RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 ZNF747Q9BV97 191 aa11.07□□□□□ -0.64
RFTN1-203ENST00000432519 FSHBP01225 129 aa11.07□□□□□ -0.64
RFTN1-203ENST00000432519 OR5AL1P0C617 328 aa11.07□□□□□ -0.64
RFTN1-203ENST00000432519 WFDC3Q8IUB2 231 aa11.07□□□□□ -0.64
RFTN1-203ENST00000432519 SMPXQ9UHP9 88 aa11.07□□□□□ -0.64
RFTN1-203ENST00000432519 HELZ2Q9BYK8 2649 aaKnown RBP11.06□□□□□ -0.64
RFTN1-203ENST00000432519 TRAV26-2A0A0B4J265 109 aa11.06□□□□□ -0.64
RFTN1-203ENST00000432519 Q6ZN92 141 aa11.06□□□□□ -0.64
RFTN1-203ENST00000432519 H3BVH4 76 aa11.06□□□□□ -0.64
RFTN1-203ENST00000432519 HOXA3O43365 443 aaPredicted RBP11.06□□□□□ -0.64
RFTN1-203ENST00000432519 DEFB113Q30KQ7 82 aa11.06□□□□□ -0.64
RFTN1-203ENST00000432519 LBHQ53QV2 105 aaPredicted RBP11.05□□□□□ -0.64
RFTN1-203ENST00000432519 DMRTA1Q5VZB9 504 aa11.05□□□□□ -0.64
RFTN1-203ENST00000432519 KRTAP1-3Q8IUG1 177 aa11.05□□□□□ -0.64
RFTN1-203ENST00000432519 PPP1R14DQ9NXH3 145 aa11.05□□□□□ -0.64
RFTN1-203ENST00000432519 J3QLI3 93 aa11.05□□□□□ -0.64
RFTN1-203ENST00000432519 NUTF2P61970 127 aaKnown RBP11.05□□□□□ -0.64
RFTN1-203ENST00000432519 Q96MF0 132 aa11.05□□□□□ -0.64
RFTN1-203ENST00000432519 MAP1LC3CQ9BXW4 147 aa11.05□□□□□ -0.64
RFTN1-203ENST00000432519 UQCR10Q9UDW1 63 aa11.05□□□□□ -0.64
RFTN1-203ENST00000432519 TFPI2P48307 235 aa11.04□□□□□ -0.64
RFTN1-203ENST00000432519 OR8A1Q8NGG7 326 aa11.04□□□□□ -0.64
RFTN1-203ENST00000432519 VPREB3Q9UKI3 123 aa11.04□□□□□ -0.64
RFTN1-203ENST00000432519 Q6YL49 198 aa11.04□□□□□ -0.64
RFTN1-203ENST00000432519 OR10J6PQ8NGY7 276 aa11.04□□□□□ -0.64
RFTN1-203ENST00000432519 DCANP1Q8TF63 244 aa11.04□□□□□ -0.64
RFTN1-203ENST00000432519 ZNF702PQ9H963 129 aa11.04□□□□□ -0.64
RFTN1-203ENST00000432519 NIPBLQ6KC79 2804 aaeCLIP11.04□□□□□ -0.64
RFTN1-203ENST00000432519 C18orf65Q6ZTR6 163 aa11.03□□□□□ -0.64
RFTN1-203ENST00000432519 PDZD2O15018 2839 aa11.03□□□□□ -0.64
RFTN1-203ENST00000432519 RNASE4P34096 147 aaKnown RBP11.03□□□□□ -0.64
RFTN1-203ENST00000432519 FAM19A4Q96LR4 140 aa11.03□□□□□ -0.64
RFTN1-203ENST00000432519 LINC00477Q96M19 166 aa11.03□□□□□ -0.64
RFTN1-203ENST00000432519 HSPB8Q9UJY1 196 aa11.03□□□□□ -0.64
RFTN1-203ENST00000432519 ZNF580Q9UK33 172 aa11.03□□□□□ -0.64
RFTN1-203ENST00000432519 UFC1Q9Y3C8 167 aa11.03□□□□□ -0.64
RFTN1-203ENST00000432519 MUC4Q99102 2169 aa11.03□□□□□ -0.64
RFTN1-203ENST00000432519 TCF21O43680 179 aa11.02□□□□□ -0.64
RFTN1-203ENST00000432519 TNFRSF6BO95407 300 aa11.02□□□□□ -0.64
RFTN1-203ENST00000432519 TSPOP30536 169 aa11.02□□□□□ -0.64
RFTN1-203ENST00000432519 MTORP42345 2549 aa11.02□□□□□ -0.64
RFTN1-203ENST00000432519 OVOL1O14753 267 aa11.02□□□□□ -0.65
RFTN1-203ENST00000432519 GNRH2O43555 120 aa11.02□□□□□ -0.65
RFTN1-203ENST00000432519 SYNJ2BPP57105 145 aa11.02□□□□□ -0.65
RFTN1-203ENST00000432519 ANXA2RQ3ZCQ2 193 aa11.02□□□□□ -0.65
RFTN1-203ENST00000432519 LINC01545Q5VT33 79 aa11.02□□□□□ -0.65
RFTN1-203ENST00000432519 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.65
RFTN1-203ENST00000432519 PET117Q6UWS5 81 aa11.02□□□□□ -0.65
RFTN1-203ENST00000432519 KLHDC1Q8N7A1 406 aa11.02□□□□□ -0.65
RFTN1-203ENST00000432519 IGHV4OR15-8A0A075B7B6 117 aa11.01□□□□□ -0.65
RFTN1-203ENST00000432519 A0A087WW49 117 aa11.01□□□□□ -0.65
RFTN1-203ENST00000432519 DEFB136Q30KP8 78 aa11.01□□□□□ -0.65
RFTN1-203ENST00000432519 SPANXN1Q5VSR9 72 aa11.01□□□□□ -0.65
RFTN1-203ENST00000432519 SNAI2O43623 268 aa11.01□□□□□ -0.65
RFTN1-203ENST00000432519 TCTAP57738 103 aa11.01□□□□□ -0.65
RFTN1-203ENST00000432519 STPG4Q8N801 248 aa11.01□□□□□ -0.65
RFTN1-203ENST00000432519 LENEPQ9Y5L5 61 aa11.01□□□□□ -0.65
RFTN1-203ENST00000432519 K7EMT4 169 aa11□□□□□ -0.65
RFTN1-203ENST00000432519 M0R381 172 aa11□□□□□ -0.65
RFTN1-203ENST00000432519 ZNF688P0C7X2 276 aa11□□□□□ -0.65
RFTN1-203ENST00000432519 C18orf15Q96N68 181 aa11□□□□□ -0.65
RFTN1-203ENST00000432519 MS4A6AQ9H2W1 248 aa11□□□□□ -0.65
RFTN1-203ENST00000432519 LAMTOR2Q9Y2Q5 125 aa11□□□□□ -0.65
RFTN1-203ENST00000432519 IGKV3-20P01619 116 aa10.99□□□□□ -0.65
RFTN1-203ENST00000432519 NRACQ8N912 160 aa10.99□□□□□ -0.65
RFTN1-203ENST00000432519 WFDC11Q8NEX6 87 aa10.99□□□□□ -0.65
RFTN1-203ENST00000432519 TRAV21A0A0B4J279 112 aa10.99□□□□□ -0.65
RFTN1-203ENST00000432519 HBDP02042 147 aa10.99□□□□□ -0.65
RFTN1-203ENST00000432519 MAP1LC3AQ9H492 121 aa10.99□□□□□ -0.65
RFTN1-203ENST00000432519 IGLV2-18A0A075B6J9 118 aa10.98□□□□□ -0.65
RFTN1-203ENST00000432519 C20orf202A1L168 122 aa10.98□□□□□ -0.65
RFTN1-203ENST00000432519 HINT1P49773 126 aaPredicted RBP10.98□□□□□ -0.65
RFTN1-203ENST00000432519 WNK1Q9H4A3 2382 aa10.98□□□□□ -0.65
RFTN1-203ENST00000432519 RNASE3P12724 160 aaKnown RBP10.98□□□□□ -0.65
RFTN1-203ENST00000432519 G0S2P27469 103 aa10.98□□□□□ -0.65
RFTN1-203ENST00000432519 CACNG7P62955 275 aa10.98□□□□□ -0.65
RFTN1-203ENST00000432519 DUX3Q96PT4 197 aa10.98□□□□□ -0.65
RFTN1-203ENST00000432519 IGHV4-4A0A075B6R2 117 aa10.97□□□□□ -0.65
RFTN1-203ENST00000432519 PPBPP02775 128 aa10.97□□□□□ -0.65
RFTN1-203ENST00000432519 HOXD3P31249 432 aaPredicted RBP10.97□□□□□ -0.65
RFTN1-203ENST00000432519 PSMG4Q5JS54 123 aa10.97□□□□□ -0.65
RFTN1-203ENST00000432519 ADAMTSL5Q6ZMM2 481 aa10.97□□□□□ -0.65
RFTN1-203ENST00000432519 Q6ZVH6 145 aa10.97□□□□□ -0.65
RFTN1-203ENST00000432519 OR2K2Q8NGT1 345 aa10.97□□□□□ -0.65
RFTN1-203ENST00000432519 MYOZ3Q8TDC0 251 aa10.97□□□□□ -0.65
RFTN1-203ENST00000432519 TCAPO15273 167 aa10.97□□□□□ -0.65
RFTN1-203ENST00000432519 LEPP41159 167 aa10.97□□□□□ -0.65
RFTN1-203ENST00000432519 APRG1Q8IVJ8 170 aa10.97□□□□□ -0.65
RFTN1-203ENST00000432519 LGALS1P09382 135 aaKnown RBP10.96□□□□□ -0.65
RFTN1-203ENST00000432519 S100A4P26447 101 aaKnown RBP10.96□□□□□ -0.65
RFTN1-203ENST00000432519 C14orf178Q8N769 122 aaPredicted RBP10.96□□□□□ -0.65
RFTN1-203ENST00000432519 ST20Q9HBF5 79 aa10.96□□□□□ -0.65
RFTN1-203ENST00000432519 ANK3Q12955 4377 aaKnown RBP10.96□□□□□ -0.66
RFTN1-203ENST00000432519 TRAV12-2A0A075B6T6 113 aa10.96□□□□□ -0.66
RFTN1-203ENST00000432519 IFI27L1Q96BM0 104 aa10.96□□□□□ -0.66
RFTN1-203ENST00000432519 SCRT2Q9NQ03 307 aa10.96□□□□□ -0.66
RFTN1-203ENST00000432519 DKK2Q9UBU2 259 aa10.96□□□□□ -0.66
RFTN1-203ENST00000432519 KLLNB2CW77 178 aa10.95□□□□□ -0.66
RFTN1-203ENST00000432519 ANKRD39Q53RE8 183 aa10.95□□□□□ -0.66
RFTN1-203ENST00000432519 KMT2BQ9UMN6 2715 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms