RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 Q6YL49 198 aa15.31■□□□□ 0.04
VSX1-202ENST00000376709 ZNF747Q9BV97 191 aa15.31■□□□□ 0.04
VSX1-202ENST00000376709 UFC1Q9Y3C8 167 aa15.31■□□□□ 0.04
VSX1-202ENST00000376709 F6UB75 175 aa15.3■□□□□ 0.04
VSX1-202ENST00000376709 SMIM15Q7Z3B0 74 aa15.3■□□□□ 0.04
VSX1-202ENST00000376709 ZFAND2AQ8N6M9 145 aa15.3■□□□□ 0.04
VSX1-202ENST00000376709 OR8A1Q8NGG7 326 aa15.3■□□□□ 0.04
VSX1-202ENST00000376709 PLA2G2AP14555 144 aa15.29■□□□□ 0.04
VSX1-202ENST00000376709 SPANXN1Q5VSR9 72 aa15.29■□□□□ 0.04
VSX1-202ENST00000376709 TRAV21A0A0B4J279 112 aa15.29■□□□□ 0.04
VSX1-202ENST00000376709 hDV102S1A0JD36 115 aa15.29■□□□□ 0.04
VSX1-202ENST00000376709 MAP1LC3AQ9H492 121 aa15.29■□□□□ 0.04
VSX1-202ENST00000376709 A0A096LNJ9 63 aa15.28■□□□□ 0.04
VSX1-202ENST00000376709 H3BVH4 76 aa15.28■□□□□ 0.04
VSX1-202ENST00000376709 HOXA3O43365 443 aaPredicted RBP15.28■□□□□ 0.04
VSX1-202ENST00000376709 EVI2AP22794 236 aa15.28■□□□□ 0.04
VSX1-202ENST00000376709 TSPOP30536 169 aa15.28■□□□□ 0.04
VSX1-202ENST00000376709 TP73-AS1Q9UF72 201 aa15.28■□□□□ 0.04
VSX1-202ENST00000376709 ITPR3Q14573 2671 aa15.28■□□□□ 0.04
VSX1-202ENST00000376709 PMCHL2Q9BQD1 86 aa15.28■□□□□ 0.04
VSX1-202ENST00000376709 LAMTOR2Q9Y2Q5 125 aa15.28■□□□□ 0.04
VSX1-202ENST00000376709 PRRC2AP48634 2157 aaKnown RBP15.27■□□□□ 0.04
VSX1-202ENST00000376709 HSBP1L1C9JCN9 74 aa15.27■□□□□ 0.04
VSX1-202ENST00000376709 ID1P41134 155 aa15.27■□□□□ 0.04
VSX1-202ENST00000376709 SNAI2O43623 268 aa15.26■□□□□ 0.03
VSX1-202ENST00000376709 GAS8-AS1O95177 125 aa15.26■□□□□ 0.03
VSX1-202ENST00000376709 TNFRSF6BO95407 300 aa15.26■□□□□ 0.03
VSX1-202ENST00000376709 HBDP02042 147 aa15.26■□□□□ 0.03
VSX1-202ENST00000376709 RNASE4P34096 147 aaKnown RBP15.26■□□□□ 0.03
VSX1-202ENST00000376709 FXYD7P58549 80 aa15.26■□□□□ 0.03
VSX1-202ENST00000376709 CACNG7P62955 275 aa15.26■□□□□ 0.03
VSX1-202ENST00000376709 WFDC3Q8IUB2 231 aa15.26■□□□□ 0.03
VSX1-202ENST00000376709 J3QKU1 62 aa15.26■□□□□ 0.03
VSX1-202ENST00000376709 LINC01545Q5VT33 79 aa15.26■□□□□ 0.03
VSX1-202ENST00000376709 G0S2P27469 103 aa15.25■□□□□ 0.03
VSX1-202ENST00000376709 SAMD13Q5VXD3 122 aa15.25■□□□□ 0.03
VSX1-202ENST00000376709 ZNF702PQ9H963 129 aa15.25■□□□□ 0.03
VSX1-202ENST00000376709 HELZ2Q9BYK8 2649 aaKnown RBP15.25■□□□□ 0.03
VSX1-202ENST00000376709 TFPI2P48307 235 aa15.25■□□□□ 0.03
VSX1-202ENST00000376709 DCANP1Q8TF63 244 aa15.25■□□□□ 0.03
VSX1-202ENST00000376709 FAM19A4Q96LR4 140 aa15.25■□□□□ 0.03
VSX1-202ENST00000376709 ST20Q9HBF5 79 aa15.25■□□□□ 0.03
VSX1-202ENST00000376709 IGHV4-4A0A075B6R2 117 aa15.24■□□□□ 0.03
VSX1-202ENST00000376709 ELANEP08246 267 aa15.24■□□□□ 0.03
VSX1-202ENST00000376709 S100A4P26447 101 aaKnown RBP15.24■□□□□ 0.03
VSX1-202ENST00000376709 GATA1P15976 413 aaPredicted RBP15.24■□□□□ 0.03
VSX1-202ENST00000376709 WFDC11Q8NEX6 87 aa15.24■□□□□ 0.03
VSX1-202ENST00000376709 TRBV7-9A0A0J9YWB2 115 aa15.23■□□□□ 0.03
VSX1-202ENST00000376709 LGALS1P09382 135 aaKnown RBP15.23■□□□□ 0.03
VSX1-202ENST00000376709 NXT2Q9NPJ8 142 aaKnown RBP15.23■□□□□ 0.03
VSX1-202ENST00000376709 ASIPP42127 132 aa15.22■□□□□ 0.03
VSX1-202ENST00000376709 KIR3DS1Q14943 382 aa15.22■□□□□ 0.03
VSX1-202ENST00000376709 COL5A1-AS1Q5SY13 56 aa15.22■□□□□ 0.03
VSX1-202ENST00000376709 STPG4Q8N801 248 aa15.22■□□□□ 0.03
VSX1-202ENST00000376709 MRPS16Q9Y3D3 137 aaKnown RBP15.22■□□□□ 0.03
VSX1-202ENST00000376709 ZNF25P17030 456 aaPredicted RBP15.22■□□□□ 0.03
VSX1-202ENST00000376709 SYNJ2BPP57105 145 aa15.22■□□□□ 0.03
VSX1-202ENST00000376709 ANXA2RQ3ZCQ2 193 aa15.22■□□□□ 0.03
VSX1-202ENST00000376709 MS4A6AQ9H2W1 248 aa15.22■□□□□ 0.03
VSX1-202ENST00000376709 CCDC168Q8NDH2 2452 aa15.21■□□□□ 0.03
VSX1-202ENST00000376709 M0R381 172 aa15.21■□□□□ 0.03
VSX1-202ENST00000376709 APRG1Q8IVJ8 170 aa15.21■□□□□ 0.03
VSX1-202ENST00000376709 DUX5Q96PT3 197 aa15.21■□□□□ 0.03
VSX1-202ENST00000376709 TLN2Q9Y4G6 2542 aa15.21■□□□□ 0.03
VSX1-202ENST00000376709 TRAV26-2A0A0B4J265 109 aa15.21■□□□□ 0.02
VSX1-202ENST00000376709 HINT1P49773 126 aaPredicted RBP15.21■□□□□ 0.02
VSX1-202ENST00000376709 OR2K2Q8NGT1 345 aa15.21■□□□□ 0.02
VSX1-202ENST00000376709 UBE2E2Q96LR5 201 aa15.21■□□□□ 0.02
VSX1-202ENST00000376709 PDZD2O15018 2839 aa15.2■□□□□ 0.02
VSX1-202ENST00000376709 IGHV4OR15-8A0A075B7B6 117 aa15.2■□□□□ 0.02
VSX1-202ENST00000376709 A0A087WW49 117 aa15.2■□□□□ 0.02
VSX1-202ENST00000376709 MYOZ3Q8TDC0 251 aa15.2■□□□□ 0.02
VSX1-202ENST00000376709 PHLDA3Q9Y5J5 127 aa15.2■□□□□ 0.02
VSX1-202ENST00000376709 ZNF688P0C7X2 276 aa15.19■□□□□ 0.02
VSX1-202ENST00000376709 IFI27L1Q96BM0 104 aa15.19■□□□□ 0.02
VSX1-202ENST00000376709 FLNAP21333 2647 aaKnown RBP15.18■□□□□ 0.02
VSX1-202ENST00000376709 LINC01546A6NGU7 62 aa15.18■□□□□ 0.02
VSX1-202ENST00000376709 HOXD3P31249 432 aaPredicted RBP15.18■□□□□ 0.02
VSX1-202ENST00000376709 LEPP41159 167 aa15.18■□□□□ 0.02
VSX1-202ENST00000376709 SNRPD3P62318 126 aaKnown RBP15.18■□□□□ 0.02
VSX1-202ENST00000376709 PSMG4Q5JS54 123 aa15.18■□□□□ 0.02
VSX1-202ENST00000376709 GOLT1BQ9Y3E0 138 aa15.18■□□□□ 0.02
VSX1-202ENST00000376709 SPRY2O43597 315 aa15.18■□□□□ 0.02
VSX1-202ENST00000376709 SCRT2Q9NQ03 307 aa15.18■□□□□ 0.02
VSX1-202ENST00000376709 KLLNB2CW77 178 aa15.17■□□□□ 0.02
VSX1-202ENST00000376709 LGALS9O00182 355 aa15.17■□□□□ 0.02
VSX1-202ENST00000376709 GNRH2O43555 120 aa15.17■□□□□ 0.02
VSX1-202ENST00000376709 Q8N8P6 123 aa15.17■□□□□ 0.02
VSX1-202ENST00000376709 WFDC12Q8WWY7 111 aa15.17■□□□□ 0.02
VSX1-202ENST00000376709 ITPR2Q14571 2701 aa15.17■□□□□ 0.02
VSX1-202ENST00000376709 NRACQ8N912 160 aa15.17■□□□□ 0.02
VSX1-202ENST00000376709 C18orf15Q96N68 181 aa15.17■□□□□ 0.02
VSX1-202ENST00000376709 TMEM208Q9BTX3 173 aa15.17■□□□□ 0.02
VSX1-202ENST00000376709 AKAP9Q99996 3911 aa15.16■□□□□ 0.02
VSX1-202ENST00000376709 MED14OSP0DP75 135 aa15.16■□□□□ 0.02
VSX1-202ENST00000376709 FCER1GP30273 86 aa15.16■□□□□ 0.02
VSX1-202ENST00000376709 LGALS9BQ3B8N2 356 aa15.16■□□□□ 0.02
VSX1-202ENST00000376709 LGALS9CQ6DKI2 356 aa15.16■□□□□ 0.02
VSX1-202ENST00000376709 SLC25A34Q6PIV7 304 aa15.16■□□□□ 0.02
VSX1-202ENST00000376709 RNF152Q8N8N0 203 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms