RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 WRBO00258 174 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 TAAR5O14804 337 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 GNRH2O43555 120 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 SYNGR2O43760 224 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 CIDEAO60543 219 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 RAB3DO95716 219 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 HLA-DQA1P01909 254 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 APOA1P02647 267 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 RPP30P78346 268 aaKnown RBP5.06□□□□□ -1.6
XRN1-212ENST00000486211 RAB31Q13636 194 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 TMEM78Q5T7P6 136 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 FAAP20Q6NZ36 180 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 KRTAP26-1Q6PEX3 210 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 EXOC3-AS1Q8N2X6 119 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 CHCHD7Q9BUK0 85 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 VCXQ9H320 206 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 MTFP1Q9UDX5 166 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 PRELID1Q9Y255 219 aa5.06□□□□□ -1.6
XRN1-212ENST00000486211 IGHV3-64A0A075B6Q5 118 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 SMIM31A0A1B0GVY4 71 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 FAM231BA6NCW3 169 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 GAGE12JA6NER3 117 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 COX7A2P2O60397 106 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 MED6O75586 246 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 MGST1P10620 155 aaKnown RBP5.05□□□□□ -1.6
XRN1-212ENST00000486211 INPP1P49441 399 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 ZNF138P52744 262 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 GAGE1Q13065 139 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 GAGE4Q13068 117 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 GAGE5Q13069 117 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 ELOBQ15370 118 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 C10orf113Q5VZT2 155 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 MZT2AQ6P582 158 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 FAM159AQ6UWV7 190 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 TMEM229BQ8NBD8 167 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 RAB2BQ8WUD1 216 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 PSORS1C2Q9UIG4 136 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 BLOC1S6Q9UL45 172 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 KCNIP3Q9Y2W7 256 aa5.05□□□□□ -1.6
XRN1-212ENST00000486211 STRAPQ9Y3F4 350 aaKnown RBP5.05□□□□□ -1.6
XRN1-212ENST00000486211 TRAV26-2A0A0B4J265 109 aa5.04□□□□□ -1.6
XRN1-212ENST00000486211 FNDC10F2Z333 226 aa5.04□□□□□ -1.6
XRN1-212ENST00000486211 AGPAT2O15120 278 aa5.04□□□□□ -1.6
XRN1-212ENST00000486211 HIST1H1EP10412 219 aaKnown RBP5.04□□□□□ -1.6
XRN1-212ENST00000486211 SLC25A6P12236 298 aa5.04□□□□□ -1.6
XRN1-212ENST00000486211 RRAS2P62070 204 aaPredicted RBP5.04□□□□□ -1.6
XRN1-212ENST00000486211 BLOC1S1P78537 153 aa5.04□□□□□ -1.6
XRN1-212ENST00000486211 MUC17Q685J3 4493 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 A0A087WX48 190 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 GOSR2O14653 212 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 CTDSPLO15194 276 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 TYMSP04818 313 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 TAS2R19P59542 299 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 GABARAPL2P60520 117 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 PDE6HQ13956 83 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 ZNF876PQ49A33 203 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 ZNF664Q8N3J9 261 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 PRR26Q8N8Z3 221 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 SAMD10Q9BYL1 202 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 C20orf85Q9H1P6 137 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 NPVFQ9HCQ7 196 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 COMMD3Q9UBI1 195 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 NAGKQ9UJ70 344 aa5.03□□□□□ -1.6
XRN1-212ENST00000486211 DUXBA0A1W2PPF3 345 aa5.02□□□□□ -1.61
XRN1-212ENST00000486211 PGPA6NDG6 321 aa5.02□□□□□ -1.61
XRN1-212ENST00000486211 HPGDSO60760 199 aa5.02□□□□□ -1.61
XRN1-212ENST00000486211 SRPXP78539 464 aa5.02□□□□□ -1.61
XRN1-212ENST00000486211 LYPD6BQ8NI32 183 aa5.02□□□□□ -1.61
XRN1-212ENST00000486211 RAB24Q969Q5 203 aa5.02□□□□□ -1.61
XRN1-212ENST00000486211 LINC00479Q96M42 142 aa5.02□□□□□ -1.61
XRN1-212ENST00000486211 MGST2Q99735 147 aa5.02□□□□□ -1.61
XRN1-212ENST00000486211 SOSTQ9BQB4 213 aa5.02□□□□□ -1.61
XRN1-212ENST00000486211 TMEM14CQ9P0S9 112 aa5.02□□□□□ -1.61
XRN1-212ENST00000486211 CRPP02741 224 aa5.01□□□□□ -1.61
XRN1-212ENST00000486211 TCRBP04435 133 aa5.01□□□□□ -1.61
XRN1-212ENST00000486211 HOXB5P09067 269 aa5.01□□□□□ -1.61
XRN1-212ENST00000486211 PYYP10082 97 aa5.01□□□□□ -1.61
XRN1-212ENST00000486211 MALP21145 153 aa5.01□□□□□ -1.61
XRN1-212ENST00000486211 CAV2P51636 162 aa5.01□□□□□ -1.61
XRN1-212ENST00000486211 MAJINQ3KP22 176 aa5.01□□□□□ -1.61
XRN1-212ENST00000486211 IZUMO2Q6UXV1 221 aa5.01□□□□□ -1.61
XRN1-212ENST00000486211 Q6ZRP5 223 aa5.01□□□□□ -1.61
XRN1-212ENST00000486211 C15orf54Q8N8G6 183 aa5.01□□□□□ -1.61
XRN1-212ENST00000486211 CNBD2Q96M20 576 aa5.01□□□□□ -1.61
XRN1-212ENST00000486211 CCDC59Q9P031 241 aaKnown RBP5.01□□□□□ -1.61
XRN1-212ENST00000486211 TIMM9Q9Y5J7 89 aa5.01□□□□□ -1.61
XRN1-212ENST00000486211 hDV102S1A0JD36 115 aa5□□□□□ -1.61
XRN1-212ENST00000486211 PGPEP1LA6NFU8 196 aa5□□□□□ -1.61
XRN1-212ENST00000486211 CACNG7P62955 275 aa5□□□□□ -1.61
XRN1-212ENST00000486211 COX6A2Q02221 97 aa5□□□□□ -1.61
XRN1-212ENST00000486211 ARL16Q0P5N6 197 aa5□□□□□ -1.61
XRN1-212ENST00000486211 FOXI1Q12951 378 aa5□□□□□ -1.61
XRN1-212ENST00000486211 MIAQ16674 131 aa5□□□□□ -1.61
XRN1-212ENST00000486211 ZNF506Q5JVG8 444 aa5□□□□□ -1.61
XRN1-212ENST00000486211 TMEM14EPQ6UXP3 125 aa5□□□□□ -1.61
XRN1-212ENST00000486211 C14orf178Q8N769 122 aaPredicted RBP5□□□□□ -1.61
XRN1-212ENST00000486211 STPG4Q8N801 248 aa5□□□□□ -1.61
XRN1-212ENST00000486211 TMEM75Q8N9X5 138 aa5□□□□□ -1.61
XRN1-212ENST00000486211 C9orf85Q96MD7 179 aa5□□□□□ -1.61
XRN1-212ENST00000486211 PARLQ9H300 379 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms