RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 IGLC1P0CG04 106 aa11.71□□□□□ -0.53
LRRK1-201ENST00000388948 GAGE2EQ4V326 116 aa11.71□□□□□ -0.53
LRRK1-201ENST00000388948 ZNF503Q96F45 646 aa11.71□□□□□ -0.53
LRRK1-201ENST00000388948 GAGE2DQ9UEU5 116 aa11.71□□□□□ -0.53
LRRK1-201ENST00000388948 HIVEP3Q5T1R4 2406 aa11.71□□□□□ -0.53
LRRK1-201ENST00000388948 C16orf74Q96GX8 76 aa11.71□□□□□ -0.54
LRRK1-201ENST00000388948 FREM1Q5H8C1 2179 aa11.71□□□□□ -0.54
LRRK1-201ENST00000388948 DEFB135Q30KP9 77 aa11.71□□□□□ -0.54
LRRK1-201ENST00000388948 CXCL1P09341 107 aa11.71□□□□□ -0.54
LRRK1-201ENST00000388948 IGLL5B9A064 214 aa11.7□□□□□ -0.54
LRRK1-201ENST00000388948 FHL1Q13642 323 aa11.7□□□□□ -0.54
LRRK1-201ENST00000388948 GAGE2AQ6NT46 116 aa11.7□□□□□ -0.54
LRRK1-201ENST00000388948 TRBV24-1A0A075B6N3 115 aa11.7□□□□□ -0.54
LRRK1-201ENST00000388948 DOPEY1Q5JWR5 2465 aa11.7□□□□□ -0.54
LRRK1-201ENST00000388948 AJUBAQ96IF1 538 aa11.7□□□□□ -0.54
LRRK1-201ENST00000388948 NAA38Q9BRA0 125 aaKnown RBP11.7□□□□□ -0.54
LRRK1-201ENST00000388948 VOPP1Q96AW1 172 aa11.7□□□□□ -0.54
LRRK1-201ENST00000388948 PRORYQ9H606 182 aa11.7□□□□□ -0.54
LRRK1-201ENST00000388948 CITED2Q99967 270 aaPredicted RBP11.69□□□□□ -0.54
LRRK1-201ENST00000388948 TMEM14CQ9P0S9 112 aa11.69□□□□□ -0.54
LRRK1-201ENST00000388948 C2orf16Q68DN1 1984 aa11.69□□□□□ -0.54
LRRK1-201ENST00000388948 IGHV4OR15-8A0A075B7B6 117 aa11.69□□□□□ -0.54
LRRK1-201ENST00000388948 A0A087WW49 117 aa11.69□□□□□ -0.54
LRRK1-201ENST00000388948 SYS1-DBNDD2H3BUS1 97 aa11.69□□□□□ -0.54
LRRK1-201ENST00000388948 NDUFS5O43920 106 aa11.69□□□□□ -0.54
LRRK1-201ENST00000388948 SPRNQ5BIV9 151 aa11.69□□□□□ -0.54
LRRK1-201ENST00000388948 DEFB4AO15263 64 aa11.69□□□□□ -0.54
LRRK1-201ENST00000388948 MYCNOSP40205 109 aa11.69□□□□□ -0.54
LRRK1-201ENST00000388948 SRSF2Q01130 221 aaKnown RBP11.69□□□□□ -0.54
LRRK1-201ENST00000388948 FAM104BQ5XKR9 115 aa11.69□□□□□ -0.54
LRRK1-201ENST00000388948 DEFB105AQ8NG35 78 aa11.69□□□□□ -0.54
LRRK1-201ENST00000388948 ZNF492Q9P255 531 aa11.69□□□□□ -0.54
LRRK1-201ENST00000388948 GNRH2O43555 120 aa11.68□□□□□ -0.54
LRRK1-201ENST00000388948 TIRAPP58753 221 aa11.68□□□□□ -0.54
LRRK1-201ENST00000388948 HERVK_113P63121 156 aa11.68□□□□□ -0.54
LRRK1-201ENST00000388948 IGLV10-54A0A075B6I4 117 aa11.68□□□□□ -0.54
LRRK1-201ENST00000388948 LINC00518Q8N0U6 118 aa11.68□□□□□ -0.54
LRRK1-201ENST00000388948 HLA-DMBP28068 263 aa11.68□□□□□ -0.54
LRRK1-201ENST00000388948 Q8N8P6 123 aa11.68□□□□□ -0.54
LRRK1-201ENST00000388948 ZNF524Q96C55 264 aa11.68□□□□□ -0.54
LRRK1-201ENST00000388948 C4orf48Q5BLP8 95 aa11.67□□□□□ -0.54
LRRK1-201ENST00000388948 SH2D6Q7Z4S9 175 aa11.67□□□□□ -0.54
LRRK1-201ENST00000388948 A0A087X0K7 114 aa11.67□□□□□ -0.54
LRRK1-201ENST00000388948 ZNF491Q8N8L2 437 aa11.67□□□□□ -0.54
LRRK1-201ENST00000388948 PRSS57Q6UWY2 283 aa11.67□□□□□ -0.54
LRRK1-201ENST00000388948 ANKHD1Q8IWZ3 2542 aaKnown RBP11.67□□□□□ -0.54
LRRK1-201ENST00000388948 INAFM1C9JVW0 142 aa11.67□□□□□ -0.54
LRRK1-201ENST00000388948 CAMK2N2Q96S95 79 aa11.67□□□□□ -0.54
LRRK1-201ENST00000388948 DENND4CQ5VZ89 1909 aa11.66□□□□□ -0.54
LRRK1-201ENST00000388948 ATP6V0E2Q8NHE4 81 aa11.66□□□□□ -0.54
LRRK1-201ENST00000388948 IGHV7-81A0A0B4J1V7 117 aa11.66□□□□□ -0.54
LRRK1-201ENST00000388948 SPINK8P0C7L1 97 aa11.66□□□□□ -0.54
LRRK1-201ENST00000388948 OCIAD2Q56VL3 154 aa11.66□□□□□ -0.54
LRRK1-201ENST00000388948 MRPL51Q4U2R6 128 aaKnown RBP11.66□□□□□ -0.54
LRRK1-201ENST00000388948 HIST1H2BLQ99880 126 aa11.66□□□□□ -0.54
LRRK1-201ENST00000388948 C8orf31Q8N9H6 132 aa11.66□□□□□ -0.54
LRRK1-201ENST00000388948 TM2D2Q9BX73 214 aa11.66□□□□□ -0.54
LRRK1-201ENST00000388948 DNAJC9-AS1A6NH13 148 aa11.65□□□□□ -0.54
LRRK1-201ENST00000388948 RSPO1Q2MKA7 263 aaPredicted RBP11.65□□□□□ -0.54
LRRK1-201ENST00000388948 TIMM17AQ99595 171 aa11.65□□□□□ -0.54
LRRK1-201ENST00000388948 NDUFA12Q9UI09 145 aa11.65□□□□□ -0.54
LRRK1-201ENST00000388948 STPG4Q8N801 248 aa11.65□□□□□ -0.54
LRRK1-201ENST00000388948 C15orf53Q8NAA6 179 aa11.65□□□□□ -0.54
LRRK1-201ENST00000388948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.64□□□□□ -0.55
LRRK1-201ENST00000388948 IGKV2-29A2NJV5 120 aaPredicted RBP11.64□□□□□ -0.55
LRRK1-201ENST00000388948 SOCS3O14543 225 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 ADAMTSL5Q6ZMM2 481 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 C5orf56Q8N8D9 126 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 DSCR8Q96T75 97 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 PIEZO1Q92508 2521 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 TMEM131Q92545 1883 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 hADV29S1A0JD25 119 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 ZNF493Q6ZR52 646 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 DYNAPQ8N1N2 210 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 NAV3Q8IVL0 2385 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 C5orf38Q86SI9 138 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 ZC2HC1AQ96GY0 325 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 CYYR1Q96J86 154 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 ETDCA0A1B0GVM5 59 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 FAM231BA6NCW3 169 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 IGLC7A0M8Q6 106 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 CD5LO43866 347 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 RNF183Q96D59 192 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 C17orf77Q96MU5 243 aa11.64□□□□□ -0.55
LRRK1-201ENST00000388948 SIGLEC8Q9NYZ4 499 aa11.63□□□□□ -0.55
LRRK1-201ENST00000388948 C3orf79P0CE67 100 aa11.63□□□□□ -0.55
LRRK1-201ENST00000388948 CFHR4Q92496 578 aa11.63□□□□□ -0.55
LRRK1-201ENST00000388948 C9JAW5 83 aa11.63□□□□□ -0.55
LRRK1-201ENST00000388948 CT83Q5H943 113 aa11.63□□□□□ -0.55
LRRK1-201ENST00000388948 C2orf70A6NJV1 201 aa11.63□□□□□ -0.55
LRRK1-201ENST00000388948 RNF152Q8N8N0 203 aa11.63□□□□□ -0.55
LRRK1-201ENST00000388948 AMTNQ6UX39 209 aa11.63□□□□□ -0.55
LRRK1-201ENST00000388948 C4orf3Q8WVX3 66 aa11.62□□□□□ -0.55
LRRK1-201ENST00000388948 Q6ZWC4 215 aa11.62□□□□□ -0.55
LRRK1-201ENST00000388948 ZNF843Q8N446 348 aa11.62□□□□□ -0.55
LRRK1-201ENST00000388948 C11orf53Q8IXP5 236 aa11.62□□□□□ -0.55
LRRK1-201ENST00000388948 NPBQ8NG41 125 aa11.62□□□□□ -0.55
LRRK1-201ENST00000388948 FANCD2OSQ96PS1 177 aa11.62□□□□□ -0.55
LRRK1-201ENST00000388948 INSL3P51460 131 aa11.62□□□□□ -0.55
LRRK1-201ENST00000388948 IGHV4-4A0A075B6R2 117 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms