RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 PCBD1P61457 104 aa0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 TMEM35BQ8NCS4 154 aa0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 OR4S1Q8NGB4 309 aa0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 CDC26Q8NHZ8 85 aa0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 BRK1Q8WUW1 75 aa0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 NAT14Q8WUY8 206 aa0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 MAGOHBQ96A72 148 aaKnown RBP0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 BPESC1Q9GZL8 116 aa0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 SPANXA1Q9NS26 97 aa0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 TAS2R8Q9NYW2 309 aa0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 PTPRDP23468 1912 aa0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 BLMP54132 1417 aaPredicted RBP0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 KDM6BO15054 1643 aa0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 MAST4O15021 2626 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 LOC107984640A0A0U1RRK4 108 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 RBAKDNA6NC62 111 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 ZNF670-ZNF695F2Z2N8 137 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 OR2H2O95918 312 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 POLR2HP52434 150 aaKnown RBP0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 TFAMQ00059 246 aaKnown RBP0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 PLGLB1Q02325 96 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 SAMD13Q5VXD3 122 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 NDUFA11Q86Y39 141 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 OTOSQ8NHW6 89 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 CCDC115Q96NT0 180 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 CBLN4Q9NTU7 201 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 CALML5Q9NZT1 146 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 METTL1Q9UBP6 276 aaKnown RBP0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 TRAPPC2LQ9UL33 140 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 U3KQA8 63 aa0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 CDK12Q9NYV4 1490 aaPredicted RBP0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 BORCS7-ASMTA0A0B4J1R7 106 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 BDP1A6H8Y1 2624 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 M0QZK8 103 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 SMIM24O75264 130 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 DPM2O94777 84 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 RBP4P02753 201 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 APODP05090 189 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 PYYP10082 97 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 NEFHP12036 1026 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 TPRP12270 2363 aaKnown RBP0□□□□□ -2.41
TIMM9P3-201ENST00000428659 PTPRZ1P23471 2315 aaPredicted RBP0□□□□□ -2.41
TIMM9P3-201ENST00000428659 S100GP29377 79 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 HSD17B12Q53GQ0 312 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 TMEM128Q5BJH2 165 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 NUP210LQ5VU65 1888 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 HRCT1Q6UXD1 115 aa0□□□□□ -2.41
TIMM9P3-201ENST00000428659 N4BP2Q86UW6 1770 aaPredicted RBP0□□□□□ -2.41
TIMM9P3-201ENST00000428659 FAT4Q6V0I7 4981 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 FAM135BQ49AJ0 1406 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 MED23Q9ULK4 1368 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 TRAV17A0A0B4J275 112 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 TCRBV3S1A0A5B6 114 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 C10orf142B7Z368 130 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 IFITM1P13164 125 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 G0S2P27469 103 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 GNG10P50151 68 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 AKR1D1P51857 326 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 RPS28P62857 69 aaKnown RBP-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 SLC25A26Q70HW3 274 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 SMIM15Q7Z3B0 74 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 OR8I2Q8N0Y5 310 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 SLC35B3Q9H1N7 401 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 SCP2D1Q9UJQ7 156 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 ERG28Q9UKR5 140 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 HSPB11Q9Y547 144 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 MEGF8Q7Z7M0 2845 aa-0.01□□□□□ -2.41
TIMM9P3-201ENST00000428659 CDK13Q14004 1512 aaKnown RBP-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 SPAG17Q6Q759 2223 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 CCDC171Q6TFL3 1326 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 TSTD3H0UI37 97 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 CCDC179H3BU77 68 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 PAEPP09466 180 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 COX4I1P13073 169 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 SSBP1Q04837 148 aaKnown RBP-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 OR8B8Q15620 311 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 FAM74A4Q5TZK3 123 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 CYP2G1PQ6ZSU1 146 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 ATP6V0E2Q8NHE4 81 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 SMIM11BQ8TCY0 68 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 TMEM242Q9NWH2 141 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 KIAA1549LQ6ZVL6 1849 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 DMBT1Q9UGM3 2413 aaPredicted RBP-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 CTTNBP2Q8WZ74 1663 aa-0.02□□□□□ -2.41
TIMM9P3-201ENST00000428659 PTPRGP23470 1445 aa-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 CPDO75976 1380 aa-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 RBBP6Q7Z6E9 1792 aaKnown RBP-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 J3KT08 172 aa-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 TCRAP04437 139 aa-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 SLC25A5P05141 298 aaKnown RBP-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 RPL7P18124 248 aaKnown RBP-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 EMX2Q04743 252 aa-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 PPP1R2P3Q6NXS1 205 aa-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 DYNLRB2Q8TF09 96 aa-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 DDA1Q9BW61 102 aa-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 USP54Q70EL1 1684 aa-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 UNC13BO14795 1591 aa-0.03□□□□□ -2.41
TIMM9P3-201ENST00000428659 LAMC3Q9Y6N6 1575 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms