RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 CNBD2Q96M20 576 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 CIB3Q96Q77 187 aaPredicted RBP2.33□□□□□ -2.04
RBM39-220ENST00000455343 SPXQ9BT56 116 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 ARL6Q9H0F7 186 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 DAZ3Q9NR90 486 aaKnown RBP2.33□□□□□ -2.04
RBM39-220ENST00000455343 COMMD3Q9UBI1 195 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 C14orf166Q9Y224 244 aaKnown RBP2.33□□□□□ -2.04
RBM39-220ENST00000455343 KCNIP3Q9Y2W7 256 aa2.33□□□□□ -2.04
RBM39-220ENST00000455343 TRBV19A0A075B6N1 114 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 TRBV6-4A0A1B0GX49 114 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 FNDC10F2Z333 226 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 WRBO00258 174 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 MED6O75586 246 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 GPX1P07203 203 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 RNASE4P34096 147 aaKnown RBP2.32□□□□□ -2.04
RBM39-220ENST00000455343 SSBP1Q04837 148 aaKnown RBP2.32□□□□□ -2.04
RBM39-220ENST00000455343 GAGE5Q13069 117 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 GAGE6Q13070 117 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 SPANXN5Q5MJ07 72 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 SDIM1Q6ZPB5 146 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 NOTCH2NLQ7Z3S9 236 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 SLC25A29Q8N8R3 303 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 C9orf163Q8N9P6 203 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 NHLRC2Q8NBF2 726 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 ATP6V0E2Q8NHE4 81 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 DNAJC30Q96LL9 226 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 ARPC5LQ9BPX5 153 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 GTSF1LQ9H1H1 148 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 NPVFQ9HCQ7 196 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 ZNF492Q9P255 531 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 PAIP2BQ9ULR5 123 aaKnown RBP2.32□□□□□ -2.04
RBM39-220ENST00000455343 RAB26Q9ULW5 256 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 RPH3ALQ9UNE2 315 aa2.32□□□□□ -2.04
RBM39-220ENST00000455343 TRAV8-1A0A0A6YYK1 113 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 PIGBOS1A0A0B4J2F0 54 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 A0A0D9SG52 128 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 FABP12A6NFH5 140 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 GGTLC3B5MD39 225 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 DISC1C4P0D8 188 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 ANKRD65E5RJM6 399 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 H3BP45 60 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 AGPAT2O15120 278 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 CIDEAO60543 219 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 HPGDSO60760 199 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 LINC00694P0DN24 101 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 ANXA3P12429 323 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 UBE2MP61081 183 aaKnown RBP2.31□□□□□ -2.04
RBM39-220ENST00000455343 SRPXP78539 464 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 SLC38A11Q08AI6 406 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 PDE6HQ13956 83 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 ZNF266Q14584 549 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 Q6AWC8 147 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 TMEM14EPQ6UXP3 125 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 IZUMO2Q6UXV1 221 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 HSD17B11Q8NBQ5 300 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 OR4C5Q8NGB2 326 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 C15orf40Q8WUR7 153 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 RMI2Q96E14 147 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 YIPF6Q96EC8 236 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 PRRT1Q99946 306 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 SRRQ9GZT4 340 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 RABL2BQ9UNT1 228 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 PRELID1Q9Y255 219 aa2.31□□□□□ -2.04
RBM39-220ENST00000455343 STRAPQ9Y3F4 350 aaKnown RBP2.31□□□□□ -2.04
RBM39-220ENST00000455343 IGKV2D-24A0A075B6R9 120 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 IGLV5-45A0A087WSX0 123 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 IGHV3-16A0A0C4DH30 117 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 SMCO3A2RU48 225 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 KRTAP16-1A8MUX0 517 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 SMIM1B2RUZ4 78 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 M0R2P5 195 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 GOSR2O14653 212 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 COX7A2P2O60397 106 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 HOXB5P09067 269 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 AKAIN1P0CW23 69 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 HIST1H1EP10412 219 aaKnown RBP2.3□□□□□ -2.04
RBM39-220ENST00000455343 NCS1P62166 190 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 LSM3P62310 102 aaKnown RBP2.3□□□□□ -2.04
RBM39-220ENST00000455343 MRPS10P82664 201 aaKnown RBP2.3□□□□□ -2.04
RBM39-220ENST00000455343 RPL24P83731 157 aaKnown RBP2.3□□□□□ -2.04
RBM39-220ENST00000455343 RHOHQ15669 191 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 NEDD8Q15843 81 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 BAK1Q16611 211 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 VWC2Q2TAL6 325 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 TMEM128Q5BJH2 165 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 MUC21Q5SSG8 566 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 TMEM78Q5T7P6 136 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 CFAP126Q5VTH2 177 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 C10orf113Q5VZT2 155 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 DPPA3Q6W0C5 159 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 ZNF546Q86UE3 836 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 NIT1Q86X76 327 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 STPG4Q8N801 248 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 RAB2BQ8WUD1 216 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 SMIM4Q8WVI0 70 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 SMIM8Q96KF7 97 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 SCGB3A2Q96PL1 93 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 MGST2Q99735 147 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 PRADC1Q9BSG0 188 aa2.3□□□□□ -2.04
RBM39-220ENST00000455343 GGACTQ9BVM4 153 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms