RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 KLK9Q9UKQ9 250 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 CD5LO43866 347 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 ZC2HC1BQ5TFG8 222 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 PATE2Q6UY27 113 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 C16orf74Q96GX8 76 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 NHP2Q9NX24 153 aaKnown RBP9.3□□□□□ -0.92
PTPRF-205ENST00000414879 F5H768 121 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 IGHG4P01861 327 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 MTURNQ8N3F0 131 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 PKIGQ9Y2B9 76 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 SFTA2Q6UW10 78 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 ZNF843Q8N446 348 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 TP53TG1Q9Y2A0 90 aa9.3□□□□□ -0.92
PTPRF-205ENST00000414879 RITA1Q96K30 269 aa9.29□□□□□ -0.92
PTPRF-205ENST00000414879 FAM167A-AS1Q96KT0 104 aa9.29□□□□□ -0.92
PTPRF-205ENST00000414879 DYSFO75923 2080 aa9.29□□□□□ -0.92
PTPRF-205ENST00000414879 DOCK11Q5JSL3 2073 aa9.29□□□□□ -0.92
PTPRF-205ENST00000414879 C2orf70A6NJV1 201 aa9.29□□□□□ -0.92
PTPRF-205ENST00000414879 SNAI2O43623 268 aa9.29□□□□□ -0.92
PTPRF-205ENST00000414879 KLF5Q13887 457 aaPredicted RBP9.29□□□□□ -0.92
PTPRF-205ENST00000414879 CRIP3Q6Q6R5 217 aa9.29□□□□□ -0.92
PTPRF-205ENST00000414879 SMKR1H3BMG3 65 aa9.29□□□□□ -0.92
PTPRF-205ENST00000414879 S100A7L2Q5SY68 101 aa9.29□□□□□ -0.92
PTPRF-205ENST00000414879 Q6YL49 198 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 SELENOKQ9Y6D0 94 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 GAGE12JA6NER3 117 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 LGALS9O00182 355 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 GAGE1Q13065 139 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 GAGE4Q13068 117 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 GAGE5Q13069 117 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 EIF4EBP1Q13541 118 aaPredicted RBP9.28□□□□□ -0.92
PTPRF-205ENST00000414879 GAGE13Q4V321 117 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 FANCD2OSQ96PS1 177 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 IGKV3D-20A0A0C4DH25 116 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 A0A1B0GWB2 263 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 GAGE12BA1L429 117 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 C19orf84I3L1E1 186 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 LEPROTO15243 131 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 GAGE7O76087 117 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 GAGE12FP0CL80 117 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 GAGE12GP0CL81 117 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 GAGE12IP0CL82 117 aa9.28□□□□□ -0.92
PTPRF-205ENST00000414879 IGHV1-24A0A0C4DH33 117 aa9.27□□□□□ -0.93
PTPRF-205ENST00000414879 ODF3Q96PU9 254 aa9.27□□□□□ -0.93
PTPRF-205ENST00000414879 MED12LQ86YW9 2145 aa9.27□□□□□ -0.93
PTPRF-205ENST00000414879 EML6Q6ZMW3 1958 aa9.27□□□□□ -0.93
PTPRF-205ENST00000414879 LY6LH3BQJ8 138 aa9.27□□□□□ -0.93
PTPRF-205ENST00000414879 CFHR4Q92496 578 aa9.27□□□□□ -0.93
PTPRF-205ENST00000414879 ZNF479Q96JC4 524 aa9.27□□□□□ -0.93
PTPRF-205ENST00000414879 IGF2BP2-AS1Q96M15 143 aa9.27□□□□□ -0.93
PTPRF-205ENST00000414879 PSCAO43653 123 aa9.27□□□□□ -0.93
PTPRF-205ENST00000414879 IGHV4-31P0DP07 118 aa9.27□□□□□ -0.93
PTPRF-205ENST00000414879 ATXN8Q156A1 80 aa9.27□□□□□ -0.93
PTPRF-205ENST00000414879 ZNRF2Q8NHG8 242 aa9.27□□□□□ -0.93
PTPRF-205ENST00000414879 EGR2P11161 476 aaPredicted RBP9.26□□□□□ -0.93
PTPRF-205ENST00000414879 PRIMA1Q86XR5 153 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 PHLDA1Q8WV24 401 aaPredicted RBP9.26□□□□□ -0.93
PTPRF-205ENST00000414879 JPT2Q9H910 190 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 TRAV12-2A0A075B6T6 113 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 SCGB1A1P11684 91 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 HERVK_113P63121 156 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 SLURP1P55000 103 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 C17orf77Q96MU5 243 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 CHAC1Q9BUX1 264 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 IGHV4OR15-8A0A075B7B6 117 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 A0A087WW49 117 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 TRAV13-1A0A0B4J241 112 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 H3BUT2 72 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 SIGLEC8Q9NYZ4 499 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 KMT2EQ8IZD2 1858 aa9.26□□□□□ -0.93
PTPRF-205ENST00000414879 K7EN84 100 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 CRYGBP07316 175 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 HLA-DRB4P13762 266 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 HLA-DRB4X5D2U9 266 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 MED13LQ71F56 2210 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 PAX4O43316 350 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 RNASE1P07998 156 aaKnown RBP9.25□□□□□ -0.93
PTPRF-205ENST00000414879 IGLC2P0DOY2 106 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 ESDP10768 282 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 NDUFA11Q86Y39 141 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 SPANXA1Q9NS26 97 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 TNRC6BQ9UPQ9 1833 aaKnown RBP9.25□□□□□ -0.93
PTPRF-205ENST00000414879 F8VRH5 84 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 TMEM95Q3KNT9 176 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 PROP1O75360 226 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 PYY3Q5JQD4 70 aa9.25□□□□□ -0.93
PTPRF-205ENST00000414879 CHD3Q12873 2000 aaKnown RBP9.25□□□□□ -0.93
PTPRF-205ENST00000414879 COA6Q5JTJ3 125 aaKnown RBP9.24□□□□□ -0.93
PTPRF-205ENST00000414879 SPART-AS1P0CW21 52 aa9.24□□□□□ -0.93
PTPRF-205ENST00000414879 TAL2Q16559 108 aa9.24□□□□□ -0.93
PTPRF-205ENST00000414879 NRGNQ92686 78 aa9.24□□□□□ -0.93
PTPRF-205ENST00000414879 EML5Q05BV3 1969 aa9.24□□□□□ -0.93
PTPRF-205ENST00000414879 DNAJC9-AS1A6NH13 148 aa9.24□□□□□ -0.93
PTPRF-205ENST00000414879 NPYP01303 97 aa9.23□□□□□ -0.93
PTPRF-205ENST00000414879 C22orf34Q6ZV56 151 aa9.23□□□□□ -0.93
PTPRF-205ENST00000414879 Q71RC1 249 aaPredicted RBP9.23□□□□□ -0.93
PTPRF-205ENST00000414879 U3KQE9 123 aa9.23□□□□□ -0.93
PTPRF-205ENST00000414879 CACNA1AO00555 2505 aa9.23□□□□□ -0.93
PTPRF-205ENST00000414879 SAMD5Q5TGI4 173 aa9.23□□□□□ -0.93
PTPRF-205ENST00000414879 POLR3KQ9Y2Y1 108 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms