RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 FZR1Q9UM11 496 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 LENEPQ9Y5L5 61 aa3.98□□□□□ -1.77
RIF1-203ENST00000428287 H7C1H1 209 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 TIMM8AO60220 97 aaPredicted RBP3.97□□□□□ -1.77
RIF1-203ENST00000428287 LYZL6O75951 148 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 SLC25A16P16260 332 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 ZNF474Q6S9Z5 364 aaPredicted RBP3.97□□□□□ -1.77
RIF1-203ENST00000428287 AMELXQ99217 191 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 GAS8-AS1O95177 125 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 PLGLAQ15195 96 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 PRSS1P07477 247 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 RPL27AP46776 148 aaKnown RBP3.97□□□□□ -1.77
RIF1-203ENST00000428287 SPRNQ5BIV9 151 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 C17orf77Q96MU5 243 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 FBXL15Q9H469 300 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 SPRR3Q9UBC9 169 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 ZNF469Q96JG9 3925 aaPredicted RBP3.97□□□□□ -1.77
RIF1-203ENST00000428287 RPL7P18124 248 aaKnown RBP3.97□□□□□ -1.77
RIF1-203ENST00000428287 GAGE2BQ13066 116 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 GAGE2EQ4V326 116 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 Q8N8P6 123 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 GAGE2DQ9UEU5 116 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 NCBP2LA6PVI3 153 aaKnown RBP3.97□□□□□ -1.77
RIF1-203ENST00000428287 H3BRN7 92 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 IGHV3-33P01772 117 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 ZNF688P0C7X2 276 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 HIST1H4GQ99525 98 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 MRPL20Q9BYC9 149 aaKnown RBP3.97□□□□□ -1.77
RIF1-203ENST00000428287 TRAV40A0A0B4J280 105 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 PPIFP30405 207 aaKnown RBP3.97□□□□□ -1.77
RIF1-203ENST00000428287 MRPL23Q16540 153 aaKnown RBP3.97□□□□□ -1.77
RIF1-203ENST00000428287 C6orf15Q6UXA7 325 aaPredicted RBP3.97□□□□□ -1.77
RIF1-203ENST00000428287 C1orf122Q6ZSJ8 110 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 NDUFA11Q86Y39 141 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 RNF5Q99942 180 aa3.97□□□□□ -1.77
RIF1-203ENST00000428287 LOC389332A0A1B0GUA5 103 aa3.96□□□□□ -1.77
RIF1-203ENST00000428287 HLA-DMBP28068 263 aa3.96□□□□□ -1.77
RIF1-203ENST00000428287 OR11H6Q8NGC7 330 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 IGHV1-69DA0A0B4J2H0 117 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 P0DMU3 169 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 FAM231AP0DMU4 169 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 FAM231CP0DMU5 169 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 ZNF80P51504 273 aaPredicted RBP3.96□□□□□ -1.78
RIF1-203ENST00000428287 SMIM2Q9BVW6 85 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 HIGD1AQ9Y241 93 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 IL4P05112 153 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 MSRB1Q9NZV6 116 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 PROCRQ9UNN8 238 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 IGHV1-18A0A0C4DH31 117 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 A8MWV9 139 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 HOXA3O43365 443 aaPredicted RBP3.96□□□□□ -1.78
RIF1-203ENST00000428287 DLX6P56179 175 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 DEFB119Q8N690 84 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 OR10J6PQ8NGY7 276 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 RNF125Q96EQ8 232 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 ASCL2Q99929 193 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 HES7Q9BYE0 225 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 TPSG1Q9NRR2 321 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 PRO1854Q9UHT4 67 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 CFC1BP0CG36 223 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 CFC1P0CG37 223 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 FAM201AQ5SY85 155 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 DTX2Q86UW9 622 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 NEXN-AS1Q8NBZ9 246 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 GAFA1Q96PS6 74 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 ZNRD1Q9P1U0 126 aa3.96□□□□□ -1.78
RIF1-203ENST00000428287 HERV-K104P63124 156 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 PAPPA-AS1Q5QFB9 102 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 ODF3Q96PU9 254 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 RBAKDNA6NC62 111 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 SUMO2P61956 95 aaKnown RBP3.95□□□□□ -1.78
RIF1-203ENST00000428287 RPS28P62857 69 aaKnown RBP3.95□□□□□ -1.78
RIF1-203ENST00000428287 LAGE3Q14657 143 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 FANCD2OSQ96PS1 177 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 SPANXDQ9BXN6 97 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 DEFB121Q5J5C9 76 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 GTSCR1Q86UQ5 136 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 C12orf49Q9H741 205 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 CD59P13987 128 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 DIAPH2-AS1Q14236 149 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 TMEM155Q4W5P6 130 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 PTH2Q96A98 100 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 TMEM126AQ9H061 195 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 RALYQ9UKM9 306 aaKnown RBP3.95□□□□□ -1.78
RIF1-203ENST00000428287 TRBV7-7A0A0K0K1E9 115 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 CRYGDP07320 174 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 ZNF883P0CG24 379 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 ORMDL2Q53FV1 153 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 HES3Q5TGS1 186 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 LINC01548A6NM66 108 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 VMA21Q3ZAQ7 101 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 APRG1Q8IVJ8 170 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 RASL11BQ9BPW5 248 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 ANAPC13Q9BS18 74 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 AAMDCQ9H7C9 122 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 TMEM160Q9NX00 188 aa3.95□□□□□ -1.78
RIF1-203ENST00000428287 A0A1B0GX51 115 aa3.94□□□□□ -1.78
RIF1-203ENST00000428287 TCL1BO95988 128 aa3.94□□□□□ -1.78
RIF1-203ENST00000428287 PPP1R17O96001 155 aa3.94□□□□□ -1.78
RIF1-203ENST00000428287 PMS2CLQ68D20 193 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms