RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CFHR4Q92496 578 aa8.16□□□□□ -1.1
COL4A6-203ENST00000394872 C20orf78Q9BR46 151 aa8.16□□□□□ -1.1
COL4A6-203ENST00000394872 C1orf43Q9BWL3 253 aa8.16□□□□□ -1.1
COL4A6-203ENST00000394872 UBL5Q9BZL1 73 aa8.16□□□□□ -1.1
COL4A6-203ENST00000394872 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.15□□□□□ -1.1
COL4A6-203ENST00000394872 IGKV2-29A2NJV5 120 aaPredicted RBP8.15□□□□□ -1.1
COL4A6-203ENST00000394872 TRBV20-1A0A075B6N2 111 aa8.15□□□□□ -1.1
COL4A6-203ENST00000394872 C11orf53Q8IXP5 236 aa8.15□□□□□ -1.1
COL4A6-203ENST00000394872 MRPL35Q9NZE8 188 aaKnown RBP8.15□□□□□ -1.1
COL4A6-203ENST00000394872 ANAPC1Q9H1A4 1944 aa8.15□□□□□ -1.1
COL4A6-203ENST00000394872 NPSP0C0P6 89 aa8.15□□□□□ -1.1
COL4A6-203ENST00000394872 HAMPP81172 84 aa8.15□□□□□ -1.1
COL4A6-203ENST00000394872 C16orf74Q96GX8 76 aa8.15□□□□□ -1.1
COL4A6-203ENST00000394872 ICOSQ9Y6W8 199 aa8.15□□□□□ -1.1
COL4A6-203ENST00000394872 KMT2EQ8IZD2 1858 aa8.15□□□□□ -1.1
COL4A6-203ENST00000394872 NUP210Q8TEM1 1887 aaPredicted RBP8.15□□□□□ -1.1
COL4A6-203ENST00000394872 TEX48A0A1B0GUV7 120 aa8.15□□□□□ -1.1
COL4A6-203ENST00000394872 LGALS9BQ3B8N2 356 aa8.15□□□□□ -1.1
COL4A6-203ENST00000394872 LGALS9CQ6DKI2 356 aa8.15□□□□□ -1.1
COL4A6-203ENST00000394872 NCOR1O75376 2440 aa8.15□□□□□ -1.11
COL4A6-203ENST00000394872 IGLV3-1P01715 115 aa8.15□□□□□ -1.11
COL4A6-203ENST00000394872 CCL18P55774 89 aa8.15□□□□□ -1.11
COL4A6-203ENST00000394872 C10orf105Q8TEF2 133 aa8.15□□□□□ -1.11
COL4A6-203ENST00000394872 LTAP01374 205 aa8.14□□□□□ -1.11
COL4A6-203ENST00000394872 SPART-AS1P0CW21 52 aa8.14□□□□□ -1.11
COL4A6-203ENST00000394872 POU2AF1Q16633 256 aa8.14□□□□□ -1.11
COL4A6-203ENST00000394872 DEFB105AQ8NG35 78 aa8.14□□□□□ -1.11
COL4A6-203ENST00000394872 BLCAPP62952 87 aa8.14□□□□□ -1.11
COL4A6-203ENST00000394872 NPBQ8NG41 125 aa8.14□□□□□ -1.11
COL4A6-203ENST00000394872 PKIGQ9Y2B9 76 aa8.14□□□□□ -1.11
COL4A6-203ENST00000394872 F8VRH5 84 aa8.14□□□□□ -1.11
COL4A6-203ENST00000394872 BUB3O43684 328 aa8.14□□□□□ -1.11
COL4A6-203ENST00000394872 GYPEP15421 78 aa8.14□□□□□ -1.11
COL4A6-203ENST00000394872 AJUBAQ96IF1 538 aa8.14□□□□□ -1.11
COL4A6-203ENST00000394872 RBAKDNA6NC62 111 aa8.14□□□□□ -1.11
COL4A6-203ENST00000394872 AGPAT4-IT1Q9H0P7 198 aa8.14□□□□□ -1.11
COL4A6-203ENST00000394872 J3QQQ9 107 aa8.13□□□□□ -1.11
COL4A6-203ENST00000394872 ABCA4P78363 2273 aa8.13□□□□□ -1.11
COL4A6-203ENST00000394872 CADP27708 2225 aa8.13□□□□□ -1.11
COL4A6-203ENST00000394872 IGHV7-81A0A0B4J1V7 117 aa8.13□□□□□ -1.11
COL4A6-203ENST00000394872 IGHV3-30P01768 117 aa8.13□□□□□ -1.11
COL4A6-203ENST00000394872 IGHV3-33P01772 117 aa8.13□□□□□ -1.11
COL4A6-203ENST00000394872 IGHV3-30-3P0DP02 117 aa8.13□□□□□ -1.11
COL4A6-203ENST00000394872 IGHV3-30-5P0DP03 117 aa8.13□□□□□ -1.11
COL4A6-203ENST00000394872 NDUFS5O43920 106 aa8.13□□□□□ -1.11
COL4A6-203ENST00000394872 CEND1Q8N111 149 aa8.13□□□□□ -1.11
COL4A6-203ENST00000394872 DOPEY2Q9Y3R5 2298 aa8.13□□□□□ -1.11
COL4A6-203ENST00000394872 F8W735 103 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-203ENST00000394872 CRYGCP07315 174 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 EGR2P11161 476 aaPredicted RBP8.12□□□□□ -1.11
COL4A6-203ENST00000394872 MRPL23Q16540 153 aaKnown RBP8.12□□□□□ -1.11
COL4A6-203ENST00000394872 WIPF2Q8TF74 440 aaPredicted RBP8.12□□□□□ -1.11
COL4A6-203ENST00000394872 hADV29S1A0JD25 119 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 UTF1Q5T230 341 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 PRO1854Q9UHT4 67 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 C9orf118A6NHY6 69 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 IGHG4P01861 327 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 RITA1Q96K30 269 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 IGHV4OR15-8A0A075B7B6 117 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 A0A087WW49 117 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 WIPF3A6NGB9 483 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 ATP5G1P05496 136 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 TRAV12-1A0A0B4J245 112 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 K7EQD1 137 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 SPRY2O43597 315 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 COX8AP10176 69 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 HEATR5AQ86XA9 2040 aa8.12□□□□□ -1.11
COL4A6-203ENST00000394872 PRR20EP86478 221 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 PRR20CP86479 221 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 PRR20DP86480 221 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 PRR20BP86481 221 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 PRR20AP86496 221 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 IFITM1P13164 125 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 ZNF493Q6ZR52 646 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 Q6ZWC4 215 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 C5orf38Q86SI9 138 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 C5orf56Q8N8D9 126 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 RNF152Q8N8N0 203 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 ATP6V0E2Q8NHE4 81 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 C11orf52Q96A22 123 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 C20orf144Q9BQM9 153 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 ESM1Q9NQ30 184 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 SLC25A29Q8N8R3 303 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 ZNF503Q96F45 646 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 CARD19Q96LW7 228 aa8.11□□□□□ -1.11
COL4A6-203ENST00000394872 TINCRA0A1B0GVN0 87 aa8.1□□□□□ -1.11
COL4A6-203ENST00000394872 TIRAPP58753 221 aa8.1□□□□□ -1.11
COL4A6-203ENST00000394872 TRACP01848 142 aa8.1□□□□□ -1.11
COL4A6-203ENST00000394872 CAMK2N2Q96S95 79 aa8.1□□□□□ -1.11
COL4A6-203ENST00000394872 LENEPQ9Y5L5 61 aa8.1□□□□□ -1.11
COL4A6-203ENST00000394872 IGLV10-54A0A075B6I4 117 aa8.1□□□□□ -1.11
COL4A6-203ENST00000394872 DAZAP2Q15038 168 aaPredicted RBP8.1□□□□□ -1.11
COL4A6-203ENST00000394872 BOD1L2Q8IYS8 172 aa8.1□□□□□ -1.11
COL4A6-203ENST00000394872 PKDREJQ9NTG1 2253 aa8.1□□□□□ -1.11
COL4A6-203ENST00000394872 IGHV4-4A0A075B6R2 117 aa8.1□□□□□ -1.11
COL4A6-203ENST00000394872 K7EN84 100 aa8.1□□□□□ -1.11
COL4A6-203ENST00000394872 DKK2Q9UBU2 259 aa8.1□□□□□ -1.11
COL4A6-203ENST00000394872 DOCK9Q9BZ29 2069 aa8.1□□□□□ -1.11
COL4A6-203ENST00000394872 NCKAP5O14513 1909 aa8.09□□□□□ -1.11
COL4A6-203ENST00000394872 SH2D6Q7Z4S9 175 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms