RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ZNF747Q9BV97 191 aa12.63□□□□□ -0.39
COL2A1-202ENST00000380518 WDR81Q562E7 1941 aa12.62□□□□□ -0.39
COL2A1-202ENST00000380518 K7EMI3 77 aa12.62□□□□□ -0.39
COL2A1-202ENST00000380518 HOXB4P17483 251 aaPredicted RBP12.62□□□□□ -0.39
COL2A1-202ENST00000380518 FGF23Q9GZV9 251 aaPredicted RBP12.62□□□□□ -0.39
COL2A1-202ENST00000380518 LHBP01229 141 aa12.62□□□□□ -0.39
COL2A1-202ENST00000380518 Q6ZSR3 168 aa12.62□□□□□ -0.39
COL2A1-202ENST00000380518 NKAPP1Q8N9T2 125 aa12.62□□□□□ -0.39
COL2A1-202ENST00000380518 DKK2Q9UBU2 259 aa12.62□□□□□ -0.39
COL2A1-202ENST00000380518 KLF5Q13887 457 aaPredicted RBP12.62□□□□□ -0.39
COL2A1-202ENST00000380518 A0A1W2PPM0 123 aa12.61□□□□□ -0.39
COL2A1-202ENST00000380518 IGFL2Q6UWQ7 119 aa12.61□□□□□ -0.39
COL2A1-202ENST00000380518 NBL1P41271 181 aa12.61□□□□□ -0.39
COL2A1-202ENST00000380518 F6UB75 175 aa12.6□□□□□ -0.39
COL2A1-202ENST00000380518 RHOHQ15669 191 aa12.6□□□□□ -0.39
COL2A1-202ENST00000380518 UTF1Q5T230 341 aa12.6□□□□□ -0.39
COL2A1-202ENST00000380518 UBL5Q9BZL1 73 aa12.6□□□□□ -0.39
COL2A1-202ENST00000380518 NPSP0C0P6 89 aa12.6□□□□□ -0.39
COL2A1-202ENST00000380518 TSSC4Q9Y5U2 329 aaPredicted RBP12.6□□□□□ -0.39
COL2A1-202ENST00000380518 TRAV13-2A0A0B4J235 113 aa12.6□□□□□ -0.39
COL2A1-202ENST00000380518 CENPVL3A0A0U1RRI6 287 aa12.6□□□□□ -0.39
COL2A1-202ENST00000380518 TMEM126AQ9H061 195 aa12.6□□□□□ -0.39
COL2A1-202ENST00000380518 PRSS29PA6NIE9 313 aa12.6□□□□□ -0.39
COL2A1-202ENST00000380518 FOXE3Q13461 319 aa12.6□□□□□ -0.39
COL2A1-202ENST00000380518 VPREB3Q9UKI3 123 aa12.6□□□□□ -0.39
COL2A1-202ENST00000380518 KRTAP27-1Q3LI81 207 aa12.59□□□□□ -0.39
COL2A1-202ENST00000380518 GNRH2O43555 120 aa12.59□□□□□ -0.39
COL2A1-202ENST00000380518 CFHR4Q92496 578 aa12.59□□□□□ -0.39
COL2A1-202ENST00000380518 NOTCH2Q04721 2471 aa12.59□□□□□ -0.39
COL2A1-202ENST00000380518 COA6Q5JTJ3 125 aaKnown RBP12.59□□□□□ -0.39
COL2A1-202ENST00000380518 DEFB112Q30KQ8 113 aa12.59□□□□□ -0.39
COL2A1-202ENST00000380518 WT1P19544 449 aaPredicted RBP12.58□□□□□ -0.4
COL2A1-202ENST00000380518 HOXD3P31249 432 aaPredicted RBP12.58□□□□□ -0.4
COL2A1-202ENST00000380518 LYPD6Q86Y78 171 aa12.58□□□□□ -0.4
COL2A1-202ENST00000380518 SPG11Q96JI7 2443 aa12.58□□□□□ -0.4
COL2A1-202ENST00000380518 IGHV4-59P01825 116 aa12.58□□□□□ -0.4
COL2A1-202ENST00000380518 SCRT2Q9NQ03 307 aa12.58□□□□□ -0.4
COL2A1-202ENST00000380518 ANGP03950 147 aaKnown RBP12.57□□□□□ -0.4
COL2A1-202ENST00000380518 GRNP28799 593 aaKnown RBP12.57□□□□□ -0.4
COL2A1-202ENST00000380518 C9orf153Q5TBE3 101 aa12.57□□□□□ -0.4
COL2A1-202ENST00000380518 NOTCH4Q99466 2003 aa12.57□□□□□ -0.4
COL2A1-202ENST00000380518 PLCE1Q9P212 2302 aa12.57□□□□□ -0.4
COL2A1-202ENST00000380518 RPL32P62910 135 aaKnown RBP12.57□□□□□ -0.4
COL2A1-202ENST00000380518 BOD1L2Q8IYS8 172 aa12.57□□□□□ -0.4
COL2A1-202ENST00000380518 IGKV1-17P01599 117 aa12.57□□□□□ -0.4
COL2A1-202ENST00000380518 GP9P14770 177 aa12.57□□□□□ -0.4
COL2A1-202ENST00000380518 I3L2K1 104 aa12.57□□□□□ -0.4
COL2A1-202ENST00000380518 J3QKU1 62 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 K7EIM0 57 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 NPBQ8NG41 125 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 IGF2BP2-AS1Q96M15 143 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 ANAPC1Q9H1A4 1944 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 H3BMG7 143 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 CARD19Q96LW7 228 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 MGAMO43451 1857 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 IGHV7-81A0A0B4J1V7 117 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 K7ERJ3 54 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 SPRNQ5BIV9 151 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 SPANXDQ9BXN6 97 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 DKK4Q9UBT3 224 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 CRLF1O75462 422 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 RBMY1FQ15415 496 aaKnown RBP12.56□□□□□ -0.4
COL2A1-202ENST00000380518 C12orf74Q32Q52 190 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 RNASE13Q5GAN3 156 aaKnown RBP12.56□□□□□ -0.4
COL2A1-202ENST00000380518 RMI2Q96E14 147 aa12.56□□□□□ -0.4
COL2A1-202ENST00000380518 KIAA1671Q9BY89 1806 aa12.55□□□□□ -0.4
COL2A1-202ENST00000380518 PRSS33Q8NF86 280 aa12.55□□□□□ -0.4
COL2A1-202ENST00000380518 U3KQE9 123 aa12.55□□□□□ -0.4
COL2A1-202ENST00000380518 HAMPP81172 84 aa12.55□□□□□ -0.4
COL2A1-202ENST00000380518 MAJINQ3KP22 176 aa12.55□□□□□ -0.4
COL2A1-202ENST00000380518 IGLV11-55A0A075B6I3 123 aa12.55□□□□□ -0.4
COL2A1-202ENST00000380518 MUC6Q6W4X9 2439 aa12.54□□□□□ -0.4
COL2A1-202ENST00000380518 EML6Q6ZMW3 1958 aa12.54□□□□□ -0.4
COL2A1-202ENST00000380518 AMTNQ6UX39 209 aa12.53□□□□□ -0.4
COL2A1-202ENST00000380518 NOP10Q9NPE3 64 aaKnown RBP12.53□□□□□ -0.4
COL2A1-202ENST00000380518 A0A096LPF7 62 aa12.53□□□□□ -0.4
COL2A1-202ENST00000380518 PATE2Q6UY27 113 aa12.53□□□□□ -0.4
COL2A1-202ENST00000380518 IGF2-ASQ6U949 168 aa12.53□□□□□ -0.4
COL2A1-202ENST00000380518 PLXND1Q9Y4D7 1925 aa12.53□□□□□ -0.4
COL2A1-202ENST00000380518 CTSGP08311 255 aa12.53□□□□□ -0.4
COL2A1-202ENST00000380518 TRAV25A0A0B4J276 109 aa12.52□□□□□ -0.4
COL2A1-202ENST00000380518 CFC1BP0CG36 223 aa12.52□□□□□ -0.4
COL2A1-202ENST00000380518 CFC1P0CG37 223 aa12.52□□□□□ -0.4
COL2A1-202ENST00000380518 IGHV4-61A0A0C4DH41 118 aa12.52□□□□□ -0.4
COL2A1-202ENST00000380518 GATA1P15976 413 aaPredicted RBP12.52□□□□□ -0.4
COL2A1-202ENST00000380518 KIR2DL5BA0A0G2JN68 375 aa12.52□□□□□ -0.41
COL2A1-202ENST00000380518 KIR2DL5BA0A0G2JPC4 375 aa12.52□□□□□ -0.41
COL2A1-202ENST00000380518 KIR2DL5AQ8N109 375 aa12.52□□□□□ -0.41
COL2A1-202ENST00000380518 CCL24O00175 119 aa12.52□□□□□ -0.41
COL2A1-202ENST00000380518 PCP2Q8IVA1 136 aa12.52□□□□□ -0.41
COL2A1-202ENST00000380518 DSCR8Q96T75 97 aa12.51□□□□□ -0.41
COL2A1-202ENST00000380518 SUMO4Q6EEV6 95 aa12.51□□□□□ -0.41
COL2A1-202ENST00000380518 DYSFO75923 2080 aa12.51□□□□□ -0.41
COL2A1-202ENST00000380518 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.5□□□□□ -0.41
COL2A1-202ENST00000380518 IGKV2-29A2NJV5 120 aaPredicted RBP12.5□□□□□ -0.41
COL2A1-202ENST00000380518 GAGE12HA6NDE8 117 aa12.5□□□□□ -0.41
COL2A1-202ENST00000380518 RNF152Q8N8N0 203 aa12.5□□□□□ -0.41
COL2A1-202ENST00000380518 AJUBAQ96IF1 538 aa12.5□□□□□ -0.41
COL2A1-202ENST00000380518 Q9H8V8 135 aa12.5□□□□□ -0.41
COL2A1-202ENST00000380518 BUB3O43684 328 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms