RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 LINC00614P0C842 121 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 HIST1H1DP16402 221 aaKnown RBP1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 CXCL3P19876 107 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 S100A11P31949 105 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 RPS27P42677 84 aaKnown RBP1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 RBP2P50120 134 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 GNG2P59768 71 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 UBE2NP61088 152 aaKnown RBP1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 DAD1P61803 113 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 PSG4Q00888 419 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 PPP1R1AQ13522 171 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF345Q14585 488 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 PMVKQ15126 192 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 MPV17LQ2QL34 196 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 KRTAP19-2Q3LHN2 52 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 TMEM128Q5BJH2 165 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 RNASE10Q5GAN6 216 aaKnown RBP1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 CLLU1Q5K131 121 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 C1orf195Q5TG92 126 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 TEX261Q6UWH6 196 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 GLIPR1L1Q6UWM5 242 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 FBXW12Q6X9E4 464 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 Q6ZR03 302 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 COMMD7Q86VX2 200 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 C12orf45Q8N5I9 185 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 EIF4E3Q8N5X7 224 aaKnown RBP1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 LINC00337Q8N6G1 96 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR2Z1Q8NG97 314 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR5A2Q8NGI9 324 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR51A2Q8NGJ7 313 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR51T1Q8NGJ9 327 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR1L8Q8NGR8 309 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR2T35Q8NGX2 323 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR4K15Q8NH41 348 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR51H1Q8NH63 302 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 RXFP4Q8TDU9 374 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF431Q8TF32 576 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 APOBEC3DQ96AK3 386 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 BORCS7Q96B45 105 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 METTL26Q96S19 204 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 PHB2Q99623 299 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 SIGMAR1Q99720 223 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 GINS4Q9BRT9 223 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 CHAC1Q9BUX1 264 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 NMES1Q9C002 83 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR2H1Q9GZK4 316 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 ATG5Q9H1Y0 275 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR51I2Q9H344 312 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF430Q9H8G1 570 aaPredicted RBP1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 BIN3Q9NQY0 253 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 MCTS1Q9ULC4 181 aaKnown RBP1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 PRELID3BQ9Y3B1 194 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 NOP16Q9Y3C1 178 aaKnown RBP1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 HSPB11Q9Y547 144 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 MPC1Q9Y5U8 109 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 U3KQ87 197 aa1.21□□□□□ -2.22
HMGB1P18-201ENST00000438801 TRAV14DV4A0A0A6YYC5 116 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGKV1-12A0A0C4DH73 117 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 DUXBA0A1W2PPF3 345 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 C9orf170A2RU37 121 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 PGPA6NDG6 321 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 TMEM235A6NFC5 223 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR5H14A6NHG9 310 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 C8orf87E5RJ46 101 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 K7EPK0 472 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 BPY2O14599 106 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 SFT2D2O95562 160 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 MPC2O95563 127 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 NAPSAO96009 420 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 NRASP01111 189 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 IGKV1D-12P01611 117 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 CTSDP07339 412 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 SLC25A6P12236 298 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 PTHLHP12272 177 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 CXCL2P19875 107 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 BLVRBP30043 206 aaPredicted RBP1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 APLNRP35414 380 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 HSPE1P61604 102 aaKnown RBP1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 CACNG7P62955 275 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 GNG3P63215 75 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 CCL8P80075 99 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 DHRS2Q13268 280 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 PMAIP1Q13794 54 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF266Q14584 549 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 SMCO1Q147U7 214 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 MSMO1Q15800 293 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 DEFB135Q30KP9 77 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 C6orf99Q4VX62 202 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 PABPC1L2AQ5JQF8 200 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 FAM78BQ5VT40 261 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 AADACL3Q5VUY0 350 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 OR10K2Q6IF99 312 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 ZNF880Q6PDB4 577 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 IDO2Q6ZQW0 420 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 LINC00173Q6ZV60 143 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 TMEM144Q7Z5S9 345 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 TRAPPC6BQ86SZ2 158 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 Q8IYB0 196 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 LRRC18Q8N456 261 aa1.2□□□□□ -2.22
HMGB1P18-201ENST00000438801 KCNRGQ8N5I3 272 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms