RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 NAGKQ9UJ70 344 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 COX11Q9Y6N1 276 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 DNAH8Q96JB1 4490 aa8.36□□□□□ -1.07
SKA3-206ENST00000475251 C5orf51A6NDU8 294 aa8.35□□□□□ -1.07
SKA3-206ENST00000475251 FBLL1A6NHQ2 334 aaKnown RBP8.35□□□□□ -1.07
SKA3-206ENST00000475251 CCSO14618 274 aa8.35□□□□□ -1.07
SKA3-206ENST00000475251 RHOHQ15669 191 aa8.35□□□□□ -1.07
SKA3-206ENST00000475251 SCXQ7RTU7 201 aa8.35□□□□□ -1.07
SKA3-206ENST00000475251 TMEM252Q8N6L7 170 aa8.35□□□□□ -1.07
SKA3-206ENST00000475251 TMED6Q8WW62 240 aa8.35□□□□□ -1.07
SKA3-206ENST00000475251 FAM167A-AS1Q96KT0 104 aa8.35□□□□□ -1.07
SKA3-206ENST00000475251 UBR4Q5T4S7 5183 aa8.35□□□□□ -1.07
SKA3-206ENST00000475251 IGHV3-16A0A0C4DH30 117 aa8.34□□□□□ -1.07
SKA3-206ENST00000475251 TRBV6-4A0A1B0GX49 114 aa8.34□□□□□ -1.07
SKA3-206ENST00000475251 OR10J4P0C629 311 aa8.34□□□□□ -1.07
SKA3-206ENST00000475251 S100A10P60903 97 aa8.34□□□□□ -1.07
SKA3-206ENST00000475251 ACOT6Q3I5F7 207 aaPredicted RBP8.34□□□□□ -1.07
SKA3-206ENST00000475251 GCSAMLQ5JQS6 135 aa8.34□□□□□ -1.07
SKA3-206ENST00000475251 MIR17HGQ75NE6 70 aa8.34□□□□□ -1.07
SKA3-206ENST00000475251 FXYD5Q96DB9 178 aa8.34□□□□□ -1.07
SKA3-206ENST00000475251 PHYHIPLQ96FC7 376 aa8.34□□□□□ -1.07
SKA3-206ENST00000475251 KCNS1Q96KK3 526 aa8.34□□□□□ -1.07
SKA3-206ENST00000475251 C11orf1Q9H5F2 150 aa8.34□□□□□ -1.07
SKA3-206ENST00000475251 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.33□□□□□ -1.08
SKA3-206ENST00000475251 TRAV21A0A0B4J279 112 aa8.33□□□□□ -1.08
SKA3-206ENST00000475251 OR7C2O60412 319 aa8.33□□□□□ -1.08
SKA3-206ENST00000475251 RANP62826 216 aaKnown RBP8.33□□□□□ -1.08
SKA3-206ENST00000475251 SLC25A29Q8N8R3 303 aa8.33□□□□□ -1.08
SKA3-206ENST00000475251 C2orf50Q96LR7 162 aa8.33□□□□□ -1.08
SKA3-206ENST00000475251 GTSF1LQ9H1H1 148 aa8.33□□□□□ -1.08
SKA3-206ENST00000475251 SDF2L1Q9HCN8 221 aa8.33□□□□□ -1.08
SKA3-206ENST00000475251 IGSF23A1L1A6 192 aa8.32□□□□□ -1.08
SKA3-206ENST00000475251 DIRC3C9JPN6 131 aa8.32□□□□□ -1.08
SKA3-206ENST00000475251 BTCP35070 178 aa8.32□□□□□ -1.08
SKA3-206ENST00000475251 ATP6V0E2Q8NHE4 81 aa8.32□□□□□ -1.08
SKA3-206ENST00000475251 RMI2Q96E14 147 aa8.32□□□□□ -1.08
SKA3-206ENST00000475251 CHAC1Q9BUX1 264 aa8.32□□□□□ -1.08
SKA3-206ENST00000475251 SSBP4Q9BWG4 385 aaPredicted RBP8.32□□□□□ -1.08
SKA3-206ENST00000475251 RBFOX3A6NFN3 312 aa8.31□□□□□ -1.08
SKA3-206ENST00000475251 CCDC160A6NGH7 325 aa8.31□□□□□ -1.08
SKA3-206ENST00000475251 GGTLC3B5MD39 225 aa8.31□□□□□ -1.08
SKA3-206ENST00000475251 RS1O15537 224 aa8.31□□□□□ -1.08
SKA3-206ENST00000475251 GNRH2O43555 120 aa8.31□□□□□ -1.08
SKA3-206ENST00000475251 TYMSP04818 313 aa8.31□□□□□ -1.08
SKA3-206ENST00000475251 UBE2L3P68036 154 aaKnown RBP8.31□□□□□ -1.08
SKA3-206ENST00000475251 WFDC2Q14508 124 aa8.31□□□□□ -1.08
SKA3-206ENST00000475251 FAM74A1Q5RGS3 127 aa8.31□□□□□ -1.08
SKA3-206ENST00000475251 Q8N3U1 123 aa8.31□□□□□ -1.08
SKA3-206ENST00000475251 Q8N976 141 aa8.31□□□□□ -1.08
SKA3-206ENST00000475251 CMTM2Q8TAZ6 248 aa8.31□□□□□ -1.08
SKA3-206ENST00000475251 C17orf112F2Z3M2 114 aa8.3□□□□□ -1.08
SKA3-206ENST00000475251 LECT2O14960 151 aa8.3□□□□□ -1.08
SKA3-206ENST00000475251 SEC11BP0C7V7 166 aa8.3□□□□□ -1.08
SKA3-206ENST00000475251 MGST1P10620 155 aaKnown RBP8.3□□□□□ -1.08
SKA3-206ENST00000475251 RAB32Q13637 225 aa8.3□□□□□ -1.08
SKA3-206ENST00000475251 ZNF876PQ49A33 203 aa8.3□□□□□ -1.08
SKA3-206ENST00000475251 THAP6Q8TBB0 222 aa8.3□□□□□ -1.08
SKA3-206ENST00000475251 ASB13Q8WXK3 278 aa8.3□□□□□ -1.08
SKA3-206ENST00000475251 IGLV2-8P01709 118 aa8.29□□□□□ -1.08
SKA3-206ENST00000475251 TAS2R45P59539 299 aa8.29□□□□□ -1.08
SKA3-206ENST00000475251 KRTAP10-4P60372 401 aaPredicted RBP8.29□□□□□ -1.08
SKA3-206ENST00000475251 KHDC3LQ587J8 217 aa8.29□□□□□ -1.08
SKA3-206ENST00000475251 CFAP126Q5VTH2 177 aa8.29□□□□□ -1.08
SKA3-206ENST00000475251 OR5C1Q8NGR4 320 aa8.29□□□□□ -1.08
SKA3-206ENST00000475251 ARL6IP6Q8N6S5 226 aa8.28□□□□□ -1.08
SKA3-206ENST00000475251 CIRBP-AS1Q8TBR5 109 aa8.28□□□□□ -1.08
SKA3-206ENST00000475251 BAALCQ8WXS3 180 aa8.28□□□□□ -1.08
SKA3-206ENST00000475251 HYLS1Q96M11 299 aa8.28□□□□□ -1.08
SKA3-206ENST00000475251 NMES1Q9C002 83 aa8.28□□□□□ -1.08
SKA3-206ENST00000475251 TREM1Q9NP99 234 aa8.28□□□□□ -1.08
SKA3-206ENST00000475251 OTORQ9NRC9 128 aa8.28□□□□□ -1.08
SKA3-206ENST00000475251 URGCP-MRPS24S4R325 110 aa8.28□□□□□ -1.08
SKA3-206ENST00000475251 A0A087WWC5 75 aa8.27□□□□□ -1.09
SKA3-206ENST00000475251 TRAV8-1A0A0A6YYK1 113 aa8.27□□□□□ -1.09
SKA3-206ENST00000475251 IL7P13232 177 aa8.27□□□□□ -1.09
SKA3-206ENST00000475251 IL15RAQ13261 267 aa8.27□□□□□ -1.09
SKA3-206ENST00000475251 LINC01620Q4KN68 170 aa8.27□□□□□ -1.09
SKA3-206ENST00000475251 NDFIP1Q9BT67 221 aa8.27□□□□□ -1.09
SKA3-206ENST00000475251 WDR61Q9GZS3 305 aaKnown RBP8.27□□□□□ -1.09
SKA3-206ENST00000475251 RPH3ALQ9UNE2 315 aa8.27□□□□□ -1.09
SKA3-206ENST00000475251 LRP1Q07954 4544 aaKnown RBP8.26□□□□□ -1.09
SKA3-206ENST00000475251 TRAV6A0A075B6T7 132 aa8.26□□□□□ -1.09
SKA3-206ENST00000475251 IGHV3-73A0A0B4J1V6 119 aa8.26□□□□□ -1.09
SKA3-206ENST00000475251 RNF222A6NCQ9 220 aa8.26□□□□□ -1.09
SKA3-206ENST00000475251 F6UZH7 168 aa8.26□□□□□ -1.09
SKA3-206ENST00000475251 TCRBP04435 133 aa8.26□□□□□ -1.09
SKA3-206ENST00000475251 NHLH2Q02577 135 aa8.26□□□□□ -1.09
SKA3-206ENST00000475251 DAZ4Q86SG3 579 aaKnown RBP8.26□□□□□ -1.09
SKA3-206ENST00000475251 PTH2Q96A98 100 aa8.26□□□□□ -1.09
SKA3-206ENST00000475251 SEC22CQ9BRL7 303 aa8.26□□□□□ -1.09
SKA3-206ENST00000475251 DAZ3Q9NR90 486 aaKnown RBP8.26□□□□□ -1.09
SKA3-206ENST00000475251 PGPA6NDG6 321 aa8.25□□□□□ -1.09
SKA3-206ENST00000475251 LYRM1O43325 122 aa8.25□□□□□ -1.09
SKA3-206ENST00000475251 IGLV2-11P01706 119 aa8.25□□□□□ -1.09
SKA3-206ENST00000475251 FGF8P55075 233 aaPredicted RBP8.25□□□□□ -1.09
SKA3-206ENST00000475251 RPL37AP61513 92 aaKnown RBP8.25□□□□□ -1.09
SKA3-206ENST00000475251 C14orf177Q52M58 125 aa8.25□□□□□ -1.09
SKA3-206ENST00000475251 GOLT1AQ6ZVE7 132 aa8.25□□□□□ -1.09
SKA3-206ENST00000475251 OR10G9Q8NGN4 311 aa8.25□□□□□ -1.09
SKA3-206ENST00000475251 SDHCQ99643 169 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms