□□□ -0.87
PTPN7-218ENST00000496197 TRGV11A0A075B6L2 103 aa9.62□□□□□ -0.87
PTPN7-218ENST00000496197 ZNF493Q6ZR52 646 aa9.62□□□□□ -0.87
PTPN7-218ENST00000496197 DKK2Q9UBU2 259 aa9.62□□□□□ -0.87
PTPN7-218ENST00000496197 NACAE9PAV3 2078 aa9.61□□□□□ -0.87
PTPN7-218ENST00000496197 TMEM189A5PLL7 270 aa9.61□□□□□ -0.87
PTPN7-218ENST00000496197 F8W036 122 aa9.61□□□□□ -0.87
PTPN7-218ENST00000496197 H3BVH4 76 aa9.61□□□□□ -0.87
PTPN7-218ENST00000496197 P01737 135 aa9.61□□□□□ -0.87
PTPN7-218ENST00000496197 ZNF415Q09FC8 603 aa9.61□□□□□ -0.87
PTPN7-218ENST00000496197 FAM231DQ6ZW35 169 aa9.61□□□□□ -0.87
PTPN7-218ENST00000496197 OR2D3Q8NGH3 330 aa9.61□□□□□ -0.87
PTPN7-218ENST00000496197 DAZAP1Q96EP5 407 aaKnown RBP9.61□□□□□ -0.87
PTPN7-218ENST00000496197 C9orf85Q96MD7 179 aa9.61□□□□□ -0.87
PTPN7-218ENST00000496197 STAB2Q8WWQ8 2551 aa9.61□□□□□ -0.87
PTPN7-218ENST00000496197 NANOS2P60321 138 aaKnown RBP9.6□□□□□ -0.87
PTPN7-218ENST00000496197 ERVFC1-1P60608 527 aa9.6□□□□□ -0.87
PTPN7-218ENST00000496197 DNLZQ5SXM8 178 aa9.6□□□□□ -0.87
PTPN7-218ENST00000496197 C10orf91Q5T1B1 145 aa9.6□□□□□ -0.87
PTPN7-218ENST00000496197 Q6ZTI0 123 aa9.6□□□□□ -0.87
PTPN7-218ENST00000496197 RPP21Q9H633 154 aaKnown RBP9.6□□□□□ -0.87
PTPN7-218ENST00000496197 BIN3Q9NQY0 253 aa9.6□□□□□ -0.87
PTPN7-218ENST00000496197 MRPL16Q9NX20 251 aaKnown RBP9.6□□□□□ -0.87
PTPN7-218ENST00000496197 TIMM8BQ9Y5J9 83 aaPredicted RBP9.6□□□□□ -0.87
PTPN7-218ENST00000496197 SNURFLB1AK76 121 aa9.59□□□□□ -0.87
PTPN7-218ENST00000496197 SPINK4O60575 86 aa9.59□□□□□ -0.87
PTPN7-218ENST00000496197 ARMS2P0C7Q2 107 aa9.59□□□□□ -0.87
PTPN7-218ENST00000496197 ASIPP42127 132 aa9.59□□□□□ -0.87
PTPN7-218ENST00000496197 DAZ2Q13117 558 aaKnown RBP9.59□□□□□ -0.87
PTPN7-218ENST00000496197 C12orf74Q32Q52 190 aa9.59□□□□□ -0.87
PTPN7-218ENST00000496197 SFRP2Q96HF1 295 aa9.59□□□□□ -0.87
PTPN7-218ENST00000496197 SEC11CQ9BY50 192 aa9.59□□□□□ -0.87
PTPN7-218ENST00000496197 V9GYV3 84 aa9.59□□□□□ -0.87
PTPN7-218ENST00000496197 GATCO43716 136 aaKnown RBP9.59□□□□□ -0.87
PTPN7-218ENST00000496197 LINC00612Q8N6U2 182 aa9.59□□□□□ -0.87
PTPN7-218ENST00000496197 OSTCQ9NRP0 149 aa9.59□□□□□ -0.87
PTPN7-218ENST00000496197 IL36BQ9NZH7 164 aa9.59□□□□□ -0.87
PTPN7-218ENST00000496197 MUC21A0A0G2JKD1 596 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 MUC21A0A140T8X8 626 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 GAGE12BA1L429 117 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 LYRM9A8MSI8 78 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 GAGE7O76087 117 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 CXCL1P09341 107 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 IGLC6P0CF74 106 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 GAGE12FP0CL80 117 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 GAGE12GP0CL81 117 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 GAGE12IP0CL82 117 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 SPART-AS1P0CW21 52 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 DEFB130BP0DP73 79 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 DEFB130AP0DP74 79 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 S100A4P26447 101 aaKnown RBP9.58□□□□□ -0.88
PTPN7-218ENST00000496197 GTSF1Q8WW33 167 aa9.58□□□□□ -0.88
PTPN7-218ENST00000496197 SCRT2Q9NQ03 307 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms