RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 PANO1I0J062 215 aa7.68□□□□□ -1.18
SPTLC1P3-201ENST00000403408 IGLV2-11P01706 119 aa7.68□□□□□ -1.18
SPTLC1P3-201ENST00000403408 OR10J4P0C629 311 aa7.68□□□□□ -1.18
SPTLC1P3-201ENST00000403408 BTCP35070 178 aa7.68□□□□□ -1.18
SPTLC1P3-201ENST00000403408 AP3S2P59780 193 aa7.68□□□□□ -1.18
SPTLC1P3-201ENST00000403408 ASAH1Q13510 395 aa7.68□□□□□ -1.18
SPTLC1P3-201ENST00000403408 C12orf45Q8N5I9 185 aaPredicted RBP7.68□□□□□ -1.18
SPTLC1P3-201ENST00000403408 AAMDCQ9H7C9 122 aa7.68□□□□□ -1.18
SPTLC1P3-201ENST00000403408 BAXQ07812 192 aa7.67□□□□□ -1.18
SPTLC1P3-201ENST00000403408 RAB31Q13636 194 aa7.67□□□□□ -1.18
SPTLC1P3-201ENST00000403408 FAM159AQ6UWV7 190 aa7.67□□□□□ -1.18
SPTLC1P3-201ENST00000403408 ATP6V0E2Q8NHE4 81 aa7.67□□□□□ -1.18
SPTLC1P3-201ENST00000403408 GPN1Q9HCN4 374 aaPredicted RBP7.67□□□□□ -1.18
SPTLC1P3-201ENST00000403408 C11orf21Q9P2W6 132 aa7.67□□□□□ -1.18
SPTLC1P3-201ENST00000403408 LSM5Q9Y4Y9 91 aaKnown RBP7.67□□□□□ -1.18
SPTLC1P3-201ENST00000403408 TRAV8-3A0A0A6YYJ7 113 aa7.66□□□□□ -1.18
SPTLC1P3-201ENST00000403408 TRBV6-4A0A1B0GX49 114 aa7.66□□□□□ -1.18
SPTLC1P3-201ENST00000403408 FBLL1A6NHQ2 334 aaKnown RBP7.66□□□□□ -1.18
SPTLC1P3-201ENST00000403408 FGF7P21781 194 aa7.66□□□□□ -1.18
SPTLC1P3-201ENST00000403408 BCAP31P51572 246 aa7.66□□□□□ -1.18
SPTLC1P3-201ENST00000403408 Q8N976 141 aa7.66□□□□□ -1.18
SPTLC1P3-201ENST00000403408 MITD1Q8WV92 249 aa7.66□□□□□ -1.18
SPTLC1P3-201ENST00000403408 OR51M1Q9H341 326 aa7.66□□□□□ -1.18
SPTLC1P3-201ENST00000403408 RBAKDNA6NC62 111 aa7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 DIRC3C9JPN6 131 aa7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 F6UZH7 168 aa7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 H3BMQ9 156 aa7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 EIF3GO75821 320 aaKnown RBP eCLIP7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 RANP62826 216 aaKnown RBP7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 RHOHQ15669 191 aa7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 ACOT6Q3I5F7 207 aaPredicted RBP7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 TMEM252Q8N6L7 170 aa7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 PRADC1Q9BSG0 188 aa7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 PAXXQ9BUH6 204 aa7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 NPCDR1Q9BY65 106 aa7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 C20orf85Q9H1P6 137 aa7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.65□□□□□ -1.18
SPTLC1P3-201ENST00000403408 MUC2Q02817 5179 aa7.64□□□□□ -1.19
SPTLC1P3-201ENST00000403408 C5orf51A6NDU8 294 aa7.64□□□□□ -1.19
SPTLC1P3-201ENST00000403408 PGPEP1LA6NFU8 196 aa7.64□□□□□ -1.19
SPTLC1P3-201ENST00000403408 L7N2F9 121 aa7.64□□□□□ -1.19
SPTLC1P3-201ENST00000403408 VAMP2P63027 116 aa7.64□□□□□ -1.19
SPTLC1P3-201ENST00000403408 IL15RAQ13261 267 aa7.64□□□□□ -1.19
SPTLC1P3-201ENST00000403408 ZNF876PQ49A33 203 aa7.64□□□□□ -1.19
SPTLC1P3-201ENST00000403408 DEDD2Q8WXF8 326 aa7.64□□□□□ -1.19
SPTLC1P3-201ENST00000403408 IGKV2D-24A0A075B6R9 120 aa7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 GAGE12JA6NER3 117 aa7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 SULT1A1P50225 295 aa7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 ZNF80P51504 273 aaPredicted RBP7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 TMBIM6P55061 237 aa7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 GAGE1Q13065 139 aa7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 GAGE4Q13068 117 aa7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 GAGE5Q13069 117 aa7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 GAGE13Q4V321 117 aa7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 THAP6Q8TBB0 222 aa7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 SAMD10Q9BYL1 202 aa7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 MRPS26Q9BYN8 205 aaKnown RBP7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 LYRM2Q9NU23 88 aaPredicted RBP7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 LENEPQ9Y5L5 61 aa7.63□□□□□ -1.19
SPTLC1P3-201ENST00000403408 TRAV8-1A0A0A6YYK1 113 aa7.62□□□□□ -1.19
SPTLC1P3-201ENST00000403408 GGTLC3B5MD39 225 aa7.62□□□□□ -1.19
SPTLC1P3-201ENST00000403408 S100A11P31949 105 aa7.62□□□□□ -1.19
SPTLC1P3-201ENST00000403408 ZNF506Q5JVG8 444 aa7.62□□□□□ -1.19
SPTLC1P3-201ENST00000403408 NIT1Q86X76 327 aa7.62□□□□□ -1.19
SPTLC1P3-201ENST00000403408 TMEM75Q8N9X5 138 aa7.62□□□□□ -1.19
SPTLC1P3-201ENST00000403408 C9orf85Q96MD7 179 aa7.62□□□□□ -1.19
SPTLC1P3-201ENST00000403408 SDHCQ99643 169 aaPredicted RBP7.62□□□□□ -1.19
SPTLC1P3-201ENST00000403408 KLK12Q9UKR0 248 aa7.62□□□□□ -1.19
SPTLC1P3-201ENST00000403408 RPH3ALQ9UNE2 315 aa7.62□□□□□ -1.19
SPTLC1P3-201ENST00000403408 INPP1P49441 399 aa7.61□□□□□ -1.19
SPTLC1P3-201ENST00000403408 ATRAIDQ6UW56 229 aa7.61□□□□□ -1.19
SPTLC1P3-201ENST00000403408 Q6ZRU5 148 aa7.61□□□□□ -1.19
SPTLC1P3-201ENST00000403408 C14orf178Q8N769 122 aaPredicted RBP7.61□□□□□ -1.19
SPTLC1P3-201ENST00000403408 TMED6Q8WW62 240 aa7.61□□□□□ -1.19
SPTLC1P3-201ENST00000403408 BCL7BQ9BQE9 202 aa7.61□□□□□ -1.19
SPTLC1P3-201ENST00000403408 JPT2Q9H910 190 aa7.61□□□□□ -1.19
SPTLC1P3-201ENST00000403408 TRAV21A0A0B4J279 112 aa7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 FAM25EA8MYX2 175 aa7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 RNASE3P12724 160 aaKnown RBP7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 CSN1S1P47710 185 aa7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 NHLH2Q02577 135 aa7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 RAB32Q13637 225 aa7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 TOR2AQ5JU69 321 aa7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 UFSP1Q6NVU6 142 aa7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 ASB13Q8WXK3 278 aa7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 UBE2WQ96B02 151 aa7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 HYLS1Q96M11 299 aa7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 LINC00479Q96M42 142 aa7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 SDF2L1Q9HCN8 221 aa7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 COX11Q9Y6N1 276 aa7.6□□□□□ -1.19
SPTLC1P3-201ENST00000403408 MGST1P10620 155 aaKnown RBP7.59□□□□□ -1.19
SPTLC1P3-201ENST00000403408 GOLT1AQ6ZVE7 132 aa7.59□□□□□ -1.19
SPTLC1P3-201ENST00000403408 CYB561D1Q8N8Q1 229 aa7.59□□□□□ -1.19
SPTLC1P3-201ENST00000403408 SGK494Q96LW2 274 aa7.59□□□□□ -1.19
SPTLC1P3-201ENST00000403408 SEC22CQ9BRL7 303 aa7.59□□□□□ -1.19
SPTLC1P3-201ENST00000403408 PARLQ9H300 379 aa7.59□□□□□ -1.19
SPTLC1P3-201ENST00000403408 NAP1L6A6NFF2 107 aa7.58□□□□□ -1.2
SPTLC1P3-201ENST00000403408 OR7C2O60412 319 aa7.58□□□□□ -1.2
SPTLC1P3-201ENST00000403408 CIDEAO60543 219 aa7.58□□□□□ -1.2
SPTLC1P3-201ENST00000403408 PRSS1P07477 247 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms