RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SRIP30626 198 aa19.03■□□□□ 0.64
CPNE1-205ENST00000401607 LEPP41159 167 aa19.03■□□□□ 0.64
CPNE1-205ENST00000401607 S100A8P05109 93 aa19.02■□□□□ 0.64
CPNE1-205ENST00000401607 AMTNQ6UX39 209 aa19.02■□□□□ 0.64
CPNE1-205ENST00000401607 CNFNQ9BYD5 112 aa19.02■□□□□ 0.64
CPNE1-205ENST00000401607 NAGKQ9UJ70 344 aa19.02■□□□□ 0.64
CPNE1-205ENST00000401607 F8P00451 2351 aa19.01■□□□□ 0.63
CPNE1-205ENST00000401607 SSTP61278 116 aa19.01■□□□□ 0.63
CPNE1-205ENST00000401607 ZNF124Q15973 351 aa19.01■□□□□ 0.63
CPNE1-205ENST00000401607 SETD2Q9BYW2 2564 aaPredicted RBP19.01■□□□□ 0.63
CPNE1-205ENST00000401607 C2CD3Q4AC94 2353 aa19.01■□□□□ 0.63
CPNE1-205ENST00000401607 Q0VG73 95 aa19.01■□□□□ 0.63
CPNE1-205ENST00000401607 ANXA2RQ3ZCQ2 193 aa19.01■□□□□ 0.63
CPNE1-205ENST00000401607 A8MTW9 85 aa19■□□□□ 0.63
CPNE1-205ENST00000401607 F2Z2F3 143 aa19■□□□□ 0.63
CPNE1-205ENST00000401607 SAP30O75446 220 aa19■□□□□ 0.63
CPNE1-205ENST00000401607 HLA-DRB4P13762 266 aa19■□□□□ 0.63
CPNE1-205ENST00000401607 ZNF493Q6ZR52 646 aa19■□□□□ 0.63
CPNE1-205ENST00000401607 TMEM256Q8N2U0 113 aa19■□□□□ 0.63
CPNE1-205ENST00000401607 HLA-DRB4X5D2U9 266 aa19■□□□□ 0.63
CPNE1-205ENST00000401607 C7orf71A4D174 169 aa18.98■□□□□ 0.63
CPNE1-205ENST00000401607 M0R2Z0 102 aa18.98■□□□□ 0.63
CPNE1-205ENST00000401607 NTF3P20783 257 aa18.98■□□□□ 0.63
CPNE1-205ENST00000401607 LINC00310P59036 64 aa18.98■□□□□ 0.63
CPNE1-205ENST00000401607 ALKBH7Q9BT30 221 aaPredicted RBP18.98■□□□□ 0.63
CPNE1-205ENST00000401607 LOC102724200A0A096LPH7 203 aaPredicted RBP18.98■□□□□ 0.63
CPNE1-205ENST00000401607 H3BMM0 161 aa18.98■□□□□ 0.63
CPNE1-205ENST00000401607 CDKN1BP46527 198 aa18.98■□□□□ 0.63
CPNE1-205ENST00000401607 SPINK13Q1W4C9 94 aa18.98■□□□□ 0.63
CPNE1-205ENST00000401607 AGRNO00468 2067 aa18.97■□□□□ 0.63
CPNE1-205ENST00000401607 TRAV12-3A0A0B4J271 114 aa18.97■□□□□ 0.63
CPNE1-205ENST00000401607 SNAI2O43623 268 aa18.97■□□□□ 0.63
CPNE1-205ENST00000401607 NUPR1O60356 82 aa18.97■□□□□ 0.63
CPNE1-205ENST00000401607 ZNF324O75467 553 aaPredicted RBP18.97■□□□□ 0.63
CPNE1-205ENST00000401607 TWIST1Q15672 202 aa18.97■□□□□ 0.63
CPNE1-205ENST00000401607 ODF3L2Q3SX64 289 aa18.97■□□□□ 0.63
CPNE1-205ENST00000401607 OR10J3Q5JRS4 329 aa18.97■□□□□ 0.63
CPNE1-205ENST00000401607 BAHCC1Q9P281 2608 aa18.97■□□□□ 0.63
CPNE1-205ENST00000401607 WNK1Q9H4A3 2382 aa18.96■□□□□ 0.63
CPNE1-205ENST00000401607 TRAV12-2A0A075B6T6 113 aa18.96■□□□□ 0.63
CPNE1-205ENST00000401607 IGLV1-51P01701 117 aa18.96■□□□□ 0.63
CPNE1-205ENST00000401607 OR5AL1P0C617 328 aa18.96■□□□□ 0.63
CPNE1-205ENST00000401607 TSPOP30536 169 aa18.96■□□□□ 0.63
CPNE1-205ENST00000401607 LINC00482Q8N8I6 264 aa18.96■□□□□ 0.63
CPNE1-205ENST00000401607 MSRB1Q9NZV6 116 aa18.96■□□□□ 0.63
CPNE1-205ENST00000401607 RBMY1BA6NDE4 496 aaKnown RBP18.96■□□□□ 0.63
CPNE1-205ENST00000401607 RBMY1EA6NEQ0 496 aaKnown RBP18.96■□□□□ 0.63
CPNE1-205ENST00000401607 RBMY1DP0C7P1 496 aaKnown RBP18.96■□□□□ 0.63
CPNE1-205ENST00000401607 H3BVH4 76 aa18.95■□□□□ 0.62
CPNE1-205ENST00000401607 PF4P02776 101 aa18.95■□□□□ 0.62
CPNE1-205ENST00000401607 S100A2P29034 98 aa18.95■□□□□ 0.62
CPNE1-205ENST00000401607 OR10AG1Q8NH19 301 aa18.95■□□□□ 0.62
CPNE1-205ENST00000401607 C18orf32Q8TCD1 76 aa18.95■□□□□ 0.62
CPNE1-205ENST00000401607 HIST1H2BLQ99880 126 aa18.95■□□□□ 0.62
CPNE1-205ENST00000401607 SORL1Q92673 2214 aa18.95■□□□□ 0.62
CPNE1-205ENST00000401607 BAGE3Q86Y29 109 aa18.94■□□□□ 0.62
CPNE1-205ENST00000401607 GNRH2O43555 120 aa18.93■□□□□ 0.62
CPNE1-205ENST00000401607 SERF1AO75920 110 aa18.93■□□□□ 0.62
CPNE1-205ENST00000401607 AMBPP02760 352 aa18.93■□□□□ 0.62
CPNE1-205ENST00000401607 FABP4P15090 132 aa18.93■□□□□ 0.62
CPNE1-205ENST00000401607 ASIPP42127 132 aa18.93■□□□□ 0.62
CPNE1-205ENST00000401607 IQCJQ1A5X6 159 aa18.93■□□□□ 0.62
CPNE1-205ENST00000401607 CITED1Q99966 193 aa18.93■□□□□ 0.62
CPNE1-205ENST00000401607 DNLZQ5SXM8 178 aa18.92■□□□□ 0.62
CPNE1-205ENST00000401607 FAM104BQ5XKR9 115 aa18.92■□□□□ 0.62
CPNE1-205ENST00000401607 AMN1Q8IY45 258 aa18.92■□□□□ 0.62
CPNE1-205ENST00000401607 IGHV4-4A0A075B6R2 117 aa18.91■□□□□ 0.62
CPNE1-205ENST00000401607 ESDP10768 282 aa18.91■□□□□ 0.62
CPNE1-205ENST00000401607 FXYD7P58549 80 aa18.91■□□□□ 0.62
CPNE1-205ENST00000401607 FAM159AQ6UWV7 190 aa18.91■□□□□ 0.62
CPNE1-205ENST00000401607 OR2K2Q8NGT1 345 aa18.91■□□□□ 0.62
CPNE1-205ENST00000401607 RCHY1Q96PM5 261 aa18.91■□□□□ 0.62
CPNE1-205ENST00000401607 MED14OSP0DP75 135 aa18.91■□□□□ 0.62
CPNE1-205ENST00000401607 TMEM191AQ9H0A3 160 aa18.91■□□□□ 0.62
CPNE1-205ENST00000401607 CRXO43186 299 aaPredicted RBP18.9■□□□□ 0.62
CPNE1-205ENST00000401607 RNASE3P12724 160 aaKnown RBP18.9■□□□□ 0.62
CPNE1-205ENST00000401607 TDRG1Q3Y452 100 aa18.9■□□□□ 0.62
CPNE1-205ENST00000401607 TIMM8BQ9Y5J9 83 aaPredicted RBP18.9■□□□□ 0.62
CPNE1-205ENST00000401607 S100A4P26447 101 aaKnown RBP18.89■□□□□ 0.61
CPNE1-205ENST00000401607 CACNG7P62955 275 aa18.89■□□□□ 0.61
CPNE1-205ENST00000401607 DMRTA1Q5VZB9 504 aa18.89■□□□□ 0.61
CPNE1-205ENST00000401607 KCNS1Q96KK3 526 aa18.89■□□□□ 0.61
CPNE1-205ENST00000401607 SCRT2Q9NQ03 307 aa18.89■□□□□ 0.61
CPNE1-205ENST00000401607 OR11H12B2RN74 326 aa18.88■□□□□ 0.61
CPNE1-205ENST00000401607 OR10D4PQ8NGN7 298 aa18.88■□□□□ 0.61
CPNE1-205ENST00000401607 RBMY1A1P0DJD3 496 aaKnown RBP18.88■□□□□ 0.61
CPNE1-205ENST00000401607 RBMY1CP0DJD4 496 aa18.88■□□□□ 0.61
CPNE1-205ENST00000401607 RBMY1FQ15415 496 aaKnown RBP18.88■□□□□ 0.61
CPNE1-205ENST00000401607 SPRY2O43597 315 aa18.87■□□□□ 0.61
CPNE1-205ENST00000401607 SPANXN1Q5VSR9 72 aa18.87■□□□□ 0.61
CPNE1-205ENST00000401607 PACRGQ96M98 296 aaPredicted RBP18.87■□□□□ 0.61
CPNE1-205ENST00000401607 BEAN1Q3B7T3 259 aa18.86■□□□□ 0.61
CPNE1-205ENST00000401607 MRPL51Q4U2R6 128 aaKnown RBP18.86■□□□□ 0.61
CPNE1-205ENST00000401607 LINC00518Q8N0U6 118 aa18.86■□□□□ 0.61
CPNE1-205ENST00000401607 TMEM18Q96B42 140 aa18.86■□□□□ 0.61
CPNE1-205ENST00000401607 RNF185Q96GF1 192 aa18.86■□□□□ 0.61
CPNE1-205ENST00000401607 CLUHP3Q96NS8 147 aa18.86■□□□□ 0.61
CPNE1-205ENST00000401607 SPATA3Q8NHX4 192 aa18.86■□□□□ 0.61
CPNE1-205ENST00000401607 U3KQK5 164 aa18.86■□□□□ 0.61
CPNE1-205ENST00000401607 IGHV1OR15-1A0A075B7D0 117 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms