RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 LINC00173Q6ZV60 143 aa18.81■□□□□ 0.6
RAPGEF1-203ENST00000372195 DEFB105AQ8NG35 78 aa18.8■□□□□ 0.6
RAPGEF1-203ENST00000372195 NCOR1P1Q9H4R4 102 aa18.8■□□□□ 0.6
RAPGEF1-203ENST00000372195 C15orf53Q8NAA6 179 aa18.8■□□□□ 0.6
RAPGEF1-203ENST00000372195 IGHV4-4A0A075B6R2 117 aa18.8■□□□□ 0.6
RAPGEF1-203ENST00000372195 CGB3P0DN86 165 aa18.8■□□□□ 0.6
RAPGEF1-203ENST00000372195 HOXD3P31249 432 aaPredicted RBP18.8■□□□□ 0.6
RAPGEF1-203ENST00000372195 KLF5Q13887 457 aaPredicted RBP18.8■□□□□ 0.6
RAPGEF1-203ENST00000372195 NTN5Q8WTR8 489 aaPredicted RBP18.8■□□□□ 0.6
RAPGEF1-203ENST00000372195 AGPAT4-IT1Q9H0P7 198 aa18.8■□□□□ 0.6
RAPGEF1-203ENST00000372195 TRACP01848 142 aa18.79■□□□□ 0.6
RAPGEF1-203ENST00000372195 MRPL53Q96EL3 112 aaKnown RBP18.79■□□□□ 0.6
RAPGEF1-203ENST00000372195 U3KQE9 123 aa18.79■□□□□ 0.6
RAPGEF1-203ENST00000372195 UBL5Q9BZL1 73 aa18.79■□□□□ 0.6
RAPGEF1-203ENST00000372195 DEFB112Q30KQ8 113 aa18.79■□□□□ 0.6
RAPGEF1-203ENST00000372195 TDRG1Q3Y452 100 aa18.79■□□□□ 0.6
RAPGEF1-203ENST00000372195 ARFGEF3Q5TH69 2177 aa18.78■□□□□ 0.6
RAPGEF1-203ENST00000372195 ANAPC1Q9H1A4 1944 aa18.78■□□□□ 0.6
RAPGEF1-203ENST00000372195 IL15RAQ13261 267 aa18.78■□□□□ 0.6
RAPGEF1-203ENST00000372195 SS18L2Q9UHA2 77 aa18.78■□□□□ 0.6
RAPGEF1-203ENST00000372195 CRYGCP07315 174 aa18.77■□□□□ 0.6
RAPGEF1-203ENST00000372195 ZNF407Q9C0G0 2248 aa18.77■□□□□ 0.6
RAPGEF1-203ENST00000372195 WIPF2Q8TF74 440 aaPredicted RBP18.77■□□□□ 0.6
RAPGEF1-203ENST00000372195 PLA2G2EQ9NZK7 142 aa18.77■□□□□ 0.6
RAPGEF1-203ENST00000372195 CRYBA4P53673 196 aa18.77■□□□□ 0.59
RAPGEF1-203ENST00000372195 WT1P19544 449 aaPredicted RBP18.76■□□□□ 0.59
RAPGEF1-203ENST00000372195 DSCR8Q96T75 97 aa18.76■□□□□ 0.59
RAPGEF1-203ENST00000372195 PYGO2Q9BRQ0 406 aa18.76■□□□□ 0.59
RAPGEF1-203ENST00000372195 SH2D6Q7Z4S9 175 aa18.76■□□□□ 0.59
RAPGEF1-203ENST00000372195 ZNF747Q9BV97 191 aa18.76■□□□□ 0.59
RAPGEF1-203ENST00000372195 IGHG4P01861 327 aa18.76■□□□□ 0.59
RAPGEF1-203ENST00000372195 HERVK_113P63121 156 aa18.76■□□□□ 0.59
RAPGEF1-203ENST00000372195 SLURP1P55000 103 aa18.75■□□□□ 0.59
RAPGEF1-203ENST00000372195 DOCK10Q96BY6 2186 aa18.75■□□□□ 0.59
RAPGEF1-203ENST00000372195 UTF1Q5T230 341 aa18.75■□□□□ 0.59
RAPGEF1-203ENST00000372195 PLA2G2CQ5R387 149 aa18.74■□□□□ 0.59
RAPGEF1-203ENST00000372195 MSRB1Q9NZV6 116 aa18.74■□□□□ 0.59
RAPGEF1-203ENST00000372195 APOC4P55056 127 aa18.74■□□□□ 0.59
RAPGEF1-203ENST00000372195 ANKRD29Q8N6D5 301 aa18.73■□□□□ 0.59
RAPGEF1-203ENST00000372195 C20orf78Q9BR46 151 aa18.73■□□□□ 0.59
RAPGEF1-203ENST00000372195 IGKV1OR2-108A0A075B7D4 117 aa18.73■□□□□ 0.59
RAPGEF1-203ENST00000372195 TAL2Q16559 108 aa18.73■□□□□ 0.59
RAPGEF1-203ENST00000372195 Q9H8V8 135 aa18.73■□□□□ 0.59
RAPGEF1-203ENST00000372195 IGHV4-38-2P0DP08 117 aa18.72■□□□□ 0.59
RAPGEF1-203ENST00000372195 COL6A6A6NMZ7 2263 aa18.72■□□□□ 0.59
RAPGEF1-203ENST00000372195 TRAV13-2A0A0B4J235 113 aa18.71■□□□□ 0.59
RAPGEF1-203ENST00000372195 LYPD6BQ8NI32 183 aa18.71■□□□□ 0.59
RAPGEF1-203ENST00000372195 hADV29S1A0JD25 119 aa18.71■□□□□ 0.59
RAPGEF1-203ENST00000372195 SIVA1O15304 175 aa18.7■□□□□ 0.58
RAPGEF1-203ENST00000372195 C5orf38Q86SI9 138 aa18.7■□□□□ 0.58
RAPGEF1-203ENST00000372195 CGB7P0DN87 165 aa18.7■□□□□ 0.58
RAPGEF1-203ENST00000372195 Q9HAA7 133 aa18.7■□□□□ 0.58
RAPGEF1-203ENST00000372195 IGKV2D-24A0A075B6R9 120 aa18.69■□□□□ 0.58
RAPGEF1-203ENST00000372195 FOXI2Q6ZQN5 318 aa18.69■□□□□ 0.58
RAPGEF1-203ENST00000372195 CADP27708 2225 aa18.69■□□□□ 0.58
RAPGEF1-203ENST00000372195 PRB2P02812 416 aaPredicted RBP18.69■□□□□ 0.58
RAPGEF1-203ENST00000372195 DENND4CQ5VZ89 1909 aa18.68■□□□□ 0.58
RAPGEF1-203ENST00000372195 B5MCH6 92 aa18.68■□□□□ 0.58
RAPGEF1-203ENST00000372195 ESM1Q9NQ30 184 aa18.68■□□□□ 0.58
RAPGEF1-203ENST00000372195 GVINP1Q7Z2Y8 2422 aa18.68■□□□□ 0.58
RAPGEF1-203ENST00000372195 IGLV10-54A0A075B6I4 117 aa18.67■□□□□ 0.58
RAPGEF1-203ENST00000372195 CFC1BP0CG36 223 aa18.67■□□□□ 0.58
RAPGEF1-203ENST00000372195 CFC1P0CG37 223 aa18.67■□□□□ 0.58
RAPGEF1-203ENST00000372195 KAAG1Q9UBP8 84 aa18.67■□□□□ 0.58
RAPGEF1-203ENST00000372195 POU2AF1Q16633 256 aa18.67■□□□□ 0.58
RAPGEF1-203ENST00000372195 BAALC-AS2P0C853 105 aa18.67■□□□□ 0.58
RAPGEF1-203ENST00000372195 NRGNQ92686 78 aa18.66■□□□□ 0.58
RAPGEF1-203ENST00000372195 PATE2Q6UY27 113 aa18.66■□□□□ 0.58
RAPGEF1-203ENST00000372195 I3L2K1 104 aa18.66■□□□□ 0.58
RAPGEF1-203ENST00000372195 LHBP01229 141 aa18.66■□□□□ 0.58
RAPGEF1-203ENST00000372195 GP9P14770 177 aa18.66■□□□□ 0.58
RAPGEF1-203ENST00000372195 PLA2G5P39877 138 aa18.66■□□□□ 0.58
RAPGEF1-203ENST00000372195 BOD1L2Q8IYS8 172 aa18.65■□□□□ 0.58
RAPGEF1-203ENST00000372195 J3QLI3 93 aa18.65■□□□□ 0.58
RAPGEF1-203ENST00000372195 DEFB1P60022 68 aa18.65■□□□□ 0.58
RAPGEF1-203ENST00000372195 KIR2DL5BA0A0G2JN68 375 aa18.65■□□□□ 0.58
RAPGEF1-203ENST00000372195 KIR2DL5BA0A0G2JPC4 375 aa18.65■□□□□ 0.58
RAPGEF1-203ENST00000372195 CCL24O00175 119 aa18.65■□□□□ 0.58
RAPGEF1-203ENST00000372195 BLCAPP62952 87 aa18.65■□□□□ 0.58
RAPGEF1-203ENST00000372195 KIR2DL5AQ8N109 375 aa18.65■□□□□ 0.58
RAPGEF1-203ENST00000372195 SPTBN2O15020 2390 aa18.65■□□□□ 0.58
RAPGEF1-203ENST00000372195 DAND5Q8N907 189 aa18.65■□□□□ 0.58
RAPGEF1-203ENST00000372195 USF3Q68DE3 2245 aa18.65■□□□□ 0.58
RAPGEF1-203ENST00000372195 ANKRD39Q53RE8 183 aa18.64■□□□□ 0.57
RAPGEF1-203ENST00000372195 IGHV7-81A0A0B4J1V7 117 aa18.64■□□□□ 0.57
RAPGEF1-203ENST00000372195 ROS1P08922 2347 aa18.64■□□□□ 0.57
RAPGEF1-203ENST00000372195 EP300Q09472 2414 aaPredicted RBP18.64■□□□□ 0.57
RAPGEF1-203ENST00000372195 TEX48A0A1B0GUV7 120 aa18.64■□□□□ 0.57
RAPGEF1-203ENST00000372195 ZNF493Q6ZR52 646 aa18.64■□□□□ 0.57
RAPGEF1-203ENST00000372195 TTTY13Q9BZ97 58 aa18.64■□□□□ 0.57
RAPGEF1-203ENST00000372195 ELANEP08246 267 aa18.63■□□□□ 0.57
RAPGEF1-203ENST00000372195 CENPVL3A0A0U1RRI6 287 aa18.63■□□□□ 0.57
RAPGEF1-203ENST00000372195 SPTBN1Q01082 2364 aaKnown RBP18.63■□□□□ 0.57
RAPGEF1-203ENST00000372195 PRAC2D3DTV9 90 aa18.63■□□□□ 0.57
RAPGEF1-203ENST00000372195 NDUFS5O43920 106 aa18.63■□□□□ 0.57
RAPGEF1-203ENST00000372195 AJUBAQ96IF1 538 aa18.63■□□□□ 0.57
RAPGEF1-203ENST00000372195 NOTCH4Q99466 2003 aa18.63■□□□□ 0.57
RAPGEF1-203ENST00000372195 VPREB3Q9UKI3 123 aa18.63■□□□□ 0.57
RAPGEF1-203ENST00000372195 IGHV4-61A0A0C4DH41 118 aa18.62■□□□□ 0.57
RAPGEF1-203ENST00000372195 K7EIM0 57 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms