RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 RBAKDNA6NC62 111 aa10.87□□□□□ -0.67
CHMP3-203ENST00000409225 RNF222A6NCQ9 220 aa10.87□□□□□ -0.67
CHMP3-203ENST00000409225 GGTLC3B5MD39 225 aa10.87□□□□□ -0.67
CHMP3-203ENST00000409225 CCSO14618 274 aa10.87□□□□□ -0.67
CHMP3-203ENST00000409225 IGLV2-11P01706 119 aa10.87□□□□□ -0.67
CHMP3-203ENST00000409225 OR51M1Q9H341 326 aa10.87□□□□□ -0.67
CHMP3-203ENST00000409225 COX11Q9Y6N1 276 aa10.87□□□□□ -0.67
CHMP3-203ENST00000409225 TRBV6-4A0A1B0GX49 114 aa10.86□□□□□ -0.67
CHMP3-203ENST00000409225 TYMSP04818 313 aa10.86□□□□□ -0.67
CHMP3-203ENST00000409225 CHAC2Q8WUX2 184 aa10.86□□□□□ -0.67
CHMP3-203ENST00000409225 FXYD5Q96DB9 178 aa10.86□□□□□ -0.67
CHMP3-203ENST00000409225 PAXXQ9BUH6 204 aa10.86□□□□□ -0.67
CHMP3-203ENST00000409225 MRPS26Q9BYN8 205 aaKnown RBP10.86□□□□□ -0.67
CHMP3-203ENST00000409225 IGKV2D-24A0A075B6R9 120 aa10.85□□□□□ -0.67
CHMP3-203ENST00000409225 CFAP126Q5VTH2 177 aa10.85□□□□□ -0.67
CHMP3-203ENST00000409225 RMI2Q96E14 147 aa10.85□□□□□ -0.67
CHMP3-203ENST00000409225 FAM25EA8MYX2 175 aa10.84□□□□□ -0.67
CHMP3-203ENST00000409225 S100A11P31949 105 aa10.84□□□□□ -0.67
CHMP3-203ENST00000409225 SULT1A1P50225 295 aa10.84□□□□□ -0.67
CHMP3-203ENST00000409225 RANP62826 216 aaKnown RBP10.84□□□□□ -0.67
CHMP3-203ENST00000409225 ZNF876PQ49A33 203 aa10.84□□□□□ -0.67
CHMP3-203ENST00000409225 DPPA3Q6W0C5 159 aa10.84□□□□□ -0.67
CHMP3-203ENST00000409225 MITD1Q8WV92 249 aa10.84□□□□□ -0.67
CHMP3-203ENST00000409225 DNAJC30Q96LL9 226 aa10.84□□□□□ -0.67
CHMP3-203ENST00000409225 ATP5SQ99766 215 aa10.84□□□□□ -0.67
CHMP3-203ENST00000409225 C11orf1Q9H5F2 150 aa10.84□□□□□ -0.67
CHMP3-203ENST00000409225 SDF2L1Q9HCN8 221 aa10.84□□□□□ -0.67
CHMP3-203ENST00000409225 LENEPQ9Y5L5 61 aa10.84□□□□□ -0.67
CHMP3-203ENST00000409225 IGSF23A1L1A6 192 aa10.83□□□□□ -0.68
CHMP3-203ENST00000409225 TMBIM6P55061 237 aa10.83□□□□□ -0.68
CHMP3-203ENST00000409225 NPCDR1Q9BY65 106 aa10.83□□□□□ -0.68
CHMP3-203ENST00000409225 TRAV21A0A0B4J279 112 aa10.82□□□□□ -0.68
CHMP3-203ENST00000409225 DIRC3C9JPN6 131 aa10.82□□□□□ -0.68
CHMP3-203ENST00000409225 F6UZH7 168 aa10.82□□□□□ -0.68
CHMP3-203ENST00000409225 HBG1P69891 147 aa10.82□□□□□ -0.68
CHMP3-203ENST00000409225 HBG2P69892 147 aa10.82□□□□□ -0.68
CHMP3-203ENST00000409225 STX12Q86Y82 276 aa10.82□□□□□ -0.68
CHMP3-203ENST00000409225 BCL7BQ9BQE9 202 aa10.82□□□□□ -0.68
CHMP3-203ENST00000409225 RPH3ALQ9UNE2 315 aa10.82□□□□□ -0.68
CHMP3-203ENST00000409225 TRAV8-1A0A0A6YYK1 113 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 GAGE12JA6NER3 117 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 NAP1L6A6NFF2 107 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 OR7C2O60412 319 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 CIDEAO60543 219 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 PVALBP20472 110 aaPredicted RBP10.81□□□□□ -0.68
CHMP3-203ENST00000409225 ASIPP42127 132 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 INPP1P49441 399 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 S100A10P60903 97 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 GAGE1Q13065 139 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 GAGE4Q13068 117 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 GAGE5Q13069 117 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 LINC01559Q495D7 138 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 GAGE13Q4V321 117 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 ASB13Q8WXK3 278 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 HYLS1Q96M11 299 aa10.81□□□□□ -0.68
CHMP3-203ENST00000409225 LYRM2Q9NU23 88 aaPredicted RBP10.81□□□□□ -0.68
CHMP3-203ENST00000409225 H3BMQ9 156 aa10.8□□□□□ -0.68
CHMP3-203ENST00000409225 NOL3O60936 208 aaKnown RBP10.8□□□□□ -0.68
CHMP3-203ENST00000409225 ATP6V1FQ16864 119 aa10.8□□□□□ -0.68
CHMP3-203ENST00000409225 SPANXN2Q5MJ10 180 aa10.8□□□□□ -0.68
CHMP3-203ENST00000409225 TMEM252Q8N6L7 170 aa10.8□□□□□ -0.68
CHMP3-203ENST00000409225 THAP6Q8TBB0 222 aa10.8□□□□□ -0.68
CHMP3-203ENST00000409225 KCNS1Q96KK3 526 aa10.8□□□□□ -0.68
CHMP3-203ENST00000409225 SH3BGRL3Q9H299 93 aa10.8□□□□□ -0.68
CHMP3-203ENST00000409225 MGST1P10620 155 aaKnown RBP10.79□□□□□ -0.68
CHMP3-203ENST00000409225 TMED6Q8WW62 240 aa10.79□□□□□ -0.68
CHMP3-203ENST00000409225 KLK12Q9UKR0 248 aa10.79□□□□□ -0.68
CHMP3-203ENST00000409225 URGCP-MRPS24S4R325 110 aa10.79□□□□□ -0.68
CHMP3-203ENST00000409225 S100A5P33763 92 aa10.78□□□□□ -0.68
CHMP3-203ENST00000409225 UBE2L3P68036 154 aaKnown RBP10.78□□□□□ -0.68
CHMP3-203ENST00000409225 UBE2WQ96B02 151 aa10.78□□□□□ -0.68
CHMP3-203ENST00000409225 PGPEP1LA6NFU8 196 aa10.77□□□□□ -0.69
CHMP3-203ENST00000409225 LINC00694P0DN24 101 aa10.77□□□□□ -0.69
CHMP3-203ENST00000409225 BTCP35070 178 aa10.77□□□□□ -0.69
CHMP3-203ENST00000409225 ZNF506Q5JVG8 444 aa10.77□□□□□ -0.69
CHMP3-203ENST00000409225 TRIQKQ629K1 86 aa10.77□□□□□ -0.69
CHMP3-203ENST00000409225 Q6ZRU5 148 aa10.77□□□□□ -0.69
CHMP3-203ENST00000409225 TVP23CQ96ET8 276 aa10.77□□□□□ -0.69
CHMP3-203ENST00000409225 TREM1Q9NP99 234 aa10.77□□□□□ -0.69
CHMP3-203ENST00000409225 C14orf177Q52M58 125 aa10.76□□□□□ -0.69
CHMP3-203ENST00000409225 GOLT1AQ6ZVE7 132 aa10.76□□□□□ -0.69
CHMP3-203ENST00000409225 CYB561D1Q8N8Q1 229 aa10.76□□□□□ -0.69
CHMP3-203ENST00000409225 C2orf50Q96LR7 162 aa10.76□□□□□ -0.69
CHMP3-203ENST00000409225 NMES1Q9C002 83 aa10.76□□□□□ -0.69
CHMP3-203ENST00000409225 A0A087WWC5 75 aa10.75□□□□□ -0.69
CHMP3-203ENST00000409225 SEC11BP0C7V7 166 aa10.75□□□□□ -0.69
CHMP3-203ENST00000409225 RAB32Q13637 225 aa10.75□□□□□ -0.69
CHMP3-203ENST00000409225 NIT1Q86X76 327 aa10.75□□□□□ -0.69
CHMP3-203ENST00000409225 CMTM2Q8TAZ6 248 aa10.75□□□□□ -0.69
CHMP3-203ENST00000409225 C9orf85Q96MD7 179 aa10.75□□□□□ -0.69
CHMP3-203ENST00000409225 Q9UF83 564 aa10.75□□□□□ -0.69
CHMP3-203ENST00000409225 PGPA6NDG6 321 aa10.74□□□□□ -0.69
CHMP3-203ENST00000409225 OR2T35Q8NGX2 323 aa10.74□□□□□ -0.69
CHMP3-203ENST00000409225 SAMD10Q9BYL1 202 aa10.74□□□□□ -0.69
CHMP3-203ENST00000409225 OTORQ9NRC9 128 aa10.74□□□□□ -0.69
CHMP3-203ENST00000409225 C11orf21Q9P2W6 132 aa10.74□□□□□ -0.69
CHMP3-203ENST00000409225 CENPXA8MT69 81 aa10.73□□□□□ -0.69
CHMP3-203ENST00000409225 NHLH2Q02577 135 aa10.73□□□□□ -0.69
CHMP3-203ENST00000409225 OR5C1Q8NGR4 320 aa10.73□□□□□ -0.69
CHMP3-203ENST00000409225 PARLQ9H300 379 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms