RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 WISP1O95388 367 aa13.63□□□□□ -0.23
NRXN1-209ENST00000405581 PLXNA2O75051 1894 aa13.63□□□□□ -0.23
NRXN1-209ENST00000405581 C9orf118A6NHY6 69 aa13.63□□□□□ -0.23
NRXN1-209ENST00000405581 GTSF1LQ9H1H1 148 aa13.63□□□□□ -0.23
NRXN1-209ENST00000405581 U3KQE9 123 aa13.63□□□□□ -0.23
NRXN1-209ENST00000405581 IGLC2P0DOY2 106 aa13.63□□□□□ -0.23
NRXN1-209ENST00000405581 IGLC3P0DOY3 106 aa13.63□□□□□ -0.23
NRXN1-209ENST00000405581 LURAP1LQ8IV03 231 aa13.62□□□□□ -0.23
NRXN1-209ENST00000405581 MED13LQ71F56 2210 aa13.62□□□□□ -0.23
NRXN1-209ENST00000405581 NOP10Q9NPE3 64 aaKnown RBP13.62□□□□□ -0.23
NRXN1-209ENST00000405581 FAM208BQ5VWN6 2430 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 NPBQ8NG41 125 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 ZNF524Q96C55 264 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 NOTCH4Q99466 2003 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 MYLKQ15746 1914 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 FRMPD3Q5JV73 1810 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 IGKV2D-24A0A075B6R9 120 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 UBE2BP63146 152 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 HAMPP81172 84 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 NDUFS7O75251 213 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 C1orf43Q9BWL3 253 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 GTF3C1Q12789 2109 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 SIVA1O15304 175 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 C11orf53Q8IXP5 236 aa13.61□□□□□ -0.23
NRXN1-209ENST00000405581 DYNAPQ8N1N2 210 aa13.6□□□□□ -0.23
NRXN1-209ENST00000405581 HERV-K104P63124 156 aa13.6□□□□□ -0.23
NRXN1-209ENST00000405581 IGHV4-61A0A0C4DH41 118 aa13.6□□□□□ -0.23
NRXN1-209ENST00000405581 F8W1H4 67 aa13.6□□□□□ -0.23
NRXN1-209ENST00000405581 MORN5Q5VZ52 161 aa13.6□□□□□ -0.23
NRXN1-209ENST00000405581 LHBP01229 141 aa13.6□□□□□ -0.23
NRXN1-209ENST00000405581 HLA-DMBP28068 263 aa13.59□□□□□ -0.23
NRXN1-209ENST00000405581 MRPL23Q16540 153 aaKnown RBP13.59□□□□□ -0.23
NRXN1-209ENST00000405581 IGKV1OR2-108A0A075B7D4 117 aa13.59□□□□□ -0.23
NRXN1-209ENST00000405581 A0A096LPF7 62 aa13.59□□□□□ -0.23
NRXN1-209ENST00000405581 CFHR4Q92496 578 aa13.59□□□□□ -0.23
NRXN1-209ENST00000405581 RSPO3Q9BXY4 272 aaPredicted RBP13.59□□□□□ -0.23
NRXN1-209ENST00000405581 SPART-AS1P0CW21 52 aa13.59□□□□□ -0.23
NRXN1-209ENST00000405581 C16orf74Q96GX8 76 aa13.59□□□□□ -0.23
NRXN1-209ENST00000405581 SLC25A29Q8N8R3 303 aa13.58□□□□□ -0.23
NRXN1-209ENST00000405581 WIPF2Q8TF74 440 aaPredicted RBP13.58□□□□□ -0.23
NRXN1-209ENST00000405581 SHANK1Q9Y566 2161 aa13.58□□□□□ -0.24
NRXN1-209ENST00000405581 ATP5G1P05496 136 aa13.58□□□□□ -0.24
NRXN1-209ENST00000405581 PIFOQ8TCI5 191 aa13.58□□□□□ -0.24
NRXN1-209ENST00000405581 RNF138Q8WVD3 245 aa13.58□□□□□ -0.24
NRXN1-209ENST00000405581 GP9P14770 177 aa13.57□□□□□ -0.24
NRXN1-209ENST00000405581 C10orf91Q5T1B1 145 aa13.57□□□□□ -0.24
NRXN1-209ENST00000405581 IGHV7-81A0A0B4J1V7 117 aa13.57□□□□□ -0.24
NRXN1-209ENST00000405581 IL15RAQ13261 267 aa13.57□□□□□ -0.24
NRXN1-209ENST00000405581 Q6ZWC4 215 aa13.57□□□□□ -0.24
NRXN1-209ENST00000405581 PTPRQQ9UMZ3 2332 aa13.57□□□□□ -0.24
NRXN1-209ENST00000405581 F6UB75 175 aa13.57□□□□□ -0.24
NRXN1-209ENST00000405581 IGLL1P15814 213 aa13.57□□□□□ -0.24
NRXN1-209ENST00000405581 IGFBPL1Q8WX77 278 aa13.57□□□□□ -0.24
NRXN1-209ENST00000405581 KIAA1671Q9BY89 1806 aa13.57□□□□□ -0.24
NRXN1-209ENST00000405581 GRNP28799 593 aaKnown RBP13.56□□□□□ -0.24
NRXN1-209ENST00000405581 BVES-AS1Q5T3Y7 98 aa13.56□□□□□ -0.24
NRXN1-209ENST00000405581 C9orf153Q5TBE3 101 aa13.56□□□□□ -0.24
NRXN1-209ENST00000405581 CEND1Q8N111 149 aa13.56□□□□□ -0.24
NRXN1-209ENST00000405581 A0A0J9YY99 117 aa13.56□□□□□ -0.24
NRXN1-209ENST00000405581 GNRH2O43555 120 aa13.56□□□□□ -0.24
NRXN1-209ENST00000405581 EGR2P11161 476 aaPredicted RBP13.56□□□□□ -0.24
NRXN1-209ENST00000405581 CCL18P55774 89 aa13.56□□□□□ -0.24
NRXN1-209ENST00000405581 DAZAP2Q15038 168 aaPredicted RBP13.56□□□□□ -0.24
NRXN1-209ENST00000405581 C10orf105Q8TEF2 133 aa13.56□□□□□ -0.24
NRXN1-209ENST00000405581 ICOSQ9Y6W8 199 aa13.56□□□□□ -0.24
NRXN1-209ENST00000405581 XCL1P47992 114 aa13.56□□□□□ -0.24
NRXN1-209ENST00000405581 NUP210Q8TEM1 1887 aaPredicted RBP13.55□□□□□ -0.24
NRXN1-209ENST00000405581 HEATR5AQ86XA9 2040 aa13.55□□□□□ -0.24
NRXN1-209ENST00000405581 IGHV4-30-2A0A087WSY4 118 aa13.55□□□□□ -0.24
NRXN1-209ENST00000405581 LINC01545Q5VT33 79 aa13.55□□□□□ -0.24
NRXN1-209ENST00000405581 CARD19Q96LW7 228 aa13.55□□□□□ -0.24
NRXN1-209ENST00000405581 DKK4Q9UBT3 224 aa13.55□□□□□ -0.24
NRXN1-209ENST00000405581 IGLV11-55A0A075B6I3 123 aa13.55□□□□□ -0.24
NRXN1-209ENST00000405581 WT1P19544 449 aaPredicted RBP13.55□□□□□ -0.24
NRXN1-209ENST00000405581 TMEM89A2RUT3 159 aa13.54□□□□□ -0.24
NRXN1-209ENST00000405581 IGHG4P01861 327 aa13.54□□□□□ -0.24
NRXN1-209ENST00000405581 C17orf77Q96MU5 243 aa13.54□□□□□ -0.24
NRXN1-209ENST00000405581 AJUBAQ96IF1 538 aa13.54□□□□□ -0.24
NRXN1-209ENST00000405581 HELZP42694 1942 aaKnown RBP13.54□□□□□ -0.24
NRXN1-209ENST00000405581 CLPSL2Q6UWE3 100 aa13.54□□□□□ -0.24
NRXN1-209ENST00000405581 K7EP34 96 aa13.53□□□□□ -0.24
NRXN1-209ENST00000405581 IFITM1P13164 125 aa13.53□□□□□ -0.24
NRXN1-209ENST00000405581 ATP6V0E2Q8NHE4 81 aa13.53□□□□□ -0.24
NRXN1-209ENST00000405581 PRSS47A8MTI9 375 aa13.53□□□□□ -0.24
NRXN1-209ENST00000405581 I3L2K1 104 aa13.53□□□□□ -0.24
NRXN1-209ENST00000405581 ETDBQ3ZM63 59 aa13.53□□□□□ -0.24
NRXN1-209ENST00000405581 DOCK9Q9BZ29 2069 aa13.53□□□□□ -0.24
NRXN1-209ENST00000405581 ZGRF1Q86YA3 2104 aa13.53□□□□□ -0.24
NRXN1-209ENST00000405581 CITED1Q99966 193 aa13.53□□□□□ -0.24
NRXN1-209ENST00000405581 DOCK11Q5JSL3 2073 aa13.52□□□□□ -0.24
NRXN1-209ENST00000405581 PCNX2A6NKB5 2137 aa13.52□□□□□ -0.24
NRXN1-209ENST00000405581 CRYGCP07315 174 aa13.52□□□□□ -0.24
NRXN1-209ENST00000405581 DAZ2Q13117 558 aaKnown RBP13.52□□□□□ -0.24
NRXN1-209ENST00000405581 DAZ4Q86SG3 579 aaKnown RBP13.52□□□□□ -0.24
NRXN1-209ENST00000405581 DAZ3Q9NR90 486 aaKnown RBP13.52□□□□□ -0.24
NRXN1-209ENST00000405581 K7EIM0 57 aa13.52□□□□□ -0.24
NRXN1-209ENST00000405581 K7EMT4 169 aa13.52□□□□□ -0.24
NRXN1-209ENST00000405581 IGHV4-38-2P0DP08 117 aa13.52□□□□□ -0.24
NRXN1-209ENST00000405581 DEFB136Q30KP8 78 aa13.52□□□□□ -0.24
NRXN1-209ENST00000405581 Q6ZSR3 168 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms