RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 SAMD5Q5TGI4 173 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 FAM104BQ5XKR9 115 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 DAZ1Q9NQZ3 744 aaKnown RBP7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 SIGLEC8Q9NYZ4 499 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 LY96Q9Y6Y9 160 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 IGHV2-70DA0A0C4DH43 119 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 H7C1H1 209 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 OVOL1O14753 267 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 Q0VG73 95 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 KIR3DS1Q14943 382 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 Q6ZSR3 168 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 RNF5Q99942 180 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 AGPAT4-IT1Q9H0P7 198 aa7.15□□□□□ -1.26
SMARCA1-202ENST00000371122 C9orf139Q6ZV77 190 aa7.15□□□□□ -1.27
SMARCA1-202ENST00000371122 MS4A6AQ9H2W1 248 aa7.15□□□□□ -1.27
SMARCA1-202ENST00000371122 K7EIM0 57 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 SNCGO76070 127 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 ZNF415Q09FC8 603 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 IGFL2Q6UWQ7 119 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 Q96MF0 132 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 IGHV4-30-2A0A087WSY4 118 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 A0A096LPF7 62 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 TRBV7-1A0A0A6YYK4 115 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 PAX1P15863 534 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 HECTD1Q9ULT8 2610 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 K7ERJ3 54 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 ORMDL2Q53FV1 153 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 AMTNQ6UX39 209 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 DPH3P1Q9H4G8 78 aa7.14□□□□□ -1.27
SMARCA1-202ENST00000371122 ADORA2A-AS1P86434 159 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 DTX2Q86UW9 622 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 DPH3Q96FX2 82 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 FAM167A-AS1Q96KT0 104 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 MRPL35Q9NZE8 188 aaKnown RBP7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 MRPL27Q9P0M9 148 aaKnown RBP7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 POU2AF1Q16633 256 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 CR1LQ2VPA4 569 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 PAPPA-AS1Q5QFB9 102 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 C11orf52Q96A22 123 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 PTPRBP23467 1997 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 ATMQ13315 3056 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 F8P00451 2351 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 IGHV7-81A0A0B4J1V7 117 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 SMIM27A0A1W2PRY6 76 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 H3BRN7 92 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 TCTEX1D4Q5JR98 221 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 C2orf66Q6UXQ4 117 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 FAM110DQ8TAY7 271 aaPredicted RBP7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 C2orf88Q9BSF0 95 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 PEMTQ9UBM1 199 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 MAST4O15021 2626 aa7.13□□□□□ -1.27
SMARCA1-202ENST00000371122 TRAV8-2A0A0B4J237 113 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 TRBV7-9A0A0J9YWB2 115 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 OOSP1A8MZH6 123 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 HOXA3O43365 443 aaPredicted RBP7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 DEFB112Q30KQ8 113 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 PCP2Q8IVA1 136 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 LINC00311Q8N616 119 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 TP53TG1Q9Y2A0 90 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 DMXL1Q9Y485 3027 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 FNDC10F2Z333 226 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 LINC00322Q6ZN03 302 aaPredicted RBP7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 CFHR4Q92496 578 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 GTSF1LQ9H1H1 148 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 KAAG1Q9UBP8 84 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 FAM231BA6NCW3 169 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 Q8N7P7 452 aa7.12□□□□□ -1.27
SMARCA1-202ENST00000371122 GAGE12BA1L429 117 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 SLC25A16P16260 332 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 GTSF1Q8WW33 167 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 TMEM101Q96IK0 257 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 DNAL4O96015 105 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 CTSGP08311 255 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 LYPD1Q8N2G4 141 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 ZNF503Q96F45 646 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 DUSP14O95147 198 aaKnown RBP7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 TRBV12-3P01733 135 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 HSD52Q0P140 79 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 SPOCK3Q9BQ16 436 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 C11orf1Q9H5F2 150 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 PGPEP1Q9NXJ5 209 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 GAGE12JA6NER3 117 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 GAGE1Q13065 139 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 GAGE4Q13068 117 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 GAGE5Q13069 117 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 GAGE13Q4V321 117 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 CHAC1Q9BUX1 264 aa7.11□□□□□ -1.27
SMARCA1-202ENST00000371122 ZNF292O60281 2723 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 SDHAF1A6NFY7 115 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 I3L2K1 104 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 HIST2H2BCQ6DN03 193 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 OR5A1Q8NGJ0 315 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 AKAP13Q12802 2813 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 SCGB1A1P11684 91 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 PDE6HQ13956 83 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 DAZAP2Q15038 168 aaPredicted RBP7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 APRG1Q8IVJ8 170 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 THAP8Q8NA92 274 aa7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 RPL39LQ96EH5 51 aaKnown RBP7.1□□□□□ -1.27
SMARCA1-202ENST00000371122 C20orf144Q9BQM9 153 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms