RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 C9orf47Q6ZRZ4 202 aa9.6□□□□□ -0.87
HCG18-236ENST00000438412 ZNF843Q8N446 348 aa9.6□□□□□ -0.87
HCG18-236ENST00000438412 TMEM190Q8WZ59 177 aa9.6□□□□□ -0.87
HCG18-236ENST00000438412 TMEM191AQ9H0A3 160 aa9.6□□□□□ -0.87
HCG18-236ENST00000438412 NPSP0C0P6 89 aa9.6□□□□□ -0.87
HCG18-236ENST00000438412 CACNG7P62955 275 aa9.6□□□□□ -0.87
HCG18-236ENST00000438412 CFHR3Q02985 330 aa9.6□□□□□ -0.87
HCG18-236ENST00000438412 ZFAND2AQ8N6M9 145 aa9.6□□□□□ -0.87
HCG18-236ENST00000438412 KLHDC1Q8N7A1 406 aa9.6□□□□□ -0.87
HCG18-236ENST00000438412 HSPB8Q9UJY1 196 aa9.6□□□□□ -0.87
HCG18-236ENST00000438412 M0R381 172 aa9.59□□□□□ -0.87
HCG18-236ENST00000438412 RNASE4P34096 147 aaKnown RBP9.59□□□□□ -0.87
HCG18-236ENST00000438412 RPS20P60866 119 aaKnown RBP9.59□□□□□ -0.87
HCG18-236ENST00000438412 TMEM208Q9BTX3 173 aa9.59□□□□□ -0.87
HCG18-236ENST00000438412 BEX4Q9NWD9 120 aaPredicted RBP9.59□□□□□ -0.87
HCG18-236ENST00000438412 TNFRSF6BO95407 300 aa9.58□□□□□ -0.88
HCG18-236ENST00000438412 IGKV3-20P01619 116 aa9.58□□□□□ -0.88
HCG18-236ENST00000438412 LINC01545Q5VT33 79 aa9.58□□□□□ -0.88
HCG18-236ENST00000438412 ARL6IP6Q8N6S5 226 aa9.58□□□□□ -0.88
HCG18-236ENST00000438412 CNFNQ9BYD5 112 aa9.58□□□□□ -0.88
HCG18-236ENST00000438412 GNRH2O43555 120 aa9.58□□□□□ -0.88
HCG18-236ENST00000438412 S100A7P31151 101 aa9.58□□□□□ -0.88
HCG18-236ENST00000438412 C18orf65Q6ZTR6 163 aa9.58□□□□□ -0.88
HCG18-236ENST00000438412 C9orf139Q6ZV77 190 aa9.58□□□□□ -0.88
HCG18-236ENST00000438412 FBLL1A6NHQ2 334 aaKnown RBP9.57□□□□□ -0.88
HCG18-236ENST00000438412 ANKRD39Q53RE8 183 aa9.57□□□□□ -0.88
HCG18-236ENST00000438412 MPV17L2Q567V2 206 aa9.57□□□□□ -0.88
HCG18-236ENST00000438412 SPANXN1Q5VSR9 72 aa9.57□□□□□ -0.88
HCG18-236ENST00000438412 LINC01356Q8N9X3 169 aa9.57□□□□□ -0.88
HCG18-236ENST00000438412 DKK2Q9UBU2 259 aa9.57□□□□□ -0.88
HCG18-236ENST00000438412 TMEM8BA6NDV4 472 aa9.57□□□□□ -0.88
HCG18-236ENST00000438412 TCF21O43680 179 aa9.57□□□□□ -0.88
HCG18-236ENST00000438412 COX6B1P14854 86 aa9.57□□□□□ -0.88
HCG18-236ENST00000438412 PET117Q6UWS5 81 aa9.57□□□□□ -0.88
HCG18-236ENST00000438412 USMG5Q96IX5 58 aa9.57□□□□□ -0.88
HCG18-236ENST00000438412 C20orf202A1L168 122 aa9.56□□□□□ -0.88
HCG18-236ENST00000438412 PSMB8P28062 276 aa9.56□□□□□ -0.88
HCG18-236ENST00000438412 LEPP41159 167 aa9.56□□□□□ -0.88
HCG18-236ENST00000438412 DEFB136Q30KP8 78 aa9.56□□□□□ -0.88
HCG18-236ENST00000438412 ANXA2RQ3ZCQ2 193 aa9.56□□□□□ -0.88
HCG18-236ENST00000438412 SCRT2Q9NQ03 307 aa9.56□□□□□ -0.88
HCG18-236ENST00000438412 DAZ1Q9NQZ3 744 aaKnown RBP9.56□□□□□ -0.88
HCG18-236ENST00000438412 M0QZK8 103 aa9.56□□□□□ -0.88
HCG18-236ENST00000438412 HBDP02042 147 aa9.56□□□□□ -0.88
HCG18-236ENST00000438412 PEF1Q9UBV8 284 aaKnown RBP9.56□□□□□ -0.88
HCG18-236ENST00000438412 OR10J6PQ8NGY7 276 aa9.55□□□□□ -0.88
HCG18-236ENST00000438412 DUX3Q96PT4 197 aa9.55□□□□□ -0.88
HCG18-236ENST00000438412 SETXQ7Z333 2677 aaKnown RBP9.55□□□□□ -0.88
HCG18-236ENST00000438412 NOTCH2Q04721 2471 aa9.55□□□□□ -0.88
HCG18-236ENST00000438412 PDZD2O15018 2839 aa9.55□□□□□ -0.88
HCG18-236ENST00000438412 ZNF688P0C7X2 276 aa9.55□□□□□ -0.88
HCG18-236ENST00000438412 COL5A1-AS1Q5SY13 56 aa9.55□□□□□ -0.88
HCG18-236ENST00000438412 TTTY13Q9BZ97 58 aa9.55□□□□□ -0.88
HCG18-236ENST00000438412 MAP1LC3AQ9H492 121 aa9.55□□□□□ -0.88
HCG18-236ENST00000438412 GOLT1BQ9Y3E0 138 aa9.55□□□□□ -0.88
HCG18-236ENST00000438412 HECTD1Q9ULT8 2610 aa9.54□□□□□ -0.88
HCG18-236ENST00000438412 TRAV12-2A0A075B6T6 113 aa9.54□□□□□ -0.88
HCG18-236ENST00000438412 HOXA3O43365 443 aaPredicted RBP9.54□□□□□ -0.88
HCG18-236ENST00000438412 SYNJ2BPP57105 145 aa9.54□□□□□ -0.88
HCG18-236ENST00000438412 SRSF2Q01130 221 aaKnown RBP9.54□□□□□ -0.88
HCG18-236ENST00000438412 C14orf178Q8N769 122 aaPredicted RBP9.54□□□□□ -0.88
HCG18-236ENST00000438412 RPL39LQ96EH5 51 aaKnown RBP9.54□□□□□ -0.88
HCG18-236ENST00000438412 MRPL53Q96EL3 112 aaKnown RBP9.54□□□□□ -0.88
HCG18-236ENST00000438412 SMPXQ9UHP9 88 aa9.54□□□□□ -0.88
HCG18-236ENST00000438412 HSBP1L1C9JCN9 74 aa9.54□□□□□ -0.88
HCG18-236ENST00000438412 NUDT3O95989 172 aa9.54□□□□□ -0.88
HCG18-236ENST00000438412 NRACQ8N912 160 aa9.54□□□□□ -0.88
HCG18-236ENST00000438412 TMEM158Q8WZ71 300 aa9.54□□□□□ -0.88
HCG18-236ENST00000438412 IFI27L1Q96BM0 104 aa9.54□□□□□ -0.88
HCG18-236ENST00000438412 JPT2Q9H910 190 aa9.54□□□□□ -0.88
HCG18-236ENST00000438412 ST20Q9HBF5 79 aa9.54□□□□□ -0.88
HCG18-236ENST00000438412 IGHV4-31P0DP07 118 aa9.53□□□□□ -0.88
HCG18-236ENST00000438412 DCANP1Q8TF63 244 aa9.53□□□□□ -0.88
HCG18-236ENST00000438412 MRPS16Q9Y3D3 137 aaKnown RBP9.53□□□□□ -0.88
HCG18-236ENST00000438412 A0A0G2JLM5 398 aa9.53□□□□□ -0.88
HCG18-236ENST00000438412 SLC25A16P16260 332 aa9.53□□□□□ -0.88
HCG18-236ENST00000438412 S100A4P26447 101 aaKnown RBP9.53□□□□□ -0.88
HCG18-236ENST00000438412 SLC25A34Q6PIV7 304 aa9.53□□□□□ -0.88
HCG18-236ENST00000438412 NEGR1Q7Z3B1 354 aa9.53□□□□□ -0.88
HCG18-236ENST00000438412 OR2K2Q8NGT1 345 aa9.53□□□□□ -0.88
HCG18-236ENST00000438412 FASNP49327 2511 aaKnown RBP9.53□□□□□ -0.88
HCG18-236ENST00000438412 ANK3Q12955 4377 aaKnown RBP9.52□□□□□ -0.88
HCG18-236ENST00000438412 IGLV2-18A0A075B6J9 118 aa9.52□□□□□ -0.89
HCG18-236ENST00000438412 IGHV4OR15-8A0A075B7B6 117 aa9.52□□□□□ -0.89
HCG18-236ENST00000438412 A0A087WW49 117 aa9.52□□□□□ -0.89
HCG18-236ENST00000438412 H3BUA1 57 aa9.52□□□□□ -0.89
HCG18-236ENST00000438412 PSMG4Q5JS54 123 aa9.52□□□□□ -0.89
HCG18-236ENST00000438412 Q5PR19 223 aa9.52□□□□□ -0.89
HCG18-236ENST00000438412 GCN1Q92616 2671 aaKnown RBP9.52□□□□□ -0.89
HCG18-236ENST00000438412 UNC79Q9P2D8 2635 aa9.52□□□□□ -0.89
HCG18-236ENST00000438412 DLEU1O43261 78 aa9.52□□□□□ -0.89
HCG18-236ENST00000438412 C2orf91Q6ZV80 131 aa9.52□□□□□ -0.89
HCG18-236ENST00000438412 PCP2Q8IVA1 136 aa9.52□□□□□ -0.89
HCG18-236ENST00000438412 TRAV12-3A0A0B4J271 114 aa9.51□□□□□ -0.89
HCG18-236ENST00000438412 MGPP08493 103 aa9.51□□□□□ -0.89
HCG18-236ENST00000438412 RNASE3P12724 160 aaKnown RBP9.51□□□□□ -0.89
HCG18-236ENST00000438412 LINC00477Q96M19 166 aa9.51□□□□□ -0.89
HCG18-236ENST00000438412 Q96MF0 132 aa9.51□□□□□ -0.89
HCG18-236ENST00000438412 MS4A6AQ9H2W1 248 aa9.51□□□□□ -0.89
HCG18-236ENST00000438412 CD5LO43866 347 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms