RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 IGHV3-11P01762 117 aa8.05□□□□□ -1.12
PTCH1-204ENST00000375290 FUSP35637 526 aaKnown RBP eCLIP8.05□□□□□ -1.12
PTCH1-204ENST00000375290 Q0VFX4 171 aa8.05□□□□□ -1.12
PTCH1-204ENST00000375290 CFHR4Q92496 578 aa8.05□□□□□ -1.12
PTCH1-204ENST00000375290 TMEM89A2RUT3 159 aa8.05□□□□□ -1.12
PTCH1-204ENST00000375290 IGHG2P01859 326 aa8.05□□□□□ -1.12
PTCH1-204ENST00000375290 GVINP1Q7Z2Y8 2422 aa8.05□□□□□ -1.12
PTCH1-204ENST00000375290 RSPO4Q2I0M5 234 aaPredicted RBP8.05□□□□□ -1.12
PTCH1-204ENST00000375290 LINC00574Q9H8X3 128 aa8.05□□□□□ -1.12
PTCH1-204ENST00000375290 ROS1P08922 2347 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 C9orf47Q6ZRZ4 202 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 TMEM256-PLSCR3K7ERE1 68 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 RMI2Q96E14 147 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 CRLF1O75462 422 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 C16orf54Q6UWD8 224 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 WDR86Q86TI4 376 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 C19orf71A6NCJ1 209 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 ELANEP08246 267 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 SAA4P35542 130 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 IGKV3D-20A0A0C4DH25 116 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 P0C879 139 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 FAM120AOSQ5T036 256 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 COL4A4P53420 1690 aaPredicted RBP8.04□□□□□ -1.12
PTCH1-204ENST00000375290 ODF1Q14990 250 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 RNF114Q9Y508 228 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 Q6Q795 121 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 Q8N1Y9 231 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 GTSF1Q8WW33 167 aa8.04□□□□□ -1.12
PTCH1-204ENST00000375290 IGHV7-4-1A0A0J9YVY3 117 aa8.03□□□□□ -1.12
PTCH1-204ENST00000375290 EGR2P11161 476 aaPredicted RBP8.03□□□□□ -1.12
PTCH1-204ENST00000375290 TRAV13-1A0A0B4J241 112 aa8.03□□□□□ -1.12
PTCH1-204ENST00000375290 BAALC-AS2P0C853 105 aa8.03□□□□□ -1.12
PTCH1-204ENST00000375290 P0DMU3 169 aa8.03□□□□□ -1.12
PTCH1-204ENST00000375290 FAM231AP0DMU4 169 aa8.03□□□□□ -1.12
PTCH1-204ENST00000375290 FAM231CP0DMU5 169 aa8.03□□□□□ -1.12
PTCH1-204ENST00000375290 PCP2Q8IVA1 136 aa8.03□□□□□ -1.12
PTCH1-204ENST00000375290 EPOPA6NHQ4 379 aa8.03□□□□□ -1.12
PTCH1-204ENST00000375290 DUX4L9Q6RFH8 374 aaPredicted RBP8.03□□□□□ -1.12
PTCH1-204ENST00000375290 FAM167A-AS1Q96KT0 104 aa8.03□□□□□ -1.12
PTCH1-204ENST00000375290 K7ERJ3 54 aa8.03□□□□□ -1.12
PTCH1-204ENST00000375290 NDUFV3P56181 108 aaKnown RBP8.03□□□□□ -1.12
PTCH1-204ENST00000375290 ODF3Q96PU9 254 aa8.03□□□□□ -1.12
PTCH1-204ENST00000375290 CACNA1HO95180 2353 aa8.03□□□□□ -1.12
PTCH1-204ENST00000375290 TP73-AS1Q9UF72 201 aa8.02□□□□□ -1.12
PTCH1-204ENST00000375290 FAM236AA0A1B0GUQ0 79 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 FAM236BA0A1B0GV22 79 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 ZNF561-AS1K7EIQ3 104 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 LOXP28300 417 aaPredicted RBP8.02□□□□□ -1.13
PTCH1-204ENST00000375290 AMTNQ6UX39 209 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 A0A087WWL8 130 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 NDUFA11Q86Y39 141 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 Q6ZUT4 128 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 ZNF581Q9P0T4 197 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 NUP210LQ5VU65 1888 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 EP300Q09472 2414 aaPredicted RBP8.02□□□□□ -1.13
PTCH1-204ENST00000375290 ATP6V0E1O15342 81 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 PCNX2A6NKB5 2137 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 IGHV3OR16-8A0A075B7F1 116 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 C5orf47Q569G3 176 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 Q6ZR03 302 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 LINC01356Q8N9X3 169 aa8.02□□□□□ -1.13
PTCH1-204ENST00000375290 FXYD7P58549 80 aa8.01□□□□□ -1.13
PTCH1-204ENST00000375290 MORN5Q5VZ52 161 aa8.01□□□□□ -1.13
PTCH1-204ENST00000375290 PIP4P2Q8N4L2 257 aa8.01□□□□□ -1.13
PTCH1-204ENST00000375290 PKDREJQ9NTG1 2253 aa8.01□□□□□ -1.13
PTCH1-204ENST00000375290 IGHV1-58A0A0C4DH39 117 aa8.01□□□□□ -1.13
PTCH1-204ENST00000375290 FAM240AA0A1B0GVK7 77 aa8.01□□□□□ -1.13
PTCH1-204ENST00000375290 IGF2-ASQ6U949 168 aa8.01□□□□□ -1.13
PTCH1-204ENST00000375290 CRYGCP07315 174 aa8.01□□□□□ -1.13
PTCH1-204ENST00000375290 H7C423 109 aa8.01□□□□□ -1.13
PTCH1-204ENST00000375290 MDFICQ9P1T7 246 aa8.01□□□□□ -1.13
PTCH1-204ENST00000375290 OVOL3O00110 214 aa8.01□□□□□ -1.13
PTCH1-204ENST00000375290 RBM3P98179 157 aaKnown RBP8.01□□□□□ -1.13
PTCH1-204ENST00000375290 PROK2Q9HC23 129 aa8.01□□□□□ -1.13
PTCH1-204ENST00000375290 H3BUX3 64 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 CDPF1Q6NVV7 123 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 OPRPNQ99935 248 aaPredicted RBP8□□□□□ -1.13
PTCH1-204ENST00000375290 A0A0G2JNJ9 132 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 Q9UFV3 132 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 IGLV11-55A0A075B6I3 123 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 LGALS9O00182 355 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 I3L2K1 104 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 ANXA2RQ3ZCQ2 193 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 ATP1A1-AS1Q5TC04 95 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 ZFP2Q6ZN57 461 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 MUC7Q8TAX7 377 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 WI2-2373I1.2A0A1W2PRP0 233 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 HAMPP81172 84 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 DKK1O94907 266 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 LCNL1Q6ZST4 164 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 V9GYY9 64 aa8□□□□□ -1.13
PTCH1-204ENST00000375290 TANC2Q9HCD6 1990 aa7.99□□□□□ -1.13
PTCH1-204ENST00000375290 RBX1P62877 108 aa7.99□□□□□ -1.13
PTCH1-204ENST00000375290 FXYD2P54710 66 aa7.99□□□□□ -1.13
PTCH1-204ENST00000375290 NKAPP1Q8N9T2 125 aa7.99□□□□□ -1.13
PTCH1-204ENST00000375290 TDRG1Q3Y452 100 aa7.99□□□□□ -1.13
PTCH1-204ENST00000375290 K7EMT4 169 aa7.99□□□□□ -1.13
PTCH1-204ENST00000375290 MRPS36P82909 103 aaKnown RBP7.99□□□□□ -1.13
PTCH1-204ENST00000375290 MP68P56378 58 aa7.99□□□□□ -1.13
PTCH1-204ENST00000375290 A4D1N5 150 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms