RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SHBGP04278 402 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 IL4P05112 153 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 UQCRHP07919 91 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 COX6A1P12074 109 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 COL8A2P25067 703 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 FXYD2P54710 66 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 ZNF90Q03938 601 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 SS18Q15532 418 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 ZNF79Q15937 498 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 LYPD6Q86Y78 171 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 Q8IYB0 196 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 Q8NAQ8 132 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 Q9H521 79 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 METTL1Q9UBP6 276 aaKnown RBP3.09□□□□□ -1.92
GABPB1-204ENST00000396464 MINOS1-NBL1R4GNA1 71 aa3.09□□□□□ -1.92
GABPB1-204ENST00000396464 ZFC3H1O60293 1989 aaKnown RBP3.08□□□□□ -1.92
GABPB1-204ENST00000396464 MYH9P35579 1960 aaKnown RBP3.08□□□□□ -1.92
GABPB1-204ENST00000396464 DOCK1Q14185 1865 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 COL4A5P29400 1685 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 TRBV10-2A0A0K0K1G8 114 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 H7C2G1 150 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 CLPSP04118 112 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 CTSDP07339 412 aaPredicted RBP3.08□□□□□ -1.92
GABPB1-204ENST00000396464 IFITM1P13164 125 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 PEBP1P30086 187 aaKnown RBP3.08□□□□□ -1.92
GABPB1-204ENST00000396464 LPAL2Q16609 132 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 Q56UQ5 140 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 PABPC1L2AQ5JQF8 200 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 FAM27BQ5VT28 67 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 Q6ZQT0 140 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 Q6ZR54 194 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 OR5AS1Q8N127 324 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 TTC9CQ8N5M4 171 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 CLEC2BQ92478 149 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 RETNLBQ9BQ08 111 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 NABP2Q9BQ15 211 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 SCP2D1Q9UJQ7 156 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 PTPRSQ13332 1948 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 WDR90Q96KV7 1748 aa3.08□□□□□ -1.92
GABPB1-204ENST00000396464 NYNRINQ9P2P1 1898 aaKnown RBP3.07□□□□□ -1.92
GABPB1-204ENST00000396464 MYH4Q9Y623 1939 aa3.07□□□□□ -1.92
GABPB1-204ENST00000396464 A0A1B0GU33 70 aa3.07□□□□□ -1.92
GABPB1-204ENST00000396464 GNRH2O43555 120 aa3.07□□□□□ -1.92
GABPB1-204ENST00000396464 RBP4P02753 201 aa3.07□□□□□ -1.92
GABPB1-204ENST00000396464 CIRBPQ14011 172 aaKnown RBP3.07□□□□□ -1.92
GABPB1-204ENST00000396464 MIC13Q5XKP0 118 aa3.07□□□□□ -1.92
GABPB1-204ENST00000396464 FOXI2Q6ZQN5 318 aa3.07□□□□□ -1.92
GABPB1-204ENST00000396464 COPS9Q8WXC6 57 aa3.07□□□□□ -1.92
GABPB1-204ENST00000396464 V9GYS6 101 aa3.07□□□□□ -1.92
GABPB1-204ENST00000396464 DDX60LQ5H9U9 1706 aaKnown RBP3.07□□□□□ -1.92
GABPB1-204ENST00000396464 MYO10Q9HD67 2058 aa3.07□□□□□ -1.92
GABPB1-204ENST00000396464 SRCAPQ6ZRS2 3230 aa3.07□□□□□ -1.92
GABPB1-204ENST00000396464 THADAQ6YHU6 1953 aa3.06□□□□□ -1.92
GABPB1-204ENST00000396464 KIF26AQ9ULI4 1882 aaPredicted RBP3.06□□□□□ -1.92
GABPB1-204ENST00000396464 B4DSR2 109 aa3.06□□□□□ -1.92
GABPB1-204ENST00000396464 TRACP01848 142 aa3.06□□□□□ -1.92
GABPB1-204ENST00000396464 PMP2P02689 132 aa3.06□□□□□ -1.92
GABPB1-204ENST00000396464 ZNF14P17017 642 aaPredicted RBP3.06□□□□□ -1.92
GABPB1-204ENST00000396464 C9orf153Q5TBE3 101 aa3.06□□□□□ -1.92
GABPB1-204ENST00000396464 SVBPQ8N300 66 aa3.06□□□□□ -1.92
GABPB1-204ENST00000396464 POP5Q969H6 163 aaKnown RBP3.06□□□□□ -1.92
GABPB1-204ENST00000396464 NHP2Q9NX24 153 aaKnown RBP3.06□□□□□ -1.92
GABPB1-204ENST00000396464 TAS2R4Q9NYW5 299 aa3.06□□□□□ -1.92
GABPB1-204ENST00000396464 TPRKBQ9Y3C4 175 aa3.06□□□□□ -1.92
GABPB1-204ENST00000396464 SERP1Q9Y6X1 66 aa3.06□□□□□ -1.92
GABPB1-204ENST00000396464 S4R3C0 116 aa3.06□□□□□ -1.92
GABPB1-204ENST00000396464 TRPM7Q96QT4 1865 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 PAPPA2Q9BXP8 1791 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 GREB1Q4ZG55 1949 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 IGHV3OR16-8A0A075B7F1 116 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 TRAV3A0A0B4J244 114 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 LOC107986453A0A1B0GWG9 222 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 APOC4-APOC2K7ER74 178 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 M0R2P5 195 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 LYRM1O43325 122 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 CPSF4O95639 269 aaKnown RBP3.05□□□□□ -1.92
GABPB1-204ENST00000396464 IGLV1-51P01701 117 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 APOC2P02655 101 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 SAA1P0DJI8 122 aaPredicted RBP3.05□□□□□ -1.92
GABPB1-204ENST00000396464 NDPQ00604 133 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 EIF4EBP1Q13541 118 aaPredicted RBP3.05□□□□□ -1.92
GABPB1-204ENST00000396464 ESRGQ1W209 222 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 OR5AK2Q8NH90 309 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 OTOSQ8NHW6 89 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 LSM10Q969L4 123 aaKnown RBP3.05□□□□□ -1.92
GABPB1-204ENST00000396464 LINC00526Q96FQ7 95 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 OR8B2Q96RD0 313 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 UTRNP46939 3433 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 RBBP6Q7Z6E9 1792 aaKnown RBP3.05□□□□□ -1.92
GABPB1-204ENST00000396464 LCTP09848 1927 aa3.05□□□□□ -1.92
GABPB1-204ENST00000396464 ARID1AO14497 2285 aa3.04□□□□□ -1.92
GABPB1-204ENST00000396464 PNMA8CA0A1B0GUJ8 204 aa3.04□□□□□ -1.92
GABPB1-204ENST00000396464 C7orf66A4D0T2 115 aa3.04□□□□□ -1.92
GABPB1-204ENST00000396464 A6NN06 94 aa3.04□□□□□ -1.92
GABPB1-204ENST00000396464 OOSP1A8MZH6 123 aa3.04□□□□□ -1.92
GABPB1-204ENST00000396464 ZNF736B4DX44 427 aaPredicted RBP3.04□□□□□ -1.92
GABPB1-204ENST00000396464 MCRIP1C9JLW8 97 aa3.04□□□□□ -1.92
GABPB1-204ENST00000396464 YPEL1O60688 119 aa3.04□□□□□ -1.92
GABPB1-204ENST00000396464 CKS2P33552 79 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms