RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 FAM24AA6NFZ4 105 aa10.56□□□□□ -0.72
DDX56-210ENST00000479440 GGTLC3B5MD39 225 aa10.56□□□□□ -0.72
DDX56-210ENST00000479440 S100A5P33763 92 aa10.56□□□□□ -0.72
DDX56-210ENST00000479440 RPL37AP61513 92 aaKnown RBP10.56□□□□□ -0.72
DDX56-210ENST00000479440 GCSAMLQ5JQS6 135 aa10.56□□□□□ -0.72
DDX56-210ENST00000479440 MIR17HGQ75NE6 70 aa10.56□□□□□ -0.72
DDX56-210ENST00000479440 Q8N976 141 aa10.56□□□□□ -0.72
DDX56-210ENST00000479440 BAALCQ8WXS3 180 aa10.56□□□□□ -0.72
DDX56-210ENST00000479440 FAM167A-AS1Q96KT0 104 aa10.56□□□□□ -0.72
DDX56-210ENST00000479440 PAXXQ9BUH6 204 aa10.56□□□□□ -0.72
DDX56-210ENST00000479440 NPCDR1Q9BY65 106 aa10.56□□□□□ -0.72
DDX56-210ENST00000479440 SDF2L1Q9HCN8 221 aa10.56□□□□□ -0.72
DDX56-210ENST00000479440 H3BMQ9 156 aa10.55□□□□□ -0.72
DDX56-210ENST00000479440 CCSO14618 274 aa10.55□□□□□ -0.72
DDX56-210ENST00000479440 TYMSP04818 313 aa10.55□□□□□ -0.72
DDX56-210ENST00000479440 OR10J4P0C629 311 aa10.55□□□□□ -0.72
DDX56-210ENST00000479440 ATP6V1FQ16864 119 aa10.55□□□□□ -0.72
DDX56-210ENST00000479440 TRIQKQ629K1 86 aa10.55□□□□□ -0.72
DDX56-210ENST00000479440 LYRM2Q9NU23 88 aaPredicted RBP10.55□□□□□ -0.72
DDX56-210ENST00000479440 PKHD1L1Q86WI1 4243 aa10.54□□□□□ -0.72
DDX56-210ENST00000479440 TRAV21A0A0B4J279 112 aa10.54□□□□□ -0.72
DDX56-210ENST00000479440 FAM25EA8MYX2 175 aa10.54□□□□□ -0.72
DDX56-210ENST00000479440 GNRH2O43555 120 aa10.54□□□□□ -0.72
DDX56-210ENST00000479440 IGLV2-11P01706 119 aa10.54□□□□□ -0.72
DDX56-210ENST00000479440 TMED6Q8WW62 240 aa10.54□□□□□ -0.72
DDX56-210ENST00000479440 FXYD5Q96DB9 178 aa10.54□□□□□ -0.72
DDX56-210ENST00000479440 C11orf1Q9H5F2 150 aa10.54□□□□□ -0.72
DDX56-210ENST00000479440 KCNIP2Q9NS61 270 aa10.54□□□□□ -0.72
DDX56-210ENST00000479440 OR7C2O60412 319 aa10.53□□□□□ -0.72
DDX56-210ENST00000479440 MGST1P10620 155 aaKnown RBP10.53□□□□□ -0.72
DDX56-210ENST00000479440 S100A10P60903 97 aa10.53□□□□□ -0.72
DDX56-210ENST00000479440 Q8N3U1 123 aa10.53□□□□□ -0.72
DDX56-210ENST00000479440 KCNS1Q96KK3 526 aa10.53□□□□□ -0.72
DDX56-210ENST00000479440 IGSF23A1L1A6 192 aa10.52□□□□□ -0.73
DDX56-210ENST00000479440 CENPXA8MT69 81 aa10.52□□□□□ -0.73
DDX56-210ENST00000479440 DIRC3C9JPN6 131 aa10.52□□□□□ -0.73
DDX56-210ENST00000479440 SEC11BP0C7V7 166 aa10.52□□□□□ -0.73
DDX56-210ENST00000479440 RANP62826 216 aaKnown RBP10.52□□□□□ -0.73
DDX56-210ENST00000479440 UBE2L3P68036 154 aaKnown RBP10.52□□□□□ -0.73
DDX56-210ENST00000479440 CNPY1Q3B7I2 92 aa10.52□□□□□ -0.73
DDX56-210ENST00000479440 ZNF876PQ49A33 203 aa10.52□□□□□ -0.73
DDX56-210ENST00000479440 SPANXN2Q5MJ10 180 aa10.52□□□□□ -0.73
DDX56-210ENST00000479440 CFAP126Q5VTH2 177 aa10.52□□□□□ -0.73
DDX56-210ENST00000479440 DAZ4Q86SG3 579 aaKnown RBP10.52□□□□□ -0.73
DDX56-210ENST00000479440 TMEM252Q8N6L7 170 aa10.52□□□□□ -0.73
DDX56-210ENST00000479440 DAZ3Q9NR90 486 aaKnown RBP10.52□□□□□ -0.73
DDX56-210ENST00000479440 TRAV8-1A0A0A6YYK1 113 aa10.51□□□□□ -0.73
DDX56-210ENST00000479440 IGHV3-73A0A0B4J1V6 119 aa10.51□□□□□ -0.73
DDX56-210ENST00000479440 ASB13Q8WXK3 278 aa10.51□□□□□ -0.73
DDX56-210ENST00000479440 IGKV2D-24A0A075B6R9 120 aa10.5□□□□□ -0.73
DDX56-210ENST00000479440 RNF222A6NCQ9 220 aa10.5□□□□□ -0.73
DDX56-210ENST00000479440 F6UZH7 168 aa10.5□□□□□ -0.73
DDX56-210ENST00000479440 URGCP-MRPS24S4R325 110 aa10.5□□□□□ -0.73
DDX56-210ENST00000479440 A0A087WWC5 75 aa10.49□□□□□ -0.73
DDX56-210ENST00000479440 BTCP35070 178 aa10.49□□□□□ -0.73
DDX56-210ENST00000479440 C14orf177Q52M58 125 aa10.49□□□□□ -0.73
DDX56-210ENST00000479440 CMTM2Q8TAZ6 248 aa10.49□□□□□ -0.73
DDX56-210ENST00000479440 THAP6Q8TBB0 222 aa10.49□□□□□ -0.73
DDX56-210ENST00000479440 C2orf50Q96LR7 162 aa10.49□□□□□ -0.73
DDX56-210ENST00000479440 RPH3ALQ9UNE2 315 aa10.49□□□□□ -0.73
DDX56-210ENST00000479440 FAM74A1Q5RGS3 127 aa10.48□□□□□ -0.73
DDX56-210ENST00000479440 HYLS1Q96M11 299 aa10.48□□□□□ -0.73
DDX56-210ENST00000479440 GAGE12JA6NER3 117 aa10.47□□□□□ -0.73
DDX56-210ENST00000479440 HNRNPA3P51991 378 aaKnown RBP10.47□□□□□ -0.73
DDX56-210ENST00000479440 GAGE1Q13065 139 aa10.47□□□□□ -0.73
DDX56-210ENST00000479440 GAGE4Q13068 117 aa10.47□□□□□ -0.73
DDX56-210ENST00000479440 GAGE5Q13069 117 aa10.47□□□□□ -0.73
DDX56-210ENST00000479440 RAB32Q13637 225 aa10.47□□□□□ -0.73
DDX56-210ENST00000479440 GAGE13Q4V321 117 aa10.47□□□□□ -0.73
DDX56-210ENST00000479440 KHDC3LQ587J8 217 aa10.47□□□□□ -0.73
DDX56-210ENST00000479440 DPPA3Q6W0C5 159 aa10.47□□□□□ -0.73
DDX56-210ENST00000479440 DAZAP1Q96EP5 407 aaKnown RBP10.47□□□□□ -0.73
DDX56-210ENST00000479440 TREM1Q9NP99 234 aa10.47□□□□□ -0.73
DDX56-210ENST00000479440 RNF213Q63HN8 5207 aa10.46□□□□□ -0.73
DDX56-210ENST00000479440 C17orf112F2Z3M2 114 aa10.46□□□□□ -0.73
DDX56-210ENST00000479440 MT1HL1P0DM35 61 aa10.46□□□□□ -0.73
DDX56-210ENST00000479440 LINC00694P0DN24 101 aa10.46□□□□□ -0.73
DDX56-210ENST00000479440 TAS2R45P59539 299 aa10.46□□□□□ -0.73
DDX56-210ENST00000479440 CYB561D1Q8N8Q1 229 aa10.46□□□□□ -0.73
DDX56-210ENST00000479440 OTORQ9NRC9 128 aa10.46□□□□□ -0.73
DDX56-210ENST00000479440 ZNF506Q5JVG8 444 aa10.45□□□□□ -0.74
DDX56-210ENST00000479440 GOLT1AQ6ZVE7 132 aa10.45□□□□□ -0.74
DDX56-210ENST00000479440 OR10G9Q8NGN4 311 aa10.45□□□□□ -0.74
DDX56-210ENST00000479440 OR5C1Q8NGR4 320 aa10.45□□□□□ -0.74
DDX56-210ENST00000479440 PTH2Q96A98 100 aa10.45□□□□□ -0.74
DDX56-210ENST00000479440 NDFIP1Q9BT67 221 aa10.45□□□□□ -0.74
DDX56-210ENST00000479440 NMES1Q9C002 83 aa10.45□□□□□ -0.74
DDX56-210ENST00000479440 FGF8P55075 233 aaPredicted RBP10.44□□□□□ -0.74
DDX56-210ENST00000479440 ELOBQ15370 118 aa10.44□□□□□ -0.74
DDX56-210ENST00000479440 Q6ZRU5 148 aa10.44□□□□□ -0.74
DDX56-210ENST00000479440 ARL6IP6Q8N6S5 226 aa10.44□□□□□ -0.74
DDX56-210ENST00000479440 C9orf85Q96MD7 179 aa10.44□□□□□ -0.74
DDX56-210ENST00000479440 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
DDX56-210ENST00000479440 PGPA6NDG6 321 aa10.43□□□□□ -0.74
DDX56-210ENST00000479440 KCNIP4Q6PIL6 250 aa10.43□□□□□ -0.74
DDX56-210ENST00000479440 ZFP2Q6ZN57 461 aa10.43□□□□□ -0.74
DDX56-210ENST00000479440 UBE2WQ96B02 151 aa10.43□□□□□ -0.74
DDX56-210ENST00000479440 CHCHD7Q9BUK0 85 aa10.43□□□□□ -0.74
DDX56-210ENST00000479440 WDR61Q9GZS3 305 aaKnown RBP10.43□□□□□ -0.74
DDX56-210ENST00000479440 PARLQ9H300 379 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms