RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 CNBD2Q96M20 576 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 OR51M1Q9H341 326 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 NPVFQ9HCQ7 196 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 PLAC8Q9NZF1 115 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 VAX2Q9UIW0 290 aa4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 STRAPQ9Y3F4 350 aaKnown RBP4.57□□□□□ -1.68
SPTLC1-205ENST00000477888 IGKV2-40A0A087WW87 121 aaPredicted RBP4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 A0A087WWC5 75 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 GOSR2O14653 212 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 GNRH2O43555 120 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 COX7A2P2O60397 106 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 CIDEAO60543 219 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 IGKV2D-40P01614 121 aaPredicted RBP4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 CHTF8P0CG12 524 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 Q0VG73 95 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 RAB31Q13636 194 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 ZNF266Q14584 549 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 C10orf113Q5VZT2 155 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 Q6AWC8 147 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 FAM159AQ6UWV7 190 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 EXOC3-AS1Q8N2X6 119 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 CYB561D1Q8N8Q1 229 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 SPACA4Q8TDM5 124 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 C7orf33Q8WU49 177 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 RAB2BQ8WUD1 216 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 PRELID1Q9Y255 219 aa4.56□□□□□ -1.68
SPTLC1-205ENST00000477888 IGHV3-73A0A0B4J1V6 119 aa4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 DUXBA0A1W2PPF3 345 aa4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 FNDC10F2Z333 226 aa4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 AGPAT2O15120 278 aa4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 HPGDSO60760 199 aa4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 HIST1H1EP10412 219 aaKnown RBP4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 INPP1P49441 399 aa4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 ZNF138P52744 262 aa4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 LINC00310P59036 64 aa4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 RRAS2P62070 204 aaPredicted RBP4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 SRPXP78539 464 aa4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 ENHOQ6UWT2 76 aa4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 Q8TAT8 98 aa4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 Q9UF83 564 aa4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 URGCP-MRPS24S4R325 110 aa4.55□□□□□ -1.68
SPTLC1-205ENST00000477888 SCO2A0A1W2PP80 73 aa4.54□□□□□ -1.68
SPTLC1-205ENST00000477888 GAGE12JA6NER3 117 aa4.54□□□□□ -1.68
SPTLC1-205ENST00000477888 DISC1C4P0D8 188 aa4.54□□□□□ -1.68
SPTLC1-205ENST00000477888 MGST1P10620 155 aaKnown RBP4.54□□□□□ -1.68
SPTLC1-205ENST00000477888 CNBPP62633 177 aaKnown RBP4.54□□□□□ -1.68
SPTLC1-205ENST00000477888 GAGE1Q13065 139 aa4.54□□□□□ -1.68
SPTLC1-205ENST00000477888 GAGE4Q13068 117 aa4.54□□□□□ -1.68
SPTLC1-205ENST00000477888 GAGE5Q13069 117 aa4.54□□□□□ -1.68
SPTLC1-205ENST00000477888 PDE6HQ13956 83 aa4.54□□□□□ -1.68
SPTLC1-205ENST00000477888 ELOBQ15370 118 aa4.54□□□□□ -1.68
SPTLC1-205ENST00000477888 GTSF1Q8WW33 167 aa4.54□□□□□ -1.68
SPTLC1-205ENST00000477888 CHCHD7Q9BUK0 85 aa4.54□□□□□ -1.68
SPTLC1-205ENST00000477888 PIGBOS1A0A0B4J2F0 54 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 C5orf51A6NDU8 294 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 VCYO14598 125 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 TAAR5O14804 337 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 SLPIP03973 132 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 ANXA3P12429 323 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 ZNF876PQ49A33 203 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 TMEM14EPQ6UXP3 125 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 PQLC2Q6ZP29 291 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 MGST2Q99735 147 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 PRRT1Q99946 306 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 PSENENQ9NZ42 101 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 TMEM14CQ9P0S9 112 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 TIMM9Q9Y5J7 89 aa4.53□□□□□ -1.68
SPTLC1-205ENST00000477888 A0A087WX48 190 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 H7C1H1 209 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 CTDSPLO15194 276 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 HLA-DQA1P01909 254 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 TYMSP04818 313 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 LSM3P62310 102 aaKnown RBP4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 SSBP1Q04837 148 aaKnown RBP4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 KRTAP26-1Q6PEX3 210 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 IZUMO2Q6UXV1 221 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 Q6ZRG5 221 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 SMIM8Q96KF7 97 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 SCGB3A2Q96PL1 93 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 SOSTQ9BQB4 213 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 SAMD10Q9BYL1 202 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 AAMDCQ9H7C9 122 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 CCDC59Q9P031 241 aaKnown RBP4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 NAGKQ9UJ70 344 aa4.52□□□□□ -1.69
SPTLC1-205ENST00000477888 IGHV3-64A0A075B6Q5 118 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 MUC21A0A0G2JKD1 596 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 FAM231BA6NCW3 169 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 FAM25AB3EWG3 89 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 FAM25CB3EWG5 89 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 FAM25GB3EWG6 89 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 METTL15P1P0C7V9 234 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 AKAIN1P0CW23 69 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 PYYP10082 97 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 ARL16Q0P5N6 197 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 NEDD8Q15843 81 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 OCC1Q8TAD7 63 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 C15orf40Q8WUR7 153 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 LINC00479Q96M42 142 aa4.51□□□□□ -1.69
SPTLC1-205ENST00000477888 EXTL2Q9UBQ6 330 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms