RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CIDEAO60543 219 aa8.56□□□□□ -1.04
EXOSC3-207ENST00000490516 VAMP1P23763 118 aa8.56□□□□□ -1.04
EXOSC3-207ENST00000490516 VBP1P61758 197 aa8.56□□□□□ -1.04
EXOSC3-207ENST00000490516 Q0VG73 95 aa8.56□□□□□ -1.04
EXOSC3-207ENST00000490516 ENHOQ6UWT2 76 aa8.56□□□□□ -1.04
EXOSC3-207ENST00000490516 OR10G9Q8NGN4 311 aa8.56□□□□□ -1.04
EXOSC3-207ENST00000490516 OR1L4Q8NGR5 311 aa8.56□□□□□ -1.04
EXOSC3-207ENST00000490516 RNF185Q96GF1 192 aa8.56□□□□□ -1.04
EXOSC3-207ENST00000490516 SMIM8Q96KF7 97 aa8.56□□□□□ -1.04
EXOSC3-207ENST00000490516 TMEM14CQ9P0S9 112 aa8.56□□□□□ -1.04
EXOSC3-207ENST00000490516 A0A087WX48 190 aa8.55□□□□□ -1.04
EXOSC3-207ENST00000490516 CAMLGP49069 296 aa8.55□□□□□ -1.04
EXOSC3-207ENST00000490516 SPINK6Q6UWN8 80 aa8.55□□□□□ -1.04
EXOSC3-207ENST00000490516 SPACA4Q8TDM5 124 aa8.55□□□□□ -1.04
EXOSC3-207ENST00000490516 SMIM4Q8WVI0 70 aa8.55□□□□□ -1.04
EXOSC3-207ENST00000490516 GTSF1Q8WW33 167 aa8.55□□□□□ -1.04
EXOSC3-207ENST00000490516 SAMD10Q9BYL1 202 aa8.55□□□□□ -1.04
EXOSC3-207ENST00000490516 GPN1Q9HCN4 374 aaPredicted RBP8.55□□□□□ -1.04
EXOSC3-207ENST00000490516 MCUBQ9NWR8 336 aa8.55□□□□□ -1.04
EXOSC3-207ENST00000490516 PLAC8Q9NZF1 115 aa8.55□□□□□ -1.04
EXOSC3-207ENST00000490516 ELOBQ15370 118 aa8.54□□□□□ -1.04
EXOSC3-207ENST00000490516 TMEM128Q5BJH2 165 aa8.54□□□□□ -1.04
EXOSC3-207ENST00000490516 NRARPQ7Z6K4 114 aa8.54□□□□□ -1.04
EXOSC3-207ENST00000490516 C12orf45Q8N5I9 185 aaPredicted RBP8.54□□□□□ -1.04
EXOSC3-207ENST00000490516 PFDN5Q99471 154 aa8.54□□□□□ -1.04
EXOSC3-207ENST00000490516 ANKRD20A5PA0PJZ0 165 aa8.53□□□□□ -1.04
EXOSC3-207ENST00000490516 MRPS10P82664 201 aaKnown RBP8.53□□□□□ -1.04
EXOSC3-207ENST00000490516 ATP5SQ99766 215 aa8.53□□□□□ -1.04
EXOSC3-207ENST00000490516 C20orf85Q9H1P6 137 aa8.53□□□□□ -1.04
EXOSC3-207ENST00000490516 SLC39A9Q9NUM3 307 aa8.53□□□□□ -1.04
EXOSC3-207ENST00000490516 PGPA6NDG6 321 aa8.52□□□□□ -1.05
EXOSC3-207ENST00000490516 OR2T35Q8NGX2 323 aa8.52□□□□□ -1.05
EXOSC3-207ENST00000490516 MIXL1Q9H2W2 232 aa8.52□□□□□ -1.05
EXOSC3-207ENST00000490516 SDF2L1Q9HCN8 221 aa8.52□□□□□ -1.05
EXOSC3-207ENST00000490516 PGPEP1LA6NFU8 196 aa8.51□□□□□ -1.05
EXOSC3-207ENST00000490516 DIRC3C9JPN6 131 aa8.51□□□□□ -1.05
EXOSC3-207ENST00000490516 CTDSPLO15194 276 aa8.51□□□□□ -1.05
EXOSC3-207ENST00000490516 SFT2D2O95562 160 aa8.51□□□□□ -1.05
EXOSC3-207ENST00000490516 CRPP02741 224 aa8.51□□□□□ -1.05
EXOSC3-207ENST00000490516 ZNF506Q5JVG8 444 aa8.51□□□□□ -1.05
EXOSC3-207ENST00000490516 KCNIP4Q6PIL6 250 aa8.51□□□□□ -1.05
EXOSC3-207ENST00000490516 C15orf54Q8N8G6 183 aa8.51□□□□□ -1.05
EXOSC3-207ENST00000490516 CHCHD7Q9BUK0 85 aa8.51□□□□□ -1.05
EXOSC3-207ENST00000490516 GGACTQ9BVM4 153 aa8.51□□□□□ -1.05
EXOSC3-207ENST00000490516 IGHV3-64A0A075B6Q5 118 aa8.5□□□□□ -1.05
EXOSC3-207ENST00000490516 RBAKDNA6NC62 111 aa8.5□□□□□ -1.05
EXOSC3-207ENST00000490516 NBEAP1P0C6P0 100 aa8.5□□□□□ -1.05
EXOSC3-207ENST00000490516 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.05
EXOSC3-207ENST00000490516 PPP1R1AQ13522 171 aa8.5□□□□□ -1.05
EXOSC3-207ENST00000490516 C14orf178Q8N769 122 aaPredicted RBP8.5□□□□□ -1.05
EXOSC3-207ENST00000490516 ASB13Q8WXK3 278 aa8.5□□□□□ -1.05
EXOSC3-207ENST00000490516 AP3S1Q92572 193 aa8.5□□□□□ -1.05
EXOSC3-207ENST00000490516 SLC25A2Q9BXI2 301 aa8.5□□□□□ -1.05
EXOSC3-207ENST00000490516 VAX2Q9UIW0 290 aa8.5□□□□□ -1.05
EXOSC3-207ENST00000490516 TRAV21A0A0B4J279 112 aa8.49□□□□□ -1.05
EXOSC3-207ENST00000490516 MUC21A0A0G2JKD1 596 aa8.49□□□□□ -1.05
EXOSC3-207ENST00000490516 H7C1H1 209 aa8.49□□□□□ -1.05
EXOSC3-207ENST00000490516 TAAR5O14804 337 aa8.49□□□□□ -1.05
EXOSC3-207ENST00000490516 TSC22D2O75157 780 aa8.49□□□□□ -1.05
EXOSC3-207ENST00000490516 SCGB1D2O95969 90 aa8.49□□□□□ -1.05
EXOSC3-207ENST00000490516 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
EXOSC3-207ENST00000490516 LYPD6BQ8NI32 183 aa8.49□□□□□ -1.05
EXOSC3-207ENST00000490516 PHYHIPLQ96FC7 376 aa8.49□□□□□ -1.05
EXOSC3-207ENST00000490516 LENEPQ9Y5L5 61 aa8.49□□□□□ -1.05
EXOSC3-207ENST00000490516 F6UZH7 168 aa8.48□□□□□ -1.05
EXOSC3-207ENST00000490516 CSN1S1P47710 185 aa8.48□□□□□ -1.05
EXOSC3-207ENST00000490516 GCSAMLQ5JQS6 135 aa8.48□□□□□ -1.05
EXOSC3-207ENST00000490516 DYNC2LI1Q8TCX1 351 aa8.48□□□□□ -1.05
EXOSC3-207ENST00000490516 KCNS1Q96KK3 526 aa8.48□□□□□ -1.05
EXOSC3-207ENST00000490516 FAM167A-AS1Q96KT0 104 aa8.48□□□□□ -1.05
EXOSC3-207ENST00000490516 LINC00479Q96M42 142 aa8.48□□□□□ -1.05
EXOSC3-207ENST00000490516 FUNDC2Q9BWH2 189 aa8.48□□□□□ -1.05
EXOSC3-207ENST00000490516 PARLQ9H300 379 aa8.48□□□□□ -1.05
EXOSC3-207ENST00000490516 TMEM262E9PQX1 116 aa8.47□□□□□ -1.05
EXOSC3-207ENST00000490516 RGS5O15539 181 aa8.47□□□□□ -1.05
EXOSC3-207ENST00000490516 ANGP03950 147 aaKnown RBP8.47□□□□□ -1.05
EXOSC3-207ENST00000490516 SLPIP03973 132 aa8.47□□□□□ -1.05
EXOSC3-207ENST00000490516 RPL29P47914 159 aaKnown RBP8.47□□□□□ -1.05
EXOSC3-207ENST00000490516 FGF8P55075 233 aaPredicted RBP8.47□□□□□ -1.05
EXOSC3-207ENST00000490516 IL18Q14116 193 aa8.47□□□□□ -1.05
EXOSC3-207ENST00000490516 KRTAP26-1Q6PEX3 210 aa8.47□□□□□ -1.05
EXOSC3-207ENST00000490516 C9orf85Q96MD7 179 aa8.47□□□□□ -1.05
EXOSC3-207ENST00000490516 WDR83OSQ9Y284 106 aa8.47□□□□□ -1.05
EXOSC3-207ENST00000490516 hDV102S1A0JD36 115 aa8.46□□□□□ -1.06
EXOSC3-207ENST00000490516 TAS2R30P59541 319 aa8.46□□□□□ -1.06
EXOSC3-207ENST00000490516 MPV17L2Q567V2 206 aa8.46□□□□□ -1.06
EXOSC3-207ENST00000490516 MIR17HGQ75NE6 70 aa8.46□□□□□ -1.06
EXOSC3-207ENST00000490516 CLRN3Q8NCR9 226 aa8.46□□□□□ -1.06
EXOSC3-207ENST00000490516 FXYD5Q96DB9 178 aa8.46□□□□□ -1.06
EXOSC3-207ENST00000490516 C7orf66A4D0T2 115 aa8.45□□□□□ -1.06
EXOSC3-207ENST00000490516 CTDSP2O14595 271 aa8.45□□□□□ -1.06
EXOSC3-207ENST00000490516 RANP62826 216 aaKnown RBP8.45□□□□□ -1.06
EXOSC3-207ENST00000490516 PRR4Q16378 134 aa8.45□□□□□ -1.06
EXOSC3-207ENST00000490516 MIAQ16674 131 aa8.45□□□□□ -1.06
EXOSC3-207ENST00000490516 MAJINQ3KP22 176 aa8.45□□□□□ -1.06
EXOSC3-207ENST00000490516 ZFP2Q6ZN57 461 aa8.45□□□□□ -1.06
EXOSC3-207ENST00000490516 OR2G3Q8NGZ4 309 aa8.45□□□□□ -1.06
EXOSC3-207ENST00000490516 TVP23CQ96ET8 276 aa8.45□□□□□ -1.06
EXOSC3-207ENST00000490516 Q9H521 79 aa8.45□□□□□ -1.06
EXOSC3-207ENST00000490516 JPT2Q9H910 190 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms