RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 Q6ZNX1 250 aa11.76□□□□□ -0.53
EXOSC3-202ENST00000396521 OR5C1Q8NGR4 320 aa11.76□□□□□ -0.53
EXOSC3-202ENST00000396521 FAM167A-AS1Q96KT0 104 aa11.76□□□□□ -0.53
EXOSC3-202ENST00000396521 NPCDR1Q9BY65 106 aa11.76□□□□□ -0.53
EXOSC3-202ENST00000396521 TRAV8-6A0A0B4J262 113 aa11.75□□□□□ -0.53
EXOSC3-202ENST00000396521 PFN1P07737 140 aaKnown RBP11.75□□□□□ -0.53
EXOSC3-202ENST00000396521 TDRG1Q3Y452 100 aa11.75□□□□□ -0.53
EXOSC3-202ENST00000396521 Q8N814 137 aa11.75□□□□□ -0.53
EXOSC3-202ENST00000396521 OR4C5Q8NGB2 326 aa11.75□□□□□ -0.53
EXOSC3-202ENST00000396521 TMED6Q8WW62 240 aa11.75□□□□□ -0.53
EXOSC3-202ENST00000396521 PAXXQ9BUH6 204 aa11.75□□□□□ -0.53
EXOSC3-202ENST00000396521 HSPB11Q9Y547 144 aa11.75□□□□□ -0.53
EXOSC3-202ENST00000396521 M0R2P5 195 aa11.74□□□□□ -0.53
EXOSC3-202ENST00000396521 CIDEAO60543 219 aa11.74□□□□□ -0.53
EXOSC3-202ENST00000396521 NHLH2Q02577 135 aa11.74□□□□□ -0.53
EXOSC3-202ENST00000396521 TMEM183BQ1AE95 376 aa11.74□□□□□ -0.53
EXOSC3-202ENST00000396521 MUC21Q5SSG8 566 aa11.74□□□□□ -0.53
EXOSC3-202ENST00000396521 Q6ZQT7 251 aa11.74□□□□□ -0.53
EXOSC3-202ENST00000396521 TMEM183AQ8IXX5 376 aa11.74□□□□□ -0.53
EXOSC3-202ENST00000396521 PPT1P50897 306 aa11.73□□□□□ -0.53
EXOSC3-202ENST00000396521 NHLRC2Q8NBF2 726 aa11.73□□□□□ -0.53
EXOSC3-202ENST00000396521 INO80EQ8NBZ0 244 aaPredicted RBP11.73□□□□□ -0.53
EXOSC3-202ENST00000396521 Q8TAT8 98 aa11.73□□□□□ -0.53
EXOSC3-202ENST00000396521 FXYD5Q96DB9 178 aa11.73□□□□□ -0.53
EXOSC3-202ENST00000396521 ATP5SQ99766 215 aa11.73□□□□□ -0.53
EXOSC3-202ENST00000396521 TM2D2Q9BX73 214 aa11.73□□□□□ -0.53
EXOSC3-202ENST00000396521 SMIM3Q9BZL3 60 aa11.73□□□□□ -0.53
EXOSC3-202ENST00000396521 SH3BGRL3Q9H299 93 aa11.73□□□□□ -0.53
EXOSC3-202ENST00000396521 KRTAP29-1A8MX34 341 aaPredicted RBP11.72□□□□□ -0.53
EXOSC3-202ENST00000396521 LAGE3Q14657 143 aa11.72□□□□□ -0.53
EXOSC3-202ENST00000396521 GCSAMLQ5JQS6 135 aa11.72□□□□□ -0.53
EXOSC3-202ENST00000396521 MIR17HGQ75NE6 70 aa11.72□□□□□ -0.53
EXOSC3-202ENST00000396521 SMLR1H3BR10 107 aa11.71□□□□□ -0.53
EXOSC3-202ENST00000396521 RANP62826 216 aaKnown RBP11.71□□□□□ -0.53
EXOSC3-202ENST00000396521 Q5BKY6 102 aa11.71□□□□□ -0.53
EXOSC3-202ENST00000396521 DEFB104AQ8WTQ1 72 aa11.71□□□□□ -0.53
EXOSC3-202ENST00000396521 OR7C2O60412 319 aa11.7□□□□□ -0.54
EXOSC3-202ENST00000396521 OR10J4P0C629 311 aa11.7□□□□□ -0.54
EXOSC3-202ENST00000396521 GATA1P15976 413 aaPredicted RBP11.7□□□□□ -0.54
EXOSC3-202ENST00000396521 ARL6IP6Q8N6S5 226 aa11.7□□□□□ -0.54
EXOSC3-202ENST00000396521 KCNS1Q96KK3 526 aa11.7□□□□□ -0.54
EXOSC3-202ENST00000396521 AQP10Q96PS8 301 aa11.7□□□□□ -0.54
EXOSC3-202ENST00000396521 C17orf112F2Z3M2 114 aa11.69□□□□□ -0.54
EXOSC3-202ENST00000396521 ARPC5O15511 151 aa11.69□□□□□ -0.54
EXOSC3-202ENST00000396521 OR10J3Q5JRS4 329 aa11.69□□□□□ -0.54
EXOSC3-202ENST00000396521 SERTAD4-AS1Q5TG53 156 aa11.69□□□□□ -0.54
EXOSC3-202ENST00000396521 AKAP14Q86UN6 197 aa11.69□□□□□ -0.54
EXOSC3-202ENST00000396521 SCGB1C1Q8TD33 95 aa11.69□□□□□ -0.54
EXOSC3-202ENST00000396521 PHYHIPLQ96FC7 376 aa11.69□□□□□ -0.54
EXOSC3-202ENST00000396521 PRADC1Q9BSG0 188 aa11.69□□□□□ -0.54
EXOSC3-202ENST00000396521 TNFSF18Q9UNG2 199 aa11.69□□□□□ -0.54
EXOSC3-202ENST00000396521 TRAV21A0A0B4J279 112 aa11.68□□□□□ -0.54
EXOSC3-202ENST00000396521 TRBV6-4A0A1B0GX49 114 aa11.68□□□□□ -0.54
EXOSC3-202ENST00000396521 DIRC3C9JPN6 131 aa11.68□□□□□ -0.54
EXOSC3-202ENST00000396521 TAS2R45P59539 299 aa11.68□□□□□ -0.54
EXOSC3-202ENST00000396521 HAMPP81172 84 aa11.68□□□□□ -0.54
EXOSC3-202ENST00000396521 FAM74A1Q5RGS3 127 aa11.68□□□□□ -0.54
EXOSC3-202ENST00000396521 IGHV3-16A0A0C4DH30 117 aa11.67□□□□□ -0.54
EXOSC3-202ENST00000396521 FBLL1A6NHQ2 334 aaKnown RBP11.67□□□□□ -0.54
EXOSC3-202ENST00000396521 G3V3Q6 166 aa11.67□□□□□ -0.54
EXOSC3-202ENST00000396521 UBE2L3P68036 154 aaKnown RBP11.67□□□□□ -0.54
EXOSC3-202ENST00000396521 RHOHQ15669 191 aa11.67□□□□□ -0.54
EXOSC3-202ENST00000396521 LELP1Q5T871 98 aa11.67□□□□□ -0.54
EXOSC3-202ENST00000396521 Q6ZSA8 131 aa11.67□□□□□ -0.54
EXOSC3-202ENST00000396521 WDR61Q9GZS3 305 aaKnown RBP11.67□□□□□ -0.54
EXOSC3-202ENST00000396521 Q9HAA7 133 aa11.67□□□□□ -0.54
EXOSC3-202ENST00000396521 SDF2L1Q9HCN8 221 aa11.67□□□□□ -0.54
EXOSC3-202ENST00000396521 FAM30AQ9NZY2 134 aa11.67□□□□□ -0.54
EXOSC3-202ENST00000396521 NAGKQ9UJ70 344 aa11.67□□□□□ -0.54
EXOSC3-202ENST00000396521 RNF222A6NCQ9 220 aa11.66□□□□□ -0.54
EXOSC3-202ENST00000396521 KHDC3LQ587J8 217 aa11.66□□□□□ -0.54
EXOSC3-202ENST00000396521 SYT8Q8NBV8 401 aa11.66□□□□□ -0.54
EXOSC3-202ENST00000396521 CMTM2Q8TAZ6 248 aa11.66□□□□□ -0.54
EXOSC3-202ENST00000396521 TRAV8-3A0A0A6YYJ7 113 aa11.65□□□□□ -0.54
EXOSC3-202ENST00000396521 LOC100131303A0A0U1RQF7 123 aa11.65□□□□□ -0.54
EXOSC3-202ENST00000396521 SLC25A29Q8N8R3 303 aa11.65□□□□□ -0.54
EXOSC3-202ENST00000396521 GTSF1LQ9H1H1 148 aa11.65□□□□□ -0.54
EXOSC3-202ENST00000396521 OTORQ9NRC9 128 aa11.65□□□□□ -0.54
EXOSC3-202ENST00000396521 COX11Q9Y6N1 276 aa11.65□□□□□ -0.54
EXOSC3-202ENST00000396521 BORCS7-ASMTA0A0B4J1R7 106 aa11.64□□□□□ -0.55
EXOSC3-202ENST00000396521 GNRH2O43555 120 aa11.64□□□□□ -0.55
EXOSC3-202ENST00000396521 TOR2AQ5JU69 321 aa11.64□□□□□ -0.55
EXOSC3-202ENST00000396521 TCTE3Q8IZS6 198 aa11.64□□□□□ -0.55
EXOSC3-202ENST00000396521 LINC00528Q8N1L1 170 aa11.64□□□□□ -0.55
EXOSC3-202ENST00000396521 WFDC1Q9HC57 220 aa11.64□□□□□ -0.55
EXOSC3-202ENST00000396521 A0A1B0GVG6 124 aa11.63□□□□□ -0.55
EXOSC3-202ENST00000396521 ZNF345Q14585 488 aa11.63□□□□□ -0.55
EXOSC3-202ENST00000396521 ZNF876PQ49A33 203 aa11.63□□□□□ -0.55
EXOSC3-202ENST00000396521 HSD17B11Q8NBQ5 300 aa11.63□□□□□ -0.55
EXOSC3-202ENST00000396521 HYLS1Q96M11 299 aa11.63□□□□□ -0.55
EXOSC3-202ENST00000396521 TREM1Q9NP99 234 aa11.63□□□□□ -0.55
EXOSC3-202ENST00000396521 TYMSP04818 313 aa11.62□□□□□ -0.55
EXOSC3-202ENST00000396521 MGST1P10620 155 aaKnown RBP11.62□□□□□ -0.55
EXOSC3-202ENST00000396521 ATP6V0E2Q8NHE4 81 aa11.62□□□□□ -0.55
EXOSC3-202ENST00000396521 PTH2Q96A98 100 aa11.62□□□□□ -0.55
EXOSC3-202ENST00000396521 KANTRA0A1W2PQU2 76 aa11.61□□□□□ -0.55
EXOSC3-202ENST00000396521 PGPA6NDG6 321 aa11.61□□□□□ -0.55
EXOSC3-202ENST00000396521 HMSDA8MTL9 139 aa11.61□□□□□ -0.55
EXOSC3-202ENST00000396521 TAAR5O14804 337 aa11.61□□□□□ -0.55
EXOSC3-202ENST00000396521 RS1O15537 224 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 173.8 ms