RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 FBXL19-AS1Q494R0 122 aa4.4□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 TAF15Q92804 592 aaKnown RBP eCLIP4.4□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 TOMM6Q96B49 74 aa4.4□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 SLC25A22Q9H936 323 aa4.4□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 R4GMQ9 66 aa4.4□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 A0A087WW49 117 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 PIGBOS1A0A0B4J2F0 54 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 IGHV3-38A0A0C4DH36 116 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 SMIM1B2RUZ4 78 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 COX7A2LO14548 114 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 NDUFB3O43676 98 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 ZNF73O43830 326 aaPredicted RBP4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 IGKV1D-33P01593 117 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 IGKV1-33P01594 117 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 ZNF688P0C7X2 276 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 CRIP3Q6Q6R5 217 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 LINC00596Q86U02 117 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 DCANP1Q8TF63 244 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 OSTCQ9NRP0 149 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 PCSK5Q92824 1860 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 EXPH5Q8NEV8 1989 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 IGLV3-12A0A075B6K2 115 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 IGHV6-1A0A0B4J1U7 121 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 TRGV8A0A0C4DH27 118 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 C17orf51A8MQB3 221 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 IGLL5B9A064 214 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 VCANP13611 3396 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 ASIPP42127 132 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 RPS27P42677 84 aaKnown RBP4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 DSCR9P59020 149 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 C1orf147Q96MC9 270 aaPredicted RBP4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 HIGD1BQ9P298 99 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 CTSZQ9UBR2 303 aa4.39□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 PHF3Q92576 2039 aaKnown RBP4.38□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 RBP4P02753 201 aa4.38□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 INAFM2P0DMQ5 153 aa4.38□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 LINC00173Q6ZV60 143 aa4.38□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 LCA10Q71F78 164 aa4.38□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 SLC25A15Q9Y619 301 aa4.38□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 HCFC1P51610 2035 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 IGHV1-24A0A0C4DH33 117 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 SMIM27A0A1W2PRY6 76 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 MGST1P10620 155 aaKnown RBP4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 HLA-DRB4P13762 266 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 ZNF823P16415 610 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 MPV17P39210 176 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 PSMG4Q5JS54 123 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 C16orf47Q6ZP98 133 aaPredicted RBP4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 TIMM17AQ99595 171 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 HLA-DRB4X5D2U9 266 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 MYO15AQ9UKN7 3530 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 SPEGQ15772 3267 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 IGHV3OR16-12A0A075B7B8 117 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 M0R378 163 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 LINC00313P59037 77 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 LGALS9BQ3B8N2 356 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 CFAP126Q5VTH2 177 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 GUSBP11Q6P575 273 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 NUP37Q8NFH4 326 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 LINC00479Q96M42 142 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 TMEM243Q9BU79 118 aa4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 ZNF706Q9Y5V0 76 aaPredicted RBP4.37□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 TNRC18O15417 2968 aaPredicted RBP4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 ADAMTS9Q9P2N4 1935 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 IGHV5-10-1A0A0J9YXX1 117 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 NDUFC2-KCTD14E9PQ53 114 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 H3BT86 120 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 SYNGR2O43760 224 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 PPYP01298 95 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 SPRNQ5BIV9 151 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 TEN1Q86WV5 123 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 ZNF575Q86XF7 245 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 PSENENQ9NZ42 101 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 LHFPL6Q9Y693 200 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 SERP1Q9Y6X1 66 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 CNTRLQ7Z7A1 2325 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 UBE2L5PA0A1B0GUS4 154 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 FSTL3O95633 263 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 ZNF138P52744 262 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 FXYD2P54710 66 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 FXYD4P59646 89 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 HBBP68871 147 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 TMEM158Q8WZ71 300 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 DEFB126Q9BYW3 111 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 PRO3102Q9H379 93 aa4.36□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 ARID1AO14497 2285 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 IGLV3-32A0A0A0MS00 114 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 EPM2AB3EWF7 344 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 K7EQG2 157 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 TMEM256-PLSCR3K7ERE1 68 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 SPINK4O60575 86 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 CSN1S1P47710 185 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 SNRPD3P62318 126 aaKnown RBP4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 EBI3Q14213 229 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 RUSC1-AS1Q66K80 236 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 Q6ZRP5 223 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 OR5AS1Q8N127 324 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 HDHD3Q9BSH5 251 aaPredicted RBP4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 SHANK2-AS3Q9BTD1 123 aa4.35□□□□□ -1.71
ALMS1-IT1-201ENST00000441587 C16orf95Q9H693 158 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms