RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 CCSMST1Q4G0I0 132 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 PABPC1L2AQ5JQF8 200 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 LCN15Q6UWW0 184 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 TMEM91Q6ZNR0 172 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 C3orf62Q6ZUJ4 267 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 FAM216BQ8N7L0 139 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-205ENST00000469043 OR5D14Q8NGL3 314 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 PSMG3Q9BT73 122 aaPredicted RBP2.72□□□□□ -1.97
SCFD1-205ENST00000469043 NHP2Q9NX24 153 aaKnown RBP2.72□□□□□ -1.97
SCFD1-205ENST00000469043 SCN3BQ9NY72 215 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 ANAPC11Q9NYG5 84 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 COMMD3Q9UBI1 195 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 HLA-DRB4X5D2U9 266 aa2.72□□□□□ -1.97
SCFD1-205ENST00000469043 SEC16AO15027 2179 aa2.71□□□□□ -1.97
SCFD1-205ENST00000469043 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-205ENST00000469043 TRAV40A0A0B4J280 105 aa2.71□□□□□ -1.98
SCFD1-205ENST00000469043 BBIP1A8MTZ0 92 aa2.71□□□□□ -1.98
SCFD1-205ENST00000469043 RPL36A-HNRNPH2H7BZ11 118 aa2.71□□□□□ -1.98
SCFD1-205ENST00000469043 PRB2P02812 416 aaPredicted RBP2.71□□□□□ -1.98
SCFD1-205ENST00000469043 CLPSP04118 112 aa2.71□□□□□ -1.98
SCFD1-205ENST00000469043 TRGC1P0CF51 173 aa2.71□□□□□ -1.98
SCFD1-205ENST00000469043 RPS19BP1Q86WX3 136 aaKnown RBP2.71□□□□□ -1.98
SCFD1-205ENST00000469043 Q8N9L7 120 aa2.71□□□□□ -1.98
SCFD1-205ENST00000469043 CHCHD1Q96BP2 118 aaKnown RBP2.71□□□□□ -1.98
SCFD1-205ENST00000469043 SDF2Q99470 211 aa2.71□□□□□ -1.98
SCFD1-205ENST00000469043 LINC00467Q9BRT7 94 aa2.71□□□□□ -1.98
SCFD1-205ENST00000469043 CST9LQ9H4G1 147 aa2.71□□□□□ -1.98
SCFD1-205ENST00000469043 NINQ8N4C6 2090 aa2.71□□□□□ -1.98
SCFD1-205ENST00000469043 ALPK3Q96L96 1907 aa2.71□□□□□ -1.98
SCFD1-205ENST00000469043 NUMA1Q14980 2115 aa2.71□□□□□ -1.98
SCFD1-205ENST00000469043 RP1P56715 2156 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 IGHV1-18A0A0C4DH31 117 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 A0A0G2JMM0 328 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 A0A0J9YX75 114 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 A0A1B0GVG6 124 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 A0A1W2PPB8 328 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 KIR3DP1A8MWS1 328 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 CDC42EP2O14613 210 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 PSCAO43653 123 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 SYNGR2O43760 224 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 AKAIN1P0CW23 69 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 TPT1P13693 172 aaKnown RBP2.7□□□□□ -1.98
SCFD1-205ENST00000469043 LSM3P62310 102 aaKnown RBP2.7□□□□□ -1.98
SCFD1-205ENST00000469043 MRPS36P82909 103 aaKnown RBP2.7□□□□□ -1.98
SCFD1-205ENST00000469043 Q6P435 159 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 IZUMO2Q6UXV1 221 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 AAED1Q7RTV5 226 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 ZNF720Q7Z2F6 126 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 TEN1Q86WV5 123 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 RETNLBQ9BQ08 111 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 HIGD2AQ9BW72 106 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 CCDC167Q9P0B6 97 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 Q9Y3F1 56 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 HSPE1-MOB4S4R3N1 261 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 COL1A2P08123 1366 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 MYO9BQ13459 2157 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 SDK2Q58EX2 2172 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 MUC4Q99102 2169 aa2.7□□□□□ -1.98
SCFD1-205ENST00000469043 GPR179Q6PRD1 2367 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 TRAV3A0A0B4J244 114 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 SPAARA0A1B0GVQ0 90 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 COLCA2A8K830 154 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 M0R129 80 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 SNAPC5O75971 98 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 CPSF4O95639 269 aaKnown RBP2.69□□□□□ -1.98
SCFD1-205ENST00000469043 FABP4P15090 132 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 HIST1H1BP16401 226 aaKnown RBP2.69□□□□□ -1.98
SCFD1-205ENST00000469043 PPP3R1P63098 170 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 EIF4EBP1Q13541 118 aaPredicted RBP2.69□□□□□ -1.98
SCFD1-205ENST00000469043 NNATQ16517 81 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 ESRGQ1W209 222 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 MEIG1Q5JSS6 88 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 Q6ZQT0 140 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 LINC00311Q8N616 119 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 PP6455Q8WZ26 134 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 OR4C12Q96R67 309 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 FKBP11Q9NYL4 201 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 R4GN34 69 aa2.69□□□□□ -1.98
SCFD1-205ENST00000469043 PTPRDP23468 1912 aa2.68□□□□□ -1.98
SCFD1-205ENST00000469043 TET1Q8NFU7 2136 aa2.68□□□□□ -1.98
SCFD1-205ENST00000469043 GNG4P50150 75 aa2.68□□□□□ -1.98
SCFD1-205ENST00000469043 CIB3Q96Q77 187 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-205ENST00000469043 KLK12Q9UKR0 248 aa2.68□□□□□ -1.98
SCFD1-205ENST00000469043 BOKQ9UMX3 212 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-205ENST00000469043 DNAJC15Q9Y5T4 150 aa2.68□□□□□ -1.98
SCFD1-205ENST00000469043 TANC1Q9C0D5 1861 aa2.68□□□□□ -1.98
SCFD1-205ENST00000469043 MYO18AQ92614 2054 aaKnown RBP2.67□□□□□ -1.98
SCFD1-205ENST00000469043 HEATR5BQ9P2D3 2071 aa2.67□□□□□ -1.98
SCFD1-205ENST00000469043 IGHV3-64A0A075B6Q5 118 aa2.67□□□□□ -1.98
SCFD1-205ENST00000469043 OR51F1A6NGY5 319 aa2.67□□□□□ -1.98
SCFD1-205ENST00000469043 LYRM1O43325 122 aa2.67□□□□□ -1.98
SCFD1-205ENST00000469043 OR1I1O60431 355 aa2.67□□□□□ -1.98
SCFD1-205ENST00000469043 CTSDP07339 412 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-205ENST00000469043 ZNF93P35789 620 aaPredicted RBP2.67□□□□□ -1.98
SCFD1-205ENST00000469043 CLLU1Q5K131 121 aa2.67□□□□□ -1.98
SCFD1-205ENST00000469043 Q8IYB0 196 aa2.67□□□□□ -1.98
SCFD1-205ENST00000469043 POP5Q969H6 163 aaKnown RBP2.67□□□□□ -1.98
SCFD1-205ENST00000469043 TAS2R4Q9NYW5 299 aa2.67□□□□□ -1.98
SCFD1-205ENST00000469043 TPRKBQ9Y3C4 175 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms